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The map label for this gene is ynhG [H]

Identifier: 34497388

GI number: 34497388

Start: 2103090

End: 2103995

Strand: Direct

Name: ynhG [H]

Synonym: CV_1933

Alternate gene names: 34497388

Gene position: 2103090-2103995 (Clockwise)

Preceding gene: 34497382

Following gene: 34497391

Centisome position: 44.27

GC content: 69.09

Gene sequence:

>906_bases
ATGTTGAAGCGGTTGTCGTTGCTGGCGCTGGGATGGTGGCTGGCGGTTCCCGTGCAGGCGGCGGTGATGCCCGCGCCGGA
TGTCGCGGTCAATCCCATCGGCCGGCATTTGGTGCTGAACTTGCCGCAGGCGCGGCTGTTCCTGTACCAGGACGGCAAGC
TGGCGCGGATTTTCCCGGTGGCGGTCGGCAAGATGCTGACCCAGACCCCGACCGGCAGTTTCGACATCACCGGCATCTAC
CGCGCGCCCAGCTGGCACGTGCCCAAGTCCATCCAGGAAGAGATGCGGCGCAGCGGCAAGGAAGTGCAGACCGTGGTGCC
GCCGGGCCCCAACAATCCGCTGGGCCCGGTTTTCGTGCGTTTCGGCGAGAGCAGCCTGGGCCTGGGTTTTCACGGCACCA
ACGCGCCCGGCTCGGTTCCGGGCTTCCGCAGCCACGGCTGCGTGCGGCTGCGCAACGACGACGCGCTGGAGCTGGCCAGG
ACCGTCAGCCGCGGCGACGCGGTCACCGTCGCCTACCAGACCATTCTGCTGAGCGAGGACGAAGCCGGCCAACTGTGGCT
GACCGTCTACCGCAATCATTACAAGCAGAGCGATCCGTCGCTGCCCTACCTGGCCGATACGTTGCTGGCCTGGCAGCGCC
AGCACCAGCAGGCCTTGTTCGGGCAGCGGGTGGACAGCGCGCTGAAGCAGCGCGACGGCAAACCGGTCTGTCTGAGCTGC
AAGAGCGGCAAGACGGAAGTCAGCGGCAGCCTGAGCGCGTTGCCATGGCTGTCCAGGCTGAATCCGCCCGCTCCGGTTCC
GACGCCCGCCGCGCCGGCGGCCAGCCAGCCGCAGCAGCAGGAGCGCGAGCCCGGTCCGCCGTCGGCCAAGGCCGGCCAGC
GCGCCCGCGCCGTCGCCAGGGGCTAA

Upstream 100 bases:

>100_bases
TCTCAAAAACCGGGGATTCTTGCTGGTTTTTTTACGATCCCGGAATTCCTGGCCTTTCTGTTAGAATCCGGATATGAGTC
ATGGTTACAGAAGGTGCGGT

Downstream 100 bases:

>100_bases
GAACGGCTAACAGAGCCCCTGACGCTGCGTTGCGCCGACTTGCCGTATTGCCTGTGCTGTCTGCGTCGGCGCGGCTTGCC
TCTGCCGTAAAACCGAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLKRLSLLALGWWLAVPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQDGKLARIFPVAVGKMLTQTPTGSFDITGIY
RAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRFGESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELAR
TVSRGDAVTVAYQTILLSEDEAGQLWLTVYRNHYKQSDPSLPYLADTLLAWQRQHQQALFGQRVDSALKQRDGKPVCLSC
KSGKTEVSGSLSALPWLSRLNPPAPVPTPAAPAASQPQQQEREPGPPSAKAGQRARAVARG

Sequences:

>Translated_301_residues
MLKRLSLLALGWWLAVPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQDGKLARIFPVAVGKMLTQTPTGSFDITGIY
RAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRFGESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELAR
TVSRGDAVTVAYQTILLSEDEAGQLWLTVYRNHYKQSDPSLPYLADTLLAWQRQHQQALFGQRVDSALKQRDGKPVCLSC
KSGKTEVSGSLSALPWLSRLNPPAPVPTPAAPAASQPQQQEREPGPPSAKAGQRARAVARG
>Mature_301_residues
MLKRLSLLALGWWLAVPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQDGKLARIFPVAVGKMLTQTPTGSFDITGIY
RAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVRFGESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELAR
TVSRGDAVTVAYQTILLSEDEAGQLWLTVYRNHYKQSDPSLPYLADTLLAWQRQHQQALFGQRVDSALKQRDGKPVCLSC
KSGKTEVSGSLSALPWLSRLNPPAPVPTPAAPAASQPQQQEREPGPPSAKAGQRARAVARG

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=216, Percent_Identity=31.4814814814815, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI1788299, Length=242, Percent_Identity=29.3388429752066, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787356, Length=231, Percent_Identity=26.8398268398268, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787040, Length=236, Percent_Identity=27.5423728813559, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 32606; Mature: 32606

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRLSLLALGWWLAVPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQDGKLARIFPV
CCCHHHHHHHHHHHHHHHHHEECCCCCCEECCCCCEEEEECCCCEEEEEECCCEEEEHHH
AVGKMLTQTPTGSFDITGIYRAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVR
HHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE
FGESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELARTVSRGDAVTVAYQTILLSED
ECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEEEEEEECCC
EAGQLWLTVYRNHYKQSDPSLPYLADTLLAWQRQHQQALFGQRVDSALKQRDGKPVCLSC
CCCCEEHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
KSGKTEVSGSLSALPWLSRLNPPAPVPTPAAPAASQPQQQEREPGPPSAKAGQRARAVAR
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCC
G
C
>Mature Secondary Structure
MLKRLSLLALGWWLAVPVQAAVMPAPDVAVNPIGRHLVLNLPQARLFLYQDGKLARIFPV
CCCHHHHHHHHHHHHHHHHHEECCCCCCEECCCCCEEEEECCCCEEEEEECCCEEEEHHH
AVGKMLTQTPTGSFDITGIYRAPSWHVPKSIQEEMRRSGKEVQTVVPPGPNNPLGPVFVR
HHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEE
FGESSLGLGFHGTNAPGSVPGFRSHGCVRLRNDDALELARTVSRGDAVTVAYQTILLSED
ECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCEEEEEEEEEEECCC
EAGQLWLTVYRNHYKQSDPSLPYLADTLLAWQRQHQQALFGQRVDSALKQRDGKPVCLSC
CCCCEEHEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
KSGKTEVSGSLSALPWLSRLNPPAPVPTPAAPAASQPQQQEREPGPPSAKAGQRARAVAR
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]