Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

Click here to switch to the map view.

The map label for this gene is 34497288

Identifier: 34497288

GI number: 34497288

Start: 1991198

End: 1992073

Strand: Direct

Name: 34497288

Synonym: CV_1833

Alternate gene names: NA

Gene position: 1991198-1992073 (Clockwise)

Preceding gene: 34497286

Following gene: 34497289

Centisome position: 41.91

GC content: 66.32

Gene sequence:

>876_bases
ATGAAACGATTCAAGCCCGCCAAAACCCTGCCGGCCGGCTTCACGCCCGCGATGCTGGCCGCCTGTCAGCAGTTGCTGCA
GCAGGAAGGCGTGCAGGTGAAGCTGCAGTGGAACGAACAGGAAATCTTCGCCAGCTTCGACGGCTGGTGGCTGTGCAGCA
GCTTCATTCCGCAGGCTCGTGTGCGAGACGGCCGCTGCCAGTTGCTGCAATACGCGGCGCGGCTGCGCATCTTCGGCCAG
TTCGGCCAGGCGCTGCCGGCCAATTGGCTGTTCGCGATGAATTACGGCGAAACCAAGGCGGTGGCGCTGCTCAAGCTGAT
CCGCGTGCTGCACGTGCTCAACCACCTGGGGCGCAATGGCCGCCACCTGCCGCTGCGGATAGACGTCGACCCGCGCATCT
GCCACGCCTACAGCGACCGCATCGTCGATTTCACCGCCCGCCTGCTGGAAACGCTGGAGTTTCCGGCCAACCAGGCGCAG
ATGCTGCTGTTCCTGGACGAGCGCACCAGCGATCTGGGCTTGTCGTTGCTGCGGCGCTACCGCCAGCACGGCCATCGGCT
GGGGTTGGGCGATTTCGGCGCCGGAGGGCAGGACTTGCTGAGGCTATGGCGGCTGGAGCCGGACGGCCTGGCGCTGGCGC
CGCGCTTCATGAGCCGCGCGGTGATGTATCCCCGCGTGCGCGACCAGTTGCTGTTGCTGGCGCCGCAGCTGGTGGAGCAG
GGCTTCGCGCTGGCGGTGGAGGACATCGTCTGCCAGAACATGCTGGGCCTGGCGCAGCGGATGGGCGCGGAGCACTGTTC
GGGGCCGCTGCTGTCGGAACGGTTGAAGCGGCAGCGAGCGGCGCGGGAAGTGGATTTGTCCAATATCGCCTGTTAG

Upstream 100 bases:

>100_bases
CGGCATTCCGGAAAAACAGATAGGCTTATCGGCAAATCGTATATGACCTTGTCACGGCCGGGACTATAGTTGCGCCAATT
CCACTACCCGGGGTCCGGTC

Downstream 100 bases:

>100_bases
GATATTGGCATTTTCGATCGTTCGGTCGAGTGCGTATCCAAAAGGGTGAACAATGAAACAACTGGCATTGGCGACGATGT
GCGCATTGGGTTTGTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKRFKPAKTLPAGFTPAMLAACQQLLQQEGVQVKLQWNEQEIFASFDGWWLCSSFIPQARVRDGRCQLLQYAARLRIFGQ
FGQALPANWLFAMNYGETKAVALLKLIRVLHVLNHLGRNGRHLPLRIDVDPRICHAYSDRIVDFTARLLETLEFPANQAQ
MLLFLDERTSDLGLSLLRRYRQHGHRLGLGDFGAGGQDLLRLWRLEPDGLALAPRFMSRAVMYPRVRDQLLLLAPQLVEQ
GFALAVEDIVCQNMLGLAQRMGAEHCSGPLLSERLKRQRAAREVDLSNIAC

Sequences:

>Translated_291_residues
MKRFKPAKTLPAGFTPAMLAACQQLLQQEGVQVKLQWNEQEIFASFDGWWLCSSFIPQARVRDGRCQLLQYAARLRIFGQ
FGQALPANWLFAMNYGETKAVALLKLIRVLHVLNHLGRNGRHLPLRIDVDPRICHAYSDRIVDFTARLLETLEFPANQAQ
MLLFLDERTSDLGLSLLRRYRQHGHRLGLGDFGAGGQDLLRLWRLEPDGLALAPRFMSRAVMYPRVRDQLLLLAPQLVEQ
GFALAVEDIVCQNMLGLAQRMGAEHCSGPLLSERLKRQRAAREVDLSNIAC
>Mature_291_residues
MKRFKPAKTLPAGFTPAMLAACQQLLQQEGVQVKLQWNEQEIFASFDGWWLCSSFIPQARVRDGRCQLLQYAARLRIFGQ
FGQALPANWLFAMNYGETKAVALLKLIRVLHVLNHLGRNGRHLPLRIDVDPRICHAYSDRIVDFTARLLETLEFPANQAQ
MLLFLDERTSDLGLSLLRRYRQHGHRLGLGDFGAGGQDLLRLWRLEPDGLALAPRFMSRAVMYPRVRDQLLLLAPQLVEQ
GFALAVEDIVCQNMLGLAQRMGAEHCSGPLLSERLKRQRAAREVDLSNIAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33027; Mature: 33027

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFKPAKTLPAGFTPAMLAACQQLLQQEGVQVKLQWNEQEIFASFDGWWLCSSFIPQAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCHHHHHHHHCCHHH
VRDGRCQLLQYAARLRIFGQFGQALPANWLFAMNYGETKAVALLKLIRVLHVLNHLGRNG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
RHLPLRIDVDPRICHAYSDRIVDFTARLLETLEFPANQAQMLLFLDERTSDLGLSLLRRY
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH
RQHGHRLGLGDFGAGGQDLLRLWRLEPDGLALAPRFMSRAVMYPRVRDQLLLLAPQLVEQ
HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECHHHHHHHHHCHHHHHHHHHHHHHHHHC
GFALAVEDIVCQNMLGLAQRMGAEHCSGPLLSERLKRQRAAREVDLSNIAC
CHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure
MKRFKPAKTLPAGFTPAMLAACQQLLQQEGVQVKLQWNEQEIFASFDGWWLCSSFIPQAR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCHHHHHHHHCCHHH
VRDGRCQLLQYAARLRIFGQFGQALPANWLFAMNYGETKAVALLKLIRVLHVLNHLGRNG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
RHLPLRIDVDPRICHAYSDRIVDFTARLLETLEFPANQAQMLLFLDERTSDLGLSLLRRY
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHH
RQHGHRLGLGDFGAGGQDLLRLWRLEPDGLALAPRFMSRAVMYPRVRDQLLLLAPQLVEQ
HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECHHHHHHHHHCHHHHHHHHHHHHHHHHC
GFALAVEDIVCQNMLGLAQRMGAEHCSGPLLSERLKRQRAAREVDLSNIAC
CHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA