| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497327
Identifier: 34497327
GI number: 34497327
Start: 2031339
End: 2031818
Strand: Direct
Name: 34497327
Synonym: CV_1872
Alternate gene names: NA
Gene position: 2031339-2031818 (Clockwise)
Preceding gene: 34497326
Following gene: 34497328
Centisome position: 42.76
GC content: 46.25
Gene sequence:
>480_bases ATGGATAAAAGGAATTTGTTGGAGAATGCCAGTCTCAATGGCTTTCATGACCGTGTTTTTTCATTTGTCGAGGGTAATGG ATATCAGGTCCAACTCCATCGAGGTGAGAAGGTGGACGGTTGGGTAGTGGGCCAAGATGGAAATGGCGTGTATGCCTGCA ATTACCAGAATTCTGGATTCCCAGAAGGAAGTGGAGACCAGGTGCGGGGAGGCATACGATTGTGTGTGGATGGCGTCCCT GGTTCTATTTTCTATGATTTGGGCGTGTTGATCTCTGGGCAGTCATATGAAGTTAAATGGCTCGACACTCTGGATCACCA TCATGGAAACAGGGAGTTTGATGGATACACAGTCCGTATCGATACGCATAACGATGGCAAGACTTCCCCATTCGGTTGGA GGATAATTACGAAGCACGAAATAACTGGATGGAGAATTCATTTTTGTTCGTGCCTAAATCCACGGTTCGATATTGTGTGA
Upstream 100 bases:
>100_bases TATTTCTATTTTCTACACTTGTGTGTGCCGAATCGCTGCTGTAGATGGTGGTGCAATGATGTCGTGGTTTTCTAATGTAT TGTGAGGATGGAGGAAACTA
Downstream 100 bases:
>100_bases CATTCAGAGGGAAGTCACCCAACATCAACATCAAACGTGGGGCGATTATATCGAATGTTCGATTTTTTATGCCCAATCAA TTGTCGGCTACTGATATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MDKRNLLENASLNGFHDRVFSFVEGNGYQVQLHRGEKVDGWVVGQDGNGVYACNYQNSGFPEGSGDQVRGGIRLCVDGVP GSIFYDLGVLISGQSYEVKWLDTLDHHHGNREFDGYTVRIDTHNDGKTSPFGWRIITKHEITGWRIHFCSCLNPRFDIV
Sequences:
>Translated_159_residues MDKRNLLENASLNGFHDRVFSFVEGNGYQVQLHRGEKVDGWVVGQDGNGVYACNYQNSGFPEGSGDQVRGGIRLCVDGVP GSIFYDLGVLISGQSYEVKWLDTLDHHHGNREFDGYTVRIDTHNDGKTSPFGWRIITKHEITGWRIHFCSCLNPRFDIV >Mature_159_residues MDKRNLLENASLNGFHDRVFSFVEGNGYQVQLHRGEKVDGWVVGQDGNGVYACNYQNSGFPEGSGDQVRGGIRLCVDGVP GSIFYDLGVLISGQSYEVKWLDTLDHHHGNREFDGYTVRIDTHNDGKTSPFGWRIITKHEITGWRIHFCSCLNPRFDIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17934; Mature: 17934
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRNLLENASLNGFHDRVFSFVEGNGYQVQLHRGEKVDGWVVGQDGNGVYACNYQNSGF CCCHHCCCCCCCCCHHHHHHEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCC PEGSGDQVRGGIRLCVDGVPGSIFYDLGVLISGQSYEVKWLDTLDHHHGNREFDGYTVRI CCCCCCEECCCEEEEEECCCCEEEEEEEEEEECCCEEEEEEECHHCCCCCCCCCCEEEEE DTHNDGKTSPFGWRIITKHEITGWRIHFCSCLNPRFDIV ECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCC >Mature Secondary Structure MDKRNLLENASLNGFHDRVFSFVEGNGYQVQLHRGEKVDGWVVGQDGNGVYACNYQNSGF CCCHHCCCCCCCCCHHHHHHEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCCCC PEGSGDQVRGGIRLCVDGVPGSIFYDLGVLISGQSYEVKWLDTLDHHHGNREFDGYTVRI CCCCCCEECCCEEEEEECCCCEEEEEEEEEEECCCEEEEEEECHHCCCCCCCCCCEEEEE DTHNDGKTSPFGWRIITKHEITGWRIHFCSCLNPRFDIV ECCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA