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The map label for this gene is pecM [H]

Identifier: 34497232

GI number: 34497232

Start: 1932863

End: 1933741

Strand: Direct

Name: pecM [H]

Synonym: CV_1777

Alternate gene names: 34497232

Gene position: 1932863-1933741 (Clockwise)

Preceding gene: 34497228

Following gene: 34497235

Centisome position: 40.68

GC content: 69.85

Gene sequence:

>879_bases
ATGTCTGCGAAAACCGAAGCCGGACACTGGCGGGATGTGCTGCTCACCGCGCTCACCCCGGTGATCTGGGGCTCCACCTA
TATCGTCACCACCCAATTGCTGCCGCCGGACCGTCCGTTCACCGCTGCCTTGCTGCGGGTGCTGCCGGCGGGCCTGCTGC
TGGTGTGGATGGGCGGGTGGCGGCCGCGCGCATCGGAATGGGGCAGGCTGTTGATCCTGTCAGCGCTCAACATCGGCGCG
TTCCAGGCCTTGCTGTTCGTCGCCGCCTACCGTTTGCCGGGCGGCCTGGCCGCCGTGGTGGGGGCCTGTCAGCCCTTGCT
GGTGATGGCGCTGGCCTGGCGGCTGGACAGCAGGCGTCCGGCGGCGATGGCCTTGTGGGCCAGCCTGTCCGGCGTGGCCG
GTATGGCGGCGCTGCTGCTGTCGCCGGGTTCGAGCTGGGACGGCCTGGGCATGCTGGCGGCTTTCGGCGGCGCGGTATCG
ATGGCTTGCGGCACTTATCTGACGCGGCGCTGGCGATTGTCGGCGCCGGTGACCGCGTTGACTGGCTGGCAACTGGCGCT
GGGCGGCCTGATGCTGCTGCCGCTGGCGATGGCCATCGATCCGCCGCTGCCCAGCCTGGGCTGGACGCAGGTGGCAGGCT
ATGCCTACCTGGCGCTGTTCGGCGCGCTGCTGGCCTACCTGTTGTGGTTCCGCGGCATCGCGCGGCTGTCGCCGGTGGCG
GTGTCGTCGCTGGGCCTGCTCAGCCCGCTGACCGCGGTGATCCTGGGTTGGGCGTTGCTGGGGCAGGCGTTGTCCGCGCA
ATCGCTGCTGGGCATGGCGGTGGTGTTGGCCAGCGTGCTGGCGGTGCAGTGGGGCATGATGAATGCCGCGCCAAAGTAA

Upstream 100 bases:

>100_bases
CTTGAATTCAAGATTTATTTGCCTTGAATTCGAGATAAATGTTATCTTGAATTCAAGTTAACTGTGATCGGGATTATAAA
CCCCGAAGAGAGGATTGCCC

Downstream 100 bases:

>100_bases
GGGAGTTTGCGCTTAGCGTGGCTCATGCGGGCTTAGCCGCGCCATCATCAAGACATCTATGCGGCGGCCATCGATGCAGA
CGGCTTCCCGCTTGCGGCCC

Product: regulator protein pecM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSAKTEAGHWRDVLLTALTPVIWGSTYIVTTQLLPPDRPFTAALLRVLPAGLLLVWMGGWRPRASEWGRLLILSALNIGA
FQALLFVAAYRLPGGLAAVVGACQPLLVMALAWRLDSRRPAAMALWASLSGVAGMAALLLSPGSSWDGLGMLAAFGGAVS
MACGTYLTRRWRLSAPVTALTGWQLALGGLMLLPLAMAIDPPLPSLGWTQVAGYAYLALFGALLAYLLWFRGIARLSPVA
VSSLGLLSPLTAVILGWALLGQALSAQSLLGMAVVLASVLAVQWGMMNAAPK

Sequences:

>Translated_292_residues
MSAKTEAGHWRDVLLTALTPVIWGSTYIVTTQLLPPDRPFTAALLRVLPAGLLLVWMGGWRPRASEWGRLLILSALNIGA
FQALLFVAAYRLPGGLAAVVGACQPLLVMALAWRLDSRRPAAMALWASLSGVAGMAALLLSPGSSWDGLGMLAAFGGAVS
MACGTYLTRRWRLSAPVTALTGWQLALGGLMLLPLAMAIDPPLPSLGWTQVAGYAYLALFGALLAYLLWFRGIARLSPVA
VSSLGLLSPLTAVILGWALLGQALSAQSLLGMAVVLASVLAVQWGMMNAAPK
>Mature_291_residues
SAKTEAGHWRDVLLTALTPVIWGSTYIVTTQLLPPDRPFTAALLRVLPAGLLLVWMGGWRPRASEWGRLLILSALNIGAF
QALLFVAAYRLPGGLAAVVGACQPLLVMALAWRLDSRRPAAMALWASLSGVAGMAALLLSPGSSWDGLGMLAAFGGAVSM
ACGTYLTRRWRLSAPVTALTGWQLALGGLMLLPLAMAIDPPLPSLGWTQVAGYAYLALFGALLAYLLWFRGIARLSPVAV
SSLGLLSPLTAVILGWALLGQALSAQSLLGMAVVLASVLAVQWGMMNAAPK

Specific function: Involved in pectinase, cellulase, and blue pigment regulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30654; Mature: 30523

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKTEAGHWRDVLLTALTPVIWGSTYIVTTQLLPPDRPFTAALLRVLPAGLLLVWMGGW
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
RPRASEWGRLLILSALNIGAFQALLFVAAYRLPGGLAAVVGACQPLLVMALAWRLDSRRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
AAMALWASLSGVAGMAALLLSPGSSWDGLGMLAAFGGAVSMACGTYLTRRWRLSAPVTAL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
TGWQLALGGLMLLPLAMAIDPPLPSLGWTQVAGYAYLALFGALLAYLLWFRGIARLSPVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VSSLGLLSPLTAVILGWALLGQALSAQSLLGMAVVLASVLAVQWGMMNAAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAKTEAGHWRDVLLTALTPVIWGSTYIVTTQLLPPDRPFTAALLRVLPAGLLLVWMGGW
CCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC
RPRASEWGRLLILSALNIGAFQALLFVAAYRLPGGLAAVVGACQPLLVMALAWRLDSRRP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
AAMALWASLSGVAGMAALLLSPGSSWDGLGMLAAFGGAVSMACGTYLTRRWRLSAPVTAL
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
TGWQLALGGLMLLPLAMAIDPPLPSLGWTQVAGYAYLALFGALLAYLLWFRGIARLSPVA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VSSLGLLSPLTAVILGWALLGQALSAQSLLGMAVVLASVLAVQWGMMNAAPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8022282 [H]