The gene/protein map for NC_005085 is currently unavailable.
Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497331

Identifier: 34497331

GI number: 34497331

Start: 2037994

End: 2038821

Strand: Direct

Name: 34497331

Synonym: CV_1876

Alternate gene names: NA

Gene position: 2037994-2038821 (Clockwise)

Preceding gene: 34497330

Following gene: 34497332

Centisome position: 42.9

GC content: 58.33

Gene sequence:

>828_bases
CTGGAGTTTGATCCGTCCTCGCCGGGCCAGACCTTCATCTTTCACGCGGCTGACAATCCCGAGGGCGCGCGCGCCGGGTC
GCGAGCGGAGAGGGTGGCCGCCAGACTGCAACGCCGCTTCGACGACACTTCGCCTCGTTGTCCGGACGGGGAGCCGGCAT
GGCTGTGCTCCGGGCTGATCATGCGGGCGACTGCCAATTATCCCTTCACGCCTAATCCGAATAATCCCATCGCTTCGTTT
TCCTATCTGCGAAAGGATGCCGGAACGGTGAATATGTTCAAGCACCAGGGCATCATTCTCAAGCCGACTCCCGACTTGAT
GGAAAGAATGGCTTGCCTATATCCCATGGATGCCGACAGCTGGGCCACGCATGGCCGGATCGCCGGACATTATTACTGCA
ACACCCCGCTGCTGTCGCCGCATGATGAGGCGCATGGCGATTATAGCTCGTGCCATGCGGCGGGCATCGCAGCCCAGGGA
TTGTCCGGCAAAGAAATGTCATCGCGATTCCACGCAAAGTATTCGAGCGACCGCGATGCTCAGTGCTCGTTCAGCGTCAG
GGACCCGAATCAGTTCTATGCGGGCATTCTGGCCACGGTTTACAACAAGGTGTATTTCGGCTGGCTGGATTGGAACGAGT
TGATACTCAAACCTTGGAAATCGGAGGCGGACGTTCCCGAGATCGAGGCTTTCTTCTATTTCAAGGGAGATTCGGGCGCC
AAGAGCCTGGCGACGAGTTATGTCGGCAAGTACAAGCGACTGACGGGGCGGGACGTTCCCGCTTTGGCCGTCGATTTCCC
GCACGACCGGATCGAATTCGAAAAGTGA

Upstream 100 bases:

>100_bases
CATGGCCTTCGCGTATTGGAAAGGGGCGGAGGCCGGCAAGGAGAAGGCTGTCGACGACAGGGACGATTTTGTCGCCGAGT
CCGGGCGCTTGCTGCCGGTG

Downstream 100 bases:

>100_bases
GACAACTCGTGGCGCCGCGGAGGCCGGCGCCGAAAAAACATTGAGACGTCTCATCGTATTTTCCGCAAGCAATGGCTTCT
CTTCAGTTTTCTTTTCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEFDPSSPGQTFIFHAADNPEGARAGSRAERVAARLQRRFDDTSPRCPDGEPAWLCSGLIMRATANYPFTPNPNNPIASF
SYLRKDAGTVNMFKHQGIILKPTPDLMERMACLYPMDADSWATHGRIAGHYYCNTPLLSPHDEAHGDYSSCHAAGIAAQG
LSGKEMSSRFHAKYSSDRDAQCSFSVRDPNQFYAGILATVYNKVYFGWLDWNELILKPWKSEADVPEIEAFFYFKGDSGA
KSLATSYVGKYKRLTGRDVPALAVDFPHDRIEFEK

Sequences:

>Translated_275_residues
MEFDPSSPGQTFIFHAADNPEGARAGSRAERVAARLQRRFDDTSPRCPDGEPAWLCSGLIMRATANYPFTPNPNNPIASF
SYLRKDAGTVNMFKHQGIILKPTPDLMERMACLYPMDADSWATHGRIAGHYYCNTPLLSPHDEAHGDYSSCHAAGIAAQG
LSGKEMSSRFHAKYSSDRDAQCSFSVRDPNQFYAGILATVYNKVYFGWLDWNELILKPWKSEADVPEIEAFFYFKGDSGA
KSLATSYVGKYKRLTGRDVPALAVDFPHDRIEFEK
>Mature_275_residues
MEFDPSSPGQTFIFHAADNPEGARAGSRAERVAARLQRRFDDTSPRCPDGEPAWLCSGLIMRATANYPFTPNPNNPIASF
SYLRKDAGTVNMFKHQGIILKPTPDLMERMACLYPMDADSWATHGRIAGHYYCNTPLLSPHDEAHGDYSSCHAAGIAAQG
LSGKEMSSRFHAKYSSDRDAQCSFSVRDPNQFYAGILATVYNKVYFGWLDWNELILKPWKSEADVPEIEAFFYFKGDSGA
KSLATSYVGKYKRLTGRDVPALAVDFPHDRIEFEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30727; Mature: 30727

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDPSSPGQTFIFHAADNPEGARAGSRAERVAARLQRRFDDTSPRCPDGEPAWLCSGLI
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
MRATANYPFTPNPNNPIASFSYLRKDAGTVNMFKHQGIILKPTPDLMERMACLYPMDADS
HHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHHHHCCCCCCC
WATHGRIAGHYYCNTPLLSPHDEAHGDYSSCHAAGIAAQGLSGKEMSSRFHAKYSSDRDA
CCCCCCEEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
QCSFSVRDPNQFYAGILATVYNKVYFGWLDWNELILKPWKSEADVPEIEAFFYFKGDSGA
EEEEEECCCHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCCCCEEEEEEEECCCCH
KSLATSYVGKYKRLTGRDVPALAVDFPHDRIEFEK
HHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCC
>Mature Secondary Structure
MEFDPSSPGQTFIFHAADNPEGARAGSRAERVAARLQRRFDDTSPRCPDGEPAWLCSGLI
CCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
MRATANYPFTPNPNNPIASFSYLRKDAGTVNMFKHQGIILKPTPDLMERMACLYPMDADS
HHHCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHHHHCCCCCCC
WATHGRIAGHYYCNTPLLSPHDEAHGDYSSCHAAGIAAQGLSGKEMSSRFHAKYSSDRDA
CCCCCCEEEEEEECCCCCCCCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
QCSFSVRDPNQFYAGILATVYNKVYFGWLDWNELILKPWKSEADVPEIEAFFYFKGDSGA
EEEEEECCCHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCCCCCCCEEEEEEEECCCCH
KSLATSYVGKYKRLTGRDVPALAVDFPHDRIEFEK
HHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA