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The map label for this gene is trg [C]

Identifier: 34497371

GI number: 34497371

Start: 2081727

End: 2083046

Strand: Reverse

Name: trg [C]

Synonym: CV_1916

Alternate gene names: 34497371

Gene position: 2083046-2081727 (Counterclockwise)

Preceding gene: 34497375

Following gene: 34497368

Centisome position: 43.84

GC content: 67.12

Gene sequence:

>1320_bases
ATGTGGCTTGTAGGCAACAAGATGATCGATCAACTCGAAAACGCCGCGGAGGCCGTGCTGCGCGGCGAATCGGCCACATG
GAGGATAGACGGCAGCGACCGCTGGCGCGCGCTGGGAGAAAAGCTGTCCCAGGTCTGGGAGCAGCGCGACCTTCAGATCA
GCCAGGCCGACCGCGAGCGCGAGCAAGCCGACAGCAAGCTGCGCCAACTGCAGCAACGGCAAGAGGAGGCGGAGCGCCAG
CTGGAACTGCTGAACACGCGCTTCGATCTGGTCAACCGCGCCGCCAGCGAAGGATTGTGGGACATGTCGGTGGTGGCCGG
CGATCCGCTCAATCCCGACAACGTGTTCTGGTGGTCGCAAACCTTCCGCGCGCTGCTGGGTTTTCACGATCACAGGGAGT
TTCCGGACGTGCTGGGCAGCTGGGCCGGCCGGCTGCACCCGGAAGACCGGCAACGGGTGCTGGACGCCTTCGCCGCGCAC
CTGAACGACCGCGGCGGCACCACGCCATACGACATTGAATACCGGCTGCAATGCAAAAACGGCGATTACCGCTGGTTTCG
CGCCCGCGGCGCCACGCTGCGGGACGGCAAGGGCGTGCCCCTGCGCGTCGCCGGCTCGCTGGCCGACATCACGGCCCTGC
GCCGGCAACAGCTGCAGCTGGAGCGCACCATGACGCGCTTCGAGCTGGCCAGTGAAATGCTGGCCGAGGGGCTATGGGAC
ATGGAGGTCGATCCGGCCAACCCGGTCAGCGGCGCGCATGCCTTCTGGTGGTCGCCCCAGTTCCGCCGACTGTTGGGCTT
CGACAGCGAGCAGGAATTCCCCGACGTGCTGGAGAGCTGGTCCAGCCGGCTGCATCCCGAAGACAAGCAGACGGTGCTGG
ACGCCTTCGCCGCCCATCTGGGCGACCGCAGCGGCCAGACGCCCTACGACCTCGACTACCGGCTGCAATGCAAGAACGGC
GAATACCGCTGGTTCCACGCCCGCGGCCAGACCCGGCGCGCGGCGGACGGCGCGCCTTTGCGGGTGGTCGGCGCGCTGAT
AGACATAGACGCGGAAAAACGCTCGGAAGCGCTGAGCGGCGAAAGCCTGCAGCGGCAGCAGCTGGAGCGCAGCCTGGCCG
AGATCGCCACCATCGTCAGCACCATCCAGTCCATCGCCGATCAGACCAATCTGCTGGCATTGAATGCCGCGATCGAGGCC
GCCCGCGCCGGCGAAACCGGCCGCGGCTTCGCCGTGGTGGCGGACGAAGTGCGCAAGCTGGCCGAACGCACCCGCGACGC
GACGCAAAGAGTGGAAAAGCTGGTGGCGCAGCGCGACTGA

Upstream 100 bases:

>100_bases
CCCACATTCCCGCCCGCGGCAAGCGCCGTATTTATACATATTTCATGAGAAACCGCCGCCGCTATGCTTAAAGCCTGACC
TTCACCTCCGGAGCGATGCC

Downstream 100 bases:

>100_bases
ACCCATCTATTTGCCAAAGCAAAAGCCCGGCTCATGGCCGGGCTTTTTCGTGAACAACGCTGCCGTCAACGGTAGACGAA
GCGCGCGCGCTTGACGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFE [H]

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MWLVGNKMIDQLENAAEAVLRGESATWRIDGSDRWRALGEKLSQVWEQRDLQISQADREREQADSKLRQLQQRQEEAERQ
LELLNTRFDLVNRAASEGLWDMSVVAGDPLNPDNVFWWSQTFRALLGFHDHREFPDVLGSWAGRLHPEDRQRVLDAFAAH
LNDRGGTTPYDIEYRLQCKNGDYRWFRARGATLRDGKGVPLRVAGSLADITALRRQQLQLERTMTRFELASEMLAEGLWD
MEVDPANPVSGAHAFWWSPQFRRLLGFDSEQEFPDVLESWSSRLHPEDKQTVLDAFAAHLGDRSGQTPYDLDYRLQCKNG
EYRWFHARGQTRRAADGAPLRVVGALIDIDAEKRSEALSGESLQRQQLERSLAEIATIVSTIQSIADQTNLLALNAAIEA
ARAGETGRGFAVVADEVRKLAERTRDATQRVEKLVAQRD

Sequences:

>Translated_439_residues
MWLVGNKMIDQLENAAEAVLRGESATWRIDGSDRWRALGEKLSQVWEQRDLQISQADREREQADSKLRQLQQRQEEAERQ
LELLNTRFDLVNRAASEGLWDMSVVAGDPLNPDNVFWWSQTFRALLGFHDHREFPDVLGSWAGRLHPEDRQRVLDAFAAH
LNDRGGTTPYDIEYRLQCKNGDYRWFRARGATLRDGKGVPLRVAGSLADITALRRQQLQLERTMTRFELASEMLAEGLWD
MEVDPANPVSGAHAFWWSPQFRRLLGFDSEQEFPDVLESWSSRLHPEDKQTVLDAFAAHLGDRSGQTPYDLDYRLQCKNG
EYRWFHARGQTRRAADGAPLRVVGALIDIDAEKRSEALSGESLQRQQLERSLAEIATIVSTIQSIADQTNLLALNAAIEA
ARAGETGRGFAVVADEVRKLAERTRDATQRVEKLVAQRD
>Mature_439_residues
MWLVGNKMIDQLENAAEAVLRGESATWRIDGSDRWRALGEKLSQVWEQRDLQISQADREREQADSKLRQLQQRQEEAERQ
LELLNTRFDLVNRAASEGLWDMSVVAGDPLNPDNVFWWSQTFRALLGFHDHREFPDVLGSWAGRLHPEDRQRVLDAFAAH
LNDRGGTTPYDIEYRLQCKNGDYRWFRARGATLRDGKGVPLRVAGSLADITALRRQQLQLERTMTRFELASEMLAEGLWD
MEVDPANPVSGAHAFWWSPQFRRLLGFDSEQEFPDVLESWSSRLHPEDKQTVLDAFAAHLGDRSGQTPYDLDYRLQCKNG
EYRWFHARGQTRRAADGAPLRVVGALIDIDAEKRSEALSGESLQRQQLERSLAEIATIVSTIQSIADQTNLLALNAAIEA
ARAGETGRGFAVVADEVRKLAERTRDATQRVEKLVAQRD

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787690, Length=90, Percent_Identity=48.8888888888889, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI2367378, Length=68, Percent_Identity=58.8235294117647, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788195, Length=62, Percent_Identity=62.9032258064516, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788194, Length=70, Percent_Identity=57.1428571428571, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789453, Length=61, Percent_Identity=63.9344262295082, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR013655 [H]

Pfam domain/function: PF08447 PAS_3 [H]

EC number: NA

Molecular weight: Translated: 50005; Mature: 50005

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLVGNKMIDQLENAAEAVLRGESATWRIDGSDRWRALGEKLSQVWEQRDLQISQADRER
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EQADSKLRQLQQRQEEAERQLELLNTRFDLVNRAASEGLWDMSVVAGDPLNPDNVFWWSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCCCCEEHHHH
TFRALLGFHDHREFPDVLGSWAGRLHPEDRQRVLDAFAAHLNDRGGTTPYDIEYRLQCKN
HHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC
GDYRWFRARGATLRDGKGVPLRVAGSLADITALRRQQLQLERTMTRFELASEMLAEGLWD
CCEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MEVDPANPVSGAHAFWWSPQFRRLLGFDSEQEFPDVLESWSSRLHPEDKQTVLDAFAAHL
CCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GDRSGQTPYDLDYRLQCKNGEYRWFHARGQTRRAADGAPLRVVGALIDIDAEKRSEALSG
CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCC
ESLQRQQLERSLAEIATIVSTIQSIADQTNLLALNAAIEAARAGETGRGFAVVADEVRKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHH
AERTRDATQRVEKLVAQRD
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWLVGNKMIDQLENAAEAVLRGESATWRIDGSDRWRALGEKLSQVWEQRDLQISQADRER
CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
EQADSKLRQLQQRQEEAERQLELLNTRFDLVNRAASEGLWDMSVVAGDPLNPDNVFWWSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCCCCEEHHHH
TFRALLGFHDHREFPDVLGSWAGRLHPEDRQRVLDAFAAHLNDRGGTTPYDIEYRLQCKN
HHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECC
GDYRWFRARGATLRDGKGVPLRVAGSLADITALRRQQLQLERTMTRFELASEMLAEGLWD
CCEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
MEVDPANPVSGAHAFWWSPQFRRLLGFDSEQEFPDVLESWSSRLHPEDKQTVLDAFAAHL
CCCCCCCCCCCCCEEECCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
GDRSGQTPYDLDYRLQCKNGEYRWFHARGQTRRAADGAPLRVVGALIDIDAEKRSEALSG
CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCC
ESLQRQQLERSLAEIATIVSTIQSIADQTNLLALNAAIEAARAGETGRGFAVVADEVRKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCCCHHHHHHHHHHH
AERTRDATQRVEKLVAQRD
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2013568 [H]