| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497340
Identifier: 34497340
GI number: 34497340
Start: 2046772
End: 2048121
Strand: Direct
Name: 34497340
Synonym: CV_1885
Alternate gene names: NA
Gene position: 2046772-2048121 (Clockwise)
Preceding gene: 34497339
Following gene: 34497341
Centisome position: 43.08
GC content: 66.37
Gene sequence:
>1350_bases ATGGCGCATGCGGGTGTTGGGCAATTGCAGGGCGGGGCGGCGGCGGGCGCGGGATTCAACCGCCTGGCCCACCTGATGGC GATAGGCATCGTGATCGTCGCCGAACTGATCTACGTGCAGAAGTTTTCGGTAGGCAAGGGCAGCGTCATCCTGCTGCCGC TGTTGTACGCCTTCGTGCTGGGCATGATGTGCAATCCCGGCGTCAATCCGCTGGCCGGGCGCTGGGTCAGCCGCGACGTC AGCGCCACGCTGAGCCAGGTGATCATCATCGCGGTGCTGCCGCTGGTGGCCAAGCTGGCCACGTTGCTGGGGCCGCAGTT CCAGGCCATCGTCGCCGCCGGGCCGGTGCTGATCTTCCACGAGTTGGGCAATGTCGCCACCGCGCTGGTGGCGATGCCGG TGGCGGTGCTGTTGTTCCGCATGGGGCGCGAGGCGGTGGGCGCGACGTTTTCCATCGACCGCGAACCCAATATCGCGGTG ATCTCCGAACGTTATGGACTGCGCAGCCCGGAAGGCATGGGCGCGCTCAGCGTCTACGCGATCGGCACTATGTTCGGCAC CATTTTCTTCTCGCTGATCGTGCCGGTGGTGCACGCCTGGAACCTGTTCAGCGACAAGGCGCTGGCCATCGCCTGCGGCG TCGGCAGCGGCAGCATGATGGCGGCCTGCGCCGGCACCCTGATCACCGCCCTGCCGGAGCAGAAGGACACGCTGATGGCG CTGGCGGCGGCCAGCAACCTGCTGACCACCACCACCGGGGTGCTGTTTGGCATCTACGTGGCGCTGCCTTTCGCCAACCG CTTGTACGCGTTGCTGAGCCGCCTGCGCGCCCCGCGGCCGCAAGCCGCCATCCGAATGGATGCGGCCGACGCCGAGCTGC TGAAATCGGAAGAGCCCGAGCTGGGGCTGGGCGCTTTCGCCGCCAACCTGCTGATGGCCGGCGCCATCATCGTGCTCAGC CACCTGATCGGTCCCAAAAAGGAACTGGCCGCGGTGCTGCCGGGCGTGGCGATGGTGCTGGGCATCTGCTTCGCCAGCCG CCTGCTCAGCCGCTGGCTGCCGCTGAAGATTCCGACGCTGATCTGGCTGTCCATCCTGGGCGTGCTGGCAAGCCTGCCGG GCTTGCCCGGCGGCGAGTGGCGCAACCAGTGCTTCAGCCAGGTCGATGTGCTAGCTTGCGCGACGCTGGTGCTGGCCTAT GCCGGCCTGGCCGTCACGCGGCGCGAGGCGGCCATTTTCAAGCGCGATGGCCTCCGCCTGCTGGTGATCGCCATCCTGGT GTTCAGCGGCACCTTCCTTGGCTCTGCCTTGGTCAGCGATATTTTGTTTTCCTTGAAATTTGGGCATTGA
Upstream 100 bases:
>100_bases GATCAGGCGCTGGCGATAGGCGCCGCGTACTGGATCAAACTGGTGGAAACCGCTTTGGCCCCGGCGGCCAAACCGACGGA ACGATAACGGGAAGAAGAGC
Downstream 100 bases:
>100_bases TTGCCAAGCTGTGGGCATTAAATTTAGTAAAGTTGCTCGGGTTAATGTAATGGCTTTGTAAACAATCAAGCTTGGCTTAA TAAAAATTAAGTCAAGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MAHAGVGQLQGGAAAGAGFNRLAHLMAIGIVIVAELIYVQKFSVGKGSVILLPLLYAFVLGMMCNPGVNPLAGRWVSRDV SATLSQVIIIAVLPLVAKLATLLGPQFQAIVAAGPVLIFHELGNVATALVAMPVAVLLFRMGREAVGATFSIDREPNIAV ISERYGLRSPEGMGALSVYAIGTMFGTIFFSLIVPVVHAWNLFSDKALAIACGVGSGSMMAACAGTLITALPEQKDTLMA LAAASNLLTTTTGVLFGIYVALPFANRLYALLSRLRAPRPQAAIRMDAADAELLKSEEPELGLGAFAANLLMAGAIIVLS HLIGPKKELAAVLPGVAMVLGICFASRLLSRWLPLKIPTLIWLSILGVLASLPGLPGGEWRNQCFSQVDVLACATLVLAY AGLAVTRREAAIFKRDGLRLLVIAILVFSGTFLGSALVSDILFSLKFGH
Sequences:
>Translated_449_residues MAHAGVGQLQGGAAAGAGFNRLAHLMAIGIVIVAELIYVQKFSVGKGSVILLPLLYAFVLGMMCNPGVNPLAGRWVSRDV SATLSQVIIIAVLPLVAKLATLLGPQFQAIVAAGPVLIFHELGNVATALVAMPVAVLLFRMGREAVGATFSIDREPNIAV ISERYGLRSPEGMGALSVYAIGTMFGTIFFSLIVPVVHAWNLFSDKALAIACGVGSGSMMAACAGTLITALPEQKDTLMA LAAASNLLTTTTGVLFGIYVALPFANRLYALLSRLRAPRPQAAIRMDAADAELLKSEEPELGLGAFAANLLMAGAIIVLS HLIGPKKELAAVLPGVAMVLGICFASRLLSRWLPLKIPTLIWLSILGVLASLPGLPGGEWRNQCFSQVDVLACATLVLAY AGLAVTRREAAIFKRDGLRLLVIAILVFSGTFLGSALVSDILFSLKFGH >Mature_448_residues AHAGVGQLQGGAAAGAGFNRLAHLMAIGIVIVAELIYVQKFSVGKGSVILLPLLYAFVLGMMCNPGVNPLAGRWVSRDVS ATLSQVIIIAVLPLVAKLATLLGPQFQAIVAAGPVLIFHELGNVATALVAMPVAVLLFRMGREAVGATFSIDREPNIAVI SERYGLRSPEGMGALSVYAIGTMFGTIFFSLIVPVVHAWNLFSDKALAIACGVGSGSMMAACAGTLITALPEQKDTLMAL AAASNLLTTTTGVLFGIYVALPFANRLYALLSRLRAPRPQAAIRMDAADAELLKSEEPELGLGAFAANLLMAGAIIVLSH LIGPKKELAAVLPGVAMVLGICFASRLLSRWLPLKIPTLIWLSILGVLASLPGLPGGEWRNQCFSQVDVLACATLVLAYA GLAVTRREAAIFKRDGLRLLVIAILVFSGTFLGSALVSDILFSLKFGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47006; Mature: 46875
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAGVGQLQGGAAAGAGFNRLAHLMAIGIVIVAELIYVQKFSVGKGSVILLPLLYAFVL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH GMMCNPGVNPLAGRWVSRDVSATLSQVIIIAVLPLVAKLATLLGPQFQAIVAAGPVLIFH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHH ELGNVATALVAMPVAVLLFRMGREAVGATFSIDREPNIAVISERYGLRSPEGMGALSVYA HHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHH IGTMFGTIFFSLIVPVVHAWNLFSDKALAIACGVGSGSMMAACAGTLITALPEQKDTLMA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH LAAASNLLTTTTGVLFGIYVALPFANRLYALLSRLRAPRPQAAIRMDAADAELLKSEEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCHHHHHHHCCCCC LGLGAFAANLLMAGAIIVLSHLIGPKKELAAVLPGVAMVLGICFASRLLSRWLPLKIPTL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IWLSILGVLASLPGLPGGEWRNQCFSQVDVLACATLVLAYAGLAVTRREAAIFKRDGLRL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVIAILVFSGTFLGSALVSDILFSLKFGH HHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AHAGVGQLQGGAAAGAGFNRLAHLMAIGIVIVAELIYVQKFSVGKGSVILLPLLYAFVL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH GMMCNPGVNPLAGRWVSRDVSATLSQVIIIAVLPLVAKLATLLGPQFQAIVAAGPVLIFH HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHH ELGNVATALVAMPVAVLLFRMGREAVGATFSIDREPNIAVISERYGLRSPEGMGALSVYA HHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECCCCCEEEEECCCCCCCCCCCCHHHHHH IGTMFGTIFFSLIVPVVHAWNLFSDKALAIACGVGSGSMMAACAGTLITALPEQKDTLMA HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHH LAAASNLLTTTTGVLFGIYVALPFANRLYALLSRLRAPRPQAAIRMDAADAELLKSEEPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCHHHHHHHCCCCC LGLGAFAANLLMAGAIIVLSHLIGPKKELAAVLPGVAMVLGICFASRLLSRWLPLKIPTL CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IWLSILGVLASLPGLPGGEWRNQCFSQVDVLACATLVLAYAGLAVTRREAAIFKRDGLRL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LVIAILVFSGTFLGSALVSDILFSLKFGH HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA