| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497330
Identifier: 34497330
GI number: 34497330
Start: 2035016
End: 2037151
Strand: Direct
Name: 34497330
Synonym: CV_1875
Alternate gene names: NA
Gene position: 2035016-2037151 (Clockwise)
Preceding gene: 34497329
Following gene: 34497331
Centisome position: 42.83
GC content: 63.2
Gene sequence:
>2136_bases ATGGCTATTACGCCCATTGCCGCCAAACAGACGGATTGGAAAGCGTCTTCCACCACGGCAGGCCTGGCCTCGCTCTATTT GATGCCGGACGGCTCGGTTTGGGCCGGCCGGGAAGGGCAAAAGCGCGGGCAACTGGGAGAGGCCTATCAAATCGAGGCCG GCGGGACGAAAAACACGGTCCTGCTCCCTTATCCGTCTTATATCGCCATGCCTGGCGATGACACGCCGGCACCGTCGGCG CGCGCCATACGCGCCGACGCCGACGGCAAGATATGGGTTGCCGAGAGCAGCTATGGCCTCCTGTACCGCATCGACCCCGG CAAGCTGTCCAGTGGCCGGGGGCAGGCGGAAATCGTTTACCAGAGCCCGGATGGCCGCAAGGGCGGCGGCGTGCCCTTCC AGTTCGGCGGCCTGGCATTCCAGCCCAAGTCTCCCGCCACCGGAAACAAGGACCTGGTCTGGGTTTGCGAGCAGAACCAC GGCATGCTGTACGCATTTGACGCGGCGGCGGCGCCTGGCTCGGCGCCGCTGGTGGAGCTGCAGCTCAAGCAGGACAAGGT GGTATGGCTGACCTCGCCGATATTGCAGCCCGGCGTCGAACCGGTGCTGTGGCTGCTGCTGGTCGATTATCAAACGACCG AGGCGATAGGCGCGGCCAGCCAGTTGGTCAGCGTGCCGGCGAAAGTCGGCGTGAAGGTGAGCGACTGCAAGTTCACCGCC GCGCCCCAGGCGATGTCCATGGCGCTGCGGGATCGCGCCTTATATGTCGGCGACAGCAAAGGCAGGGTACATCGGGTCGA TACCAGTGCTCTCGGACGCTCGTTGCAGATGCTTGCCACGCTGGAAGCGCCGGCGCTGTTGCTGCACATGGCGGTGGATG GCGGCGGCTACCTCTGGGTCGCGAATGCCGTGGCCAAAGGCATGCTGTACGTACTGTCGCCCAGCGGCGAGATGATGGCG GCGCTCAGCCTGAGCCGCGGCGCCACCGACGTGCTCCCCGGCGAGCTGGCCTGGAACGCCAAGGACGACACGGTTCTGGT TGCCGACGTCGGCGACAACGGGCGGGTGATGCAGGTTACGCTGGAAGGCGTGCCGATCGGGCCGGTTGGGCCGGACGGCA AGGCGCATTACACGATCTCGGCAAATCCGGACCATGGTACGACGAAGCCGGGCGCGGTGTTCGCCGCGCCTGATGGCATC AAGCTGGAAGCCCGTTCGACGCTTAATGACAAGCCGCCGATCGCGATTGCCGCGAGCCTGAGAGTGGACCCGGCGGAGGC CGGCGGCCATCTCGGGGCGGACGGCCTTCGTCGGAATGTGCTCATTCCAGCCGCCGGCTACGCGCTGAAGGACCTGACCG CCGGCGACAAGGGGAGCCAGATCAAGCTGATCGTCAGCGGACGCGGCTTGGAAGACAAGGTGGTGTTTGTCGGCGATATC CACGCCCCGACAACCAGCGTGTCATTCGATCCCAAAGGGCCGTTGCGCATCGTGCAAGGCCAGACTGTCCGTTCCTCGGA AAATGTCATCGTGACGACGAGTCCGAACGATGGCCGCTCTATCGAGGTGACCATCGGAGCCGGCGCGTATTTCGGCAATG AGGCGAATCCGGAGAGCAACAGAAAGGTGGCTAGCGGCATGCATCTGCCGGACATCACGGCGGGCAAGATCGCCGGCCCG GTTCTGGTCACGGCGAAAAGCGATGAGGCCTCCAGCCCGCTGGTGGTGGACGTGGTGCCGCTGCCGAAAACCATTTATTC CAATATTCAGGGCAATGTCCATATCACCCACTTTGCGCAGGCGATCGGGGCGATGGCTTTCATGGTGCAGGGATACAAGG AGCTCGACAATGCGGAGTCCGGCGAAGTGCCGGTTCCTTTCTGGCCGGTGCGAGTCGAGATCGCGAAAGAGTCTTACGAC TTGGGCATCCGTTTCAAGGATACCGGCAAACCAAACAGCACGCAGGTGCGTGAGTTCGTGACGAACGAGAAGGGCGTGGC TACCTTGCCTCCCGACAGCATGACAGTGCCCATGGTTTTTGGGCCCGTCACGCTGGAATATCAGGCGGCCGTCGATTTGC AAGGCAACTACATGGACAAGGTGAAGAAAACGGCGACGTTTTACATCATCGCCTAG
Upstream 100 bases:
>100_bases GCAGCTCACCGTGATCGCCTGATGACAGCGGTGCTTGTCGTCTGACATCGAAACGCCGCGTGCGCGCTGATTTTGAAAGA CTTTTCGTAAAGGAATCATC
Downstream 100 bases:
>100_bases CGGCTAGCCGATGCCGGCGGCGGTTGCCGCCGCCGGTCCTCCTGGCCGGAAAGGCAAGGCAGAATGGGAGCGATGTCATG AGATCGTTTGCAAAGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 711; Mature: 710
Protein sequence:
>711_residues MAITPIAAKQTDWKASSTTAGLASLYLMPDGSVWAGREGQKRGQLGEAYQIEAGGTKNTVLLPYPSYIAMPGDDTPAPSA RAIRADADGKIWVAESSYGLLYRIDPGKLSSGRGQAEIVYQSPDGRKGGGVPFQFGGLAFQPKSPATGNKDLVWVCEQNH GMLYAFDAAAAPGSAPLVELQLKQDKVVWLTSPILQPGVEPVLWLLLVDYQTTEAIGAASQLVSVPAKVGVKVSDCKFTA APQAMSMALRDRALYVGDSKGRVHRVDTSALGRSLQMLATLEAPALLLHMAVDGGGYLWVANAVAKGMLYVLSPSGEMMA ALSLSRGATDVLPGELAWNAKDDTVLVADVGDNGRVMQVTLEGVPIGPVGPDGKAHYTISANPDHGTTKPGAVFAAPDGI KLEARSTLNDKPPIAIAASLRVDPAEAGGHLGADGLRRNVLIPAAGYALKDLTAGDKGSQIKLIVSGRGLEDKVVFVGDI HAPTTSVSFDPKGPLRIVQGQTVRSSENVIVTTSPNDGRSIEVTIGAGAYFGNEANPESNRKVASGMHLPDITAGKIAGP VLVTAKSDEASSPLVVDVVPLPKTIYSNIQGNVHITHFAQAIGAMAFMVQGYKELDNAESGEVPVPFWPVRVEIAKESYD LGIRFKDTGKPNSTQVREFVTNEKGVATLPPDSMTVPMVFGPVTLEYQAAVDLQGNYMDKVKKTATFYIIA
Sequences:
>Translated_711_residues MAITPIAAKQTDWKASSTTAGLASLYLMPDGSVWAGREGQKRGQLGEAYQIEAGGTKNTVLLPYPSYIAMPGDDTPAPSA RAIRADADGKIWVAESSYGLLYRIDPGKLSSGRGQAEIVYQSPDGRKGGGVPFQFGGLAFQPKSPATGNKDLVWVCEQNH GMLYAFDAAAAPGSAPLVELQLKQDKVVWLTSPILQPGVEPVLWLLLVDYQTTEAIGAASQLVSVPAKVGVKVSDCKFTA APQAMSMALRDRALYVGDSKGRVHRVDTSALGRSLQMLATLEAPALLLHMAVDGGGYLWVANAVAKGMLYVLSPSGEMMA ALSLSRGATDVLPGELAWNAKDDTVLVADVGDNGRVMQVTLEGVPIGPVGPDGKAHYTISANPDHGTTKPGAVFAAPDGI KLEARSTLNDKPPIAIAASLRVDPAEAGGHLGADGLRRNVLIPAAGYALKDLTAGDKGSQIKLIVSGRGLEDKVVFVGDI HAPTTSVSFDPKGPLRIVQGQTVRSSENVIVTTSPNDGRSIEVTIGAGAYFGNEANPESNRKVASGMHLPDITAGKIAGP VLVTAKSDEASSPLVVDVVPLPKTIYSNIQGNVHITHFAQAIGAMAFMVQGYKELDNAESGEVPVPFWPVRVEIAKESYD LGIRFKDTGKPNSTQVREFVTNEKGVATLPPDSMTVPMVFGPVTLEYQAAVDLQGNYMDKVKKTATFYIIA >Mature_710_residues AITPIAAKQTDWKASSTTAGLASLYLMPDGSVWAGREGQKRGQLGEAYQIEAGGTKNTVLLPYPSYIAMPGDDTPAPSAR AIRADADGKIWVAESSYGLLYRIDPGKLSSGRGQAEIVYQSPDGRKGGGVPFQFGGLAFQPKSPATGNKDLVWVCEQNHG MLYAFDAAAAPGSAPLVELQLKQDKVVWLTSPILQPGVEPVLWLLLVDYQTTEAIGAASQLVSVPAKVGVKVSDCKFTAA PQAMSMALRDRALYVGDSKGRVHRVDTSALGRSLQMLATLEAPALLLHMAVDGGGYLWVANAVAKGMLYVLSPSGEMMAA LSLSRGATDVLPGELAWNAKDDTVLVADVGDNGRVMQVTLEGVPIGPVGPDGKAHYTISANPDHGTTKPGAVFAAPDGIK LEARSTLNDKPPIAIAASLRVDPAEAGGHLGADGLRRNVLIPAAGYALKDLTAGDKGSQIKLIVSGRGLEDKVVFVGDIH APTTSVSFDPKGPLRIVQGQTVRSSENVIVTTSPNDGRSIEVTIGAGAYFGNEANPESNRKVASGMHLPDITAGKIAGPV LVTAKSDEASSPLVVDVVPLPKTIYSNIQGNVHITHFAQAIGAMAFMVQGYKELDNAESGEVPVPFWPVRVEIAKESYDL GIRFKDTGKPNSTQVREFVTNEKGVATLPPDSMTVPMVFGPVTLEYQAAVDLQGNYMDKVKKTATFYIIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74860; Mature: 74729
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS01067 SECE_SEC61G
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITPIAAKQTDWKASSTTAGLASLYLMPDGSVWAGREGQKRGQLGEAYQIEAGGTKNTV CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCEEEEECCCCCCEE LLPYPSYIAMPGDDTPAPSARAIRADADGKIWVAESSYGLLYRIDPGKLSSGRGQAEIVY EEECCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEE QSPDGRKGGGVPFQFGGLAFQPKSPATGNKDLVWVCEQNHGMLYAFDAAAAPGSAPLVEL ECCCCCCCCCCCEEECCEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEE QLKQDKVVWLTSPILQPGVEPVLWLLLVDYQTTEAIGAASQLVSVPAKVGVKVSDCKFTA EECCCEEEEEECCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHCHHHHCEEEECCEEEC APQAMSMALRDRALYVGDSKGRVHRVDTSALGRSLQMLATLEAPALLLHMAVDGGGYLWV CCHHHHHHHHCCEEEEECCCCCEEEECHHHHCCCEEEEECCCCCEEEEEEEECCCCEEEE ANAVAKGMLYVLSPSGEMMAALSLSRGATDVLPGELAWNAKDDTVLVADVGDNGRVMQVT EEHHHCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEE LEGVPIGPVGPDGKAHYTISANPDHGTTKPGAVFAAPDGIKLEARSTLNDKPPIAIAASL ECCEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEE RVDPAEAGGHLGADGLRRNVLIPAAGYALKDLTAGDKGSQIKLIVSGRGLEDKVVFVGDI EECHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEC HAPTTSVSFDPKGPLRIVQGQTVRSSENVIVTTSPNDGRSIEVTIGAGAYFGNEANPESN CCCCCEEEECCCCCEEEEECCEEECCCCEEEEECCCCCCEEEEEEECCEECCCCCCCCCC RKVASGMHLPDITAGKIAGPVLVTAKSDEASSPLVVDVVPLPKTIYSNIQGNVHITHFAQ CHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCEEEHHHHH AIGAMAFMVQGYKELDNAESGEVPVPFWPVRVEIAKESYDLGIRFKDTGKPNSTQVREFV HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHH TNEKGVATLPPDSMTVPMVFGPVTLEYQAAVDLQGNYMDKVKKTATFYIIA CCCCCEEECCCCCEEEEEEECCEEEEEEEEEEECCCHHHHHCCEEEEEEEC >Mature Secondary Structure AITPIAAKQTDWKASSTTAGLASLYLMPDGSVWAGREGQKRGQLGEAYQIEAGGTKNTV CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCEEEEECCCCCCEE LLPYPSYIAMPGDDTPAPSARAIRADADGKIWVAESSYGLLYRIDPGKLSSGRGQAEIVY EEECCCEEEECCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEE QSPDGRKGGGVPFQFGGLAFQPKSPATGNKDLVWVCEQNHGMLYAFDAAAAPGSAPLVEL ECCCCCCCCCCCEEECCEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEE QLKQDKVVWLTSPILQPGVEPVLWLLLVDYQTTEAIGAASQLVSVPAKVGVKVSDCKFTA EECCCEEEEEECCCCCCCHHHEEEEEEECCCCHHHHHHHHHHHHCHHHHCEEEECCEEEC APQAMSMALRDRALYVGDSKGRVHRVDTSALGRSLQMLATLEAPALLLHMAVDGGGYLWV CCHHHHHHHHCCEEEEECCCCCEEEECHHHHCCCEEEEECCCCCEEEEEEEECCCCEEEE ANAVAKGMLYVLSPSGEMMAALSLSRGATDVLPGELAWNAKDDTVLVADVGDNGRVMQVT EEHHHCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEE LEGVPIGPVGPDGKAHYTISANPDHGTTKPGAVFAAPDGIKLEARSTLNDKPPIAIAASL ECCEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEEEE RVDPAEAGGHLGADGLRRNVLIPAAGYALKDLTAGDKGSQIKLIVSGRGLEDKVVFVGDI EECHHHCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEC HAPTTSVSFDPKGPLRIVQGQTVRSSENVIVTTSPNDGRSIEVTIGAGAYFGNEANPESN CCCCCEEEECCCCCEEEEECCEEECCCCEEEEECCCCCCEEEEEEECCEECCCCCCCCCC RKVASGMHLPDITAGKIAGPVLVTAKSDEASSPLVVDVVPLPKTIYSNIQGNVHITHFAQ CHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCHHHHHCCCCCEEEHHHHH AIGAMAFMVQGYKELDNAESGEVPVPFWPVRVEIAKESYDLGIRFKDTGKPNSTQVREFV HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHH TNEKGVATLPPDSMTVPMVFGPVTLEYQAAVDLQGNYMDKVKKTATFYIIA CCCCCEEECCCCCEEEEEEECCEEEEEEEEEEECCCHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA