| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497308
Identifier: 34497308
GI number: 34497308
Start: 2008431
End: 2009885
Strand: Direct
Name: 34497308
Synonym: CV_1853
Alternate gene names: NA
Gene position: 2008431-2009885 (Clockwise)
Preceding gene: 34497304
Following gene: 34497310
Centisome position: 42.27
GC content: 68.25
Gene sequence:
>1455_bases CTGCTGCAGCTGGCCGAGCTGGCCGGCGTCGCCGTCGCCCAGCACGATGGACATCAGCGCGTCCTGCTCGCCGGGCGCGA TCAGGTCCAGCACCGACTGGCCGGGCAGCATGCAGGGCGGGAAGCCGAAAATGCGTTCGGCGACGGCGTTGGCGGTCACG ATGAAGCCAGTGCGGTCCAGCGTCACGATGCCGTCTATCGAGGTGTCGATCACCGCGGCCAGTTGCGCCTGCTGTTGGGC CAGCTGGCGGTCGGCGCGCTGCAGCGCCTGCTGATCCTGGTTGGCGAGGATCAGCTGGCTCAGCGTGTTCATCAGCACCG GCGGGATGGCGTCGGCCGGCGTCGGCCGCGCCACCGGCGACAGGAACAGCGTGAACGAGCCGATCACCCGGCTGGCGTGC AGAATGGGCAGCGTGAGGAAGTCGCAGTCGTCGCGGAAGGGGCCGCGCGCGCCCTGCTGCAGATGCAGCAGCCGCTCCTG GGTCTCGGTCACGGCGATGCGCAGGATATCGTCGCGCGGCAACTCCACCGGCGGGCATTGCGGGGGCGTCAGCGGCAGCA GCAAGGGTTCGCCGTCGCGTTCGCGCAGCTCGCACAGGAAACCGTGCTCGGCTTCGAAATGCAGCAGCAGGATGTCGCGC GCGTAGCAGAACAGCGTGCCGGCGGGCAGCTTGCTGATGAACAGGCTTTGCAGATAGTTGATGGCGTCCAGCAGCTTCTC GTTGCGGCGCAGCCGGACGCCGGCGGCGGCCGAGTCGGCCAGCGCCTCCTGCATGCGTTCGTAGTTGCCGGCCAACTGCG TCGACATGCTGTTGAACATGCGCGCGGTGCGGGCGAGCTCGTCGTTGCCCAGCAGCGGTATCTGGTAGCCGATGTCGCCA TCGGCCATGCGCTTGGCCGCTTGCTGCAGCGCGTTCAGCTGACGGGTCAGGTAAATGCCCAGCGCGATGGAGAACAGCGC GGAAAGCAGCAGTTCGGCTACCGCCAGCAGCAGGCCGTCCTGGCGCGCCTGCGCCATCAACTGCCGGTGGGCGGCAGCGG AGTCGCCGAGCTCGACCTGGCCGTAACGGATGCCGCCGACGGTGATGTCGTGGGTGACGGCGAACAGCTGGCCGTTTTCC AGCTGTTCCGGCGTGGGGCTCGGCGGCCGCAAGGCCGCCAGCGCGGCGGGATCGCCGGCCTCGGCCAGCACCCGGTCCCG ATTGTCCCGAACCCTGGCGTAGACCACGCTGTTGGAGGCCACCATCTGCTGGACGGCGCTGCGCAGGGTGGCCAGGTCGG TGCTGAGCACGGCGTTCTGGTTGGCCTGGGCGAACAGCTCGGCGATGATCTGGCTGCGCTTGAGCAGTTCCCGGGCGCTG GTGTCGTGCAGCAGCGCCAGGCCGAAATGCAGCAGCAGACCGAGCATGATCATCTCGATCAGCGCGATCCCCAATATGGT TTTCAGCCGGAATGA
Upstream 100 bases:
>100_bases CGCGCAGCGTCATGTTGAAGCCGATGCCATCCAGCTCAGGCATGCGGGTGATGGCCATCTCCAGCGGGAACAGGCTGCCG TCGGCGCGCGCGGCGGTCAG
Downstream 100 bases:
>100_bases CATTGTTCAGCGCTCCACCGGCGGCTGGTAGCGCAGCTTGAGGCGGCGGATGTCGTTCCAGTCGCTATCCTGCGCCTCGG TCAGCGGCGTCAGCTGTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQRHDAVYRGVDHRGQLRLLLG QLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRRQEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLL GLGHGDAQDIVARQLHRRALRGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGRLLQRVQLTGQVNAQRDGEQR GKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAADGDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVP IVPNPGVDHAVGGHHLLDGAAQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG FQPE
Sequences:
>Translated_484_residues MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQRHDAVYRGVDHRGQLRLLLG QLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRRQEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLL GLGHGDAQDIVARQLHRRALRGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGRLLQRVQLTGQVNAQRDGEQR GKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAADGDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVP IVPNPGVDHAVGGHHLLDGAAQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG FQPE >Mature_484_residues MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQRHDAVYRGVDHRGQLRLLLG QLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRRQEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLL GLGHGDAQDIVARQLHRRALRGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGRLLQRVQLTGQVNAQRDGEQR GKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAADGDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVP IVPNPGVDHAVGGHHLLDGAAQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG FQPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52269; Mature: 52269
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQ CCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHH RHDAVYRGVDHRGQLRLLLGQLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH QEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLLGLGHGDAQDIVARQLHRRAL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH LLQRVQLTGQVNAQRDGEQRGKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAAD HHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC GDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVPIVPNPGVDHAVGGHHLLDGA CCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC AQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG CCCCCCCCCCCEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC FQPE CCCC >Mature Secondary Structure MLQLAELAGVAVAQHDGHQRVLLAGRDQVQHRLAGQHAGREAENAFGDGVGGHDEASAVQ CCCHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHH RHDAVYRGVDHRGQLRLLLGQLAVGALQRLLILVGEDQLAQRVHQHRRDGVGRRRPRHRR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHH QEQRERADHPAGVQNGQREEVAVVAEGAARALLQMQQPLLGLGHGDAQDIVARQLHRRAL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RGRQRQQQGFAVAFAQLAQETVLGFEMQQQDVARVAEQRAGGQLADEQALQIVDGVQQLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VAAQPDAGGGRVGQRLLHAFVVAGQLRRHAVEHARGAGELVVAQQRYLVADVAIGHALGR HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH LLQRVQLTGQVNAQRDGEQRGKQQFGYRQQQAVLARLRHQLPVGGSGVAELDLAVTDAAD HHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC GDVVGDGEQLAVFQLFRRGARRPQGRQRGGIAGLGQHPVPIVPNPGVDHAVGGHHLLDGA CCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC AQGGQVGAEHGVLVGLGEQLGDDLAALEQFPGAGVVQQRQAEMQQQTEHDHLDQRDPQYG CCCCCCCCCCCEEEECCHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC FQPE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA