| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34497328
Identifier: 34497328
GI number: 34497328
Start: 2031887
End: 2033914
Strand: Direct
Name: 34497328
Synonym: CV_1873
Alternate gene names: NA
Gene position: 2031887-2033914 (Clockwise)
Preceding gene: 34497327
Following gene: 34497329
Centisome position: 42.77
GC content: 59.96
Gene sequence:
>2028_bases ATGCCCAATCAATTGTCGGCTACTGATATTCAATTGGCGAGTCAGCCGTTACAGCTTGCTTATGATGTCTCGACAAATCT TGCGAAGTCCTCTTCCGTATGGATATTCCGAGTCTTGAACAGCAGAGGTGAATCTCTGGATGGCCAGCCCGCCTTTTTTC ATCTGATCGGAGAGGATGTCCATTTTTCAGGGATTGGCGCGGGTGAGCCATGGAAGGCGACCATTCATGGGGACCTGGTC GAGTTGCCTCAGGGTGTGGTGTTGCTGCGAGGCAAGACGGGCGAGCATTCTCTTCTGGTCAAAGTAGGCGATTTTTCTAA ACCATTTCCGATCACGATCGTGGGAGATGACCAACATTCCGATTGGCAGCTGAAATTGGAGGAGGGGAAACCTAGTACGA ATTTAAGCGTGGGTGGATCATTCCTTTTTGTTTTTTCCCTTAAATATAGGGGCGAAGCGCAAAAAGAGAAAACGTTGGAG GTAGCGGCGGCCAACGCGGACCGCCTCGAACCGCTGCCGTCGAAACTGGTCACGCTGGAAAACGGGCAGGCATCTTTGCC GGTAGTCGCAACGAAGCCGGGTAAGGCGGAAATTACCATCACCCATGCGGCTTCCGGCTCGTCCATCAAGTTGACATTCG AGATTTCGGAGGCGGTGGCCCGGCAATATCTGCTGGAGCTGCTCAAGCCCGCCAACAGGAAGCTGGCGGTCAGCCGGCAG GACGCGGTTCAGATCCAGGTGTCGGATGCGAAAAGCAAAACGCCGGCCAGCGGAGCCATCAAGGTCGTTGTCGTTCCGGA TGCCGCCCATGACCTCGCTGGGATCGAGTGGATGGCGAAGACGGTTGCGACCCGGAACGGCATTGCCGAGTTTCTGGCGA CGCCGAAGGCCGTCGGCACCAGCCATGTGGTGTTTCAGATCGATCCTGCGGGGCTCGCCGCTCCGCTGCCGGTCGCGCTG ACCGCGCAGACAAACGCAGGAGAGACGCAGCTGACGATTTCACCGGAAACGGTGGATTTGCTCCCCAACAGCGTGGATGA CAAACATCCGATCCACGTGTTCTTCGATCCGCCGTTGGCGGAACCCCCCGCAACCATCGGCTTCAAGGTATTGGAAAGCG GCAGTTCGCTGCGGGTGAGGCAGGGCACTCTGCAATGGCTGGCCGGCGAGCTGAAGGTCGGCAGTGGCGGCGAGGCGATT CTCCAGTCCTTGCAGGTGGGGGCGGAGGCGCCGGGAACGACGCTGCATATCCAGTTCAGCGTCCCAGGCTCAGACGCGCA GCCCTGCGTTTTGAACGTGACGATCGCGGCGCAGGCGCAGGCGGCGAAACTGATGCCGCCCGGCATCGCCACCGAGGCGC TGCCCTTGATCGCCGACTGGCGCTCACTGATCAGCCTGAGCGGATGCTATGTGCTGGTGGATGGGCAGCAGGCAGGCGTT TCGGTGGAGTTCCACCTGGTGACGGAAGTGGAAAAGCTCGTCGAATTCGCCGCGCCGGAGACGCTGGCGGACAGGCTCAT CCGCACGGTCAAGACCAAGGCCGGCGGTCGCGCCGCGTTGCCGGACATTGTGTCCGGCGATGGTGTCGGCAAGTTTCACG TCGATGTCTACCTGGTCGGCAATCATCATCGTCTGGGCAGTTTCCATTTCAGCGTGGAGCAGCCGCGCCCCGCCCAGGCG GTGGTGTTCAGCGACGATCCATACGCCCACCTGCTGCCTGGCCGCACCTTCAACTCGGATTATGTGACGGTCTATTCGGA CCTGAACCAGCGCACGCCGTTGCACGGCGGCACCGTTCAATTCGATCTCGACGATTCGAAGTCCCGCACCGGCAGTCGAT TCGCTCTGGCCAATGGAGAGTTTTCGCTGCATGCCGTCGCGCCGATCAATCTGCATGGCCGGGCGGTGATGCCGGATATC CGGGTGGGAGAGGAGGCTGGCAGTTTCGACGTCAGGGCGTCGGTGTCCACCGCAGAGGGCTCTCCGCTGGTCACCAAGAC CAAGACCTACACCATCGCAACCTTCTGA
Upstream 100 bases:
>100_bases CGTGCCTAAATCCACGGTTCGATATTGTGTGACATTCAGAGGGAAGTCACCCAACATCAACATCAAACGTGGGGCGATTA TATCGAATGTTCGATTTTTT
Downstream 100 bases:
>100_bases CGACAGGGAAAGGAGTCTGGCATGGCCAACAGTCTTTCCGTCGTGGGCGGCAAGGAGATCTATGACTTCGACGCGGGTTC GCTTGCCCAATTGCAGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MPNQLSATDIQLASQPLQLAYDVSTNLAKSSSVWIFRVLNSRGESLDGQPAFFHLIGEDVHFSGIGAGEPWKATIHGDLV ELPQGVVLLRGKTGEHSLLVKVGDFSKPFPITIVGDDQHSDWQLKLEEGKPSTNLSVGGSFLFVFSLKYRGEAQKEKTLE VAAANADRLEPLPSKLVTLENGQASLPVVATKPGKAEITITHAASGSSIKLTFEISEAVARQYLLELLKPANRKLAVSRQ DAVQIQVSDAKSKTPASGAIKVVVVPDAAHDLAGIEWMAKTVATRNGIAEFLATPKAVGTSHVVFQIDPAGLAAPLPVAL TAQTNAGETQLTISPETVDLLPNSVDDKHPIHVFFDPPLAEPPATIGFKVLESGSSLRVRQGTLQWLAGELKVGSGGEAI LQSLQVGAEAPGTTLHIQFSVPGSDAQPCVLNVTIAAQAQAAKLMPPGIATEALPLIADWRSLISLSGCYVLVDGQQAGV SVEFHLVTEVEKLVEFAAPETLADRLIRTVKTKAGGRAALPDIVSGDGVGKFHVDVYLVGNHHRLGSFHFSVEQPRPAQA VVFSDDPYAHLLPGRTFNSDYVTVYSDLNQRTPLHGGTVQFDLDDSKSRTGSRFALANGEFSLHAVAPINLHGRAVMPDI RVGEEAGSFDVRASVSTAEGSPLVTKTKTYTIATF
Sequences:
>Translated_675_residues MPNQLSATDIQLASQPLQLAYDVSTNLAKSSSVWIFRVLNSRGESLDGQPAFFHLIGEDVHFSGIGAGEPWKATIHGDLV ELPQGVVLLRGKTGEHSLLVKVGDFSKPFPITIVGDDQHSDWQLKLEEGKPSTNLSVGGSFLFVFSLKYRGEAQKEKTLE VAAANADRLEPLPSKLVTLENGQASLPVVATKPGKAEITITHAASGSSIKLTFEISEAVARQYLLELLKPANRKLAVSRQ DAVQIQVSDAKSKTPASGAIKVVVVPDAAHDLAGIEWMAKTVATRNGIAEFLATPKAVGTSHVVFQIDPAGLAAPLPVAL TAQTNAGETQLTISPETVDLLPNSVDDKHPIHVFFDPPLAEPPATIGFKVLESGSSLRVRQGTLQWLAGELKVGSGGEAI LQSLQVGAEAPGTTLHIQFSVPGSDAQPCVLNVTIAAQAQAAKLMPPGIATEALPLIADWRSLISLSGCYVLVDGQQAGV SVEFHLVTEVEKLVEFAAPETLADRLIRTVKTKAGGRAALPDIVSGDGVGKFHVDVYLVGNHHRLGSFHFSVEQPRPAQA VVFSDDPYAHLLPGRTFNSDYVTVYSDLNQRTPLHGGTVQFDLDDSKSRTGSRFALANGEFSLHAVAPINLHGRAVMPDI RVGEEAGSFDVRASVSTAEGSPLVTKTKTYTIATF >Mature_674_residues PNQLSATDIQLASQPLQLAYDVSTNLAKSSSVWIFRVLNSRGESLDGQPAFFHLIGEDVHFSGIGAGEPWKATIHGDLVE LPQGVVLLRGKTGEHSLLVKVGDFSKPFPITIVGDDQHSDWQLKLEEGKPSTNLSVGGSFLFVFSLKYRGEAQKEKTLEV AAANADRLEPLPSKLVTLENGQASLPVVATKPGKAEITITHAASGSSIKLTFEISEAVARQYLLELLKPANRKLAVSRQD AVQIQVSDAKSKTPASGAIKVVVVPDAAHDLAGIEWMAKTVATRNGIAEFLATPKAVGTSHVVFQIDPAGLAAPLPVALT AQTNAGETQLTISPETVDLLPNSVDDKHPIHVFFDPPLAEPPATIGFKVLESGSSLRVRQGTLQWLAGELKVGSGGEAIL QSLQVGAEAPGTTLHIQFSVPGSDAQPCVLNVTIAAQAQAAKLMPPGIATEALPLIADWRSLISLSGCYVLVDGQQAGVS VEFHLVTEVEKLVEFAAPETLADRLIRTVKTKAGGRAALPDIVSGDGVGKFHVDVYLVGNHHRLGSFHFSVEQPRPAQAV VFSDDPYAHLLPGRTFNSDYVTVYSDLNQRTPLHGGTVQFDLDDSKSRTGSRFALANGEFSLHAVAPINLHGRAVMPDIR VGEEAGSFDVRASVSTAEGSPLVTKTKTYTIATF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71752; Mature: 71621
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNQLSATDIQLASQPLQLAYDVSTNLAKSSSVWIFRVLNSRGESLDGQPAFFHLIGEDV CCCCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCE HFSGIGAGEPWKATIHGDLVELPQGVVLLRGKTGEHSLLVKVGDFSKPFPITIVGDDQHS EEEECCCCCCEEEEECCCHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCC DWQLKLEEGKPSTNLSVGGSFLFVFSLKYRGEAQKEKTLEVAAANADRLEPLPSKLVTLE CEEEEEECCCCCCCEEECCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEE NGQASLPVVATKPGKAEITITHAASGSSIKLTFEISEAVARQYLLELLKPANRKLAVSRQ CCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECC DAVQIQVSDAKSKTPASGAIKVVVVPDAAHDLAGIEWMAKTVATRNGIAEFLATPKAVGT CEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC SHVVFQIDPAGLAAPLPVALTAQTNAGETQLTISPETVDLLPNSVDDKHPIHVFFDPPLA EEEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCEEEEECCCCC EPPATIGFKVLESGSSLRVRQGTLQWLAGELKVGSGGEAILQSLQVGAEAPGTTLHIQFS CCCCCCCEEEECCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEE VPGSDAQPCVLNVTIAAQAQAAKLMPPGIATEALPLIADWRSLISLSGCYVLVDGQQAGV CCCCCCCCEEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCE SVEFHLVTEVEKLVEFAAPETLADRLIRTVKTKAGGRAALPDIVSGDGVGKFHVDVYLVG EEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEE NHHRLGSFHFSVEQPRPAQAVVFSDDPYAHLLPGRTFNSDYVTVYSDLNQRTPLHGGTVQ CCEEECEEEEEECCCCCCEEEEECCCCCEEECCCCEECCCEEEEEECCCCCCCCCCCEEE FDLDDSKSRTGSRFALANGEFSLHAVAPINLHGRAVMPDIRVGEEAGSFDVRASVSTAEG EEECCCCCCCCCEEEEECCCEEEEEEEEEEECCCEECCCCEECCCCCCEEEEEEEECCCC SPLVTKTKTYTIATF CCEEEEEEEEEEEEC >Mature Secondary Structure PNQLSATDIQLASQPLQLAYDVSTNLAKSSSVWIFRVLNSRGESLDGQPAFFHLIGEDV CCCCCCCEEEECCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCE HFSGIGAGEPWKATIHGDLVELPQGVVLLRGKTGEHSLLVKVGDFSKPFPITIVGDDQHS EEEECCCCCCEEEEECCCHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCC DWQLKLEEGKPSTNLSVGGSFLFVFSLKYRGEAQKEKTLEVAAANADRLEPLPSKLVTLE CEEEEEECCCCCCCEEECCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCEEEEE NGQASLPVVATKPGKAEITITHAASGSSIKLTFEISEAVARQYLLELLKPANRKLAVSRQ CCCCCCCEEEECCCCEEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECC DAVQIQVSDAKSKTPASGAIKVVVVPDAAHDLAGIEWMAKTVATRNGIAEFLATPKAVGT CEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC SHVVFQIDPAGLAAPLPVALTAQTNAGETQLTISPETVDLLPNSVDDKHPIHVFFDPPLA EEEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCEEEEECCCCC EPPATIGFKVLESGSSLRVRQGTLQWLAGELKVGSGGEAILQSLQVGAEAPGTTLHIQFS CCCCCCCEEEECCCCCEEEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCEEEEEEE VPGSDAQPCVLNVTIAAQAQAAKLMPPGIATEALPLIADWRSLISLSGCYVLVDGQQAGV CCCCCCCCEEEEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCE SVEFHLVTEVEKLVEFAAPETLADRLIRTVKTKAGGRAALPDIVSGDGVGKFHVDVYLVG EEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEE NHHRLGSFHFSVEQPRPAQAVVFSDDPYAHLLPGRTFNSDYVTVYSDLNQRTPLHGGTVQ CCEEECEEEEEECCCCCCEEEEECCCCCEEECCCCEECCCEEEEEECCCCCCCCCCCEEE FDLDDSKSRTGSRFALANGEFSLHAVAPINLHGRAVMPDIRVGEEAGSFDVRASVSTAEG EEECCCCCCCCCEEEEECCCEEEEEEEEEEECCCEECCCCEECCCCCCEEEEEEEECCCC SPLVTKTKTYTIATF CCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA