| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497196
Identifier: 34497196
GI number: 34497196
Start: 1891011
End: 1891610
Strand: Direct
Name: 34497196
Synonym: CV_1741
Alternate gene names: NA
Gene position: 1891011-1891610 (Clockwise)
Preceding gene: 34497195
Following gene: 34497197
Centisome position: 39.8
GC content: 68.5
Gene sequence:
>600_bases GTGAGCCGGCCTGAGCCGCCCGTGAGCCGGGATCCCTGGCTGGAGCGCTGGCTGCCCTTGTTGCGGGAGGCGGGCGGACA AGGGCCGGTGCTGGAGATAGGGTGCGGAGAGGGGGAAGATTCGCGGGCGCTGGCGGAGGCGGGGGTGCGGCTGATCGCTT TCGACCTGTCGGCCGACGCGGTGGCCGCGGCATCGGCCCGCGCGCCCGGCGCCAGATTCGTTTGCCAGGATGTCAGGCAA GCCTTTCCCCTGGGTGGCGAGAGGGCCGGCGCGGTAGTGGCCAGCCTGTCCCTGCATTACTTCCCTTGGGATGAAACAGT GGAGATCGTGGAGCGCATCCGCGACTGCCTGCCGCCCGGCGGCAAGCTGTTGTGCCGGCTGAACGCGACTGACGACCACC ATTACGGCGCCAGCGGCCATCCTGAGATCGCGCCCGATTTTTATCTGGTCGATGGCGAGCCCAAGCGCTTTTTCGACGAG CGGTCGGCGCGCGCGCTGTTCGCCGACGGCTGGCGCATTCTGTCGCTGGAGCATCGCGTCAGCGGCAAGTACGCGCTGCC CAAGGCTTTGTGGGAGGCCGCGCTGGAAAAGACCGGTTGA
Upstream 100 bases:
>100_bases ACGCGCTGAAGCCGGCTTATGCCGCCTATCTGGCAAACGGCAATTTCAGCGCCGATGGCAAGCAGCGCCGCCCGCTGGCC GATTTCCTGGGCGAGACGCG
Downstream 100 bases:
>100_bases AGCGGCTTGGTCGGTGCGCGCGGCGAATCCGGTCATTGGCGAAAATGCTGGAAAAATCGGTTACAATGCCCGATTCGCTA TCCATACCCACAGCCAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSRPEPPVSRDPWLERWLPLLREAGGQGPVLEIGCGEGEDSRALAEAGVRLIAFDLSADAVAAASARAPGARFVCQDVRQ AFPLGGERAGAVVASLSLHYFPWDETVEIVERIRDCLPPGGKLLCRLNATDDHHYGASGHPEIAPDFYLVDGEPKRFFDE RSARALFADGWRILSLEHRVSGKYALPKALWEAALEKTG
Sequences:
>Translated_199_residues MSRPEPPVSRDPWLERWLPLLREAGGQGPVLEIGCGEGEDSRALAEAGVRLIAFDLSADAVAAASARAPGARFVCQDVRQ AFPLGGERAGAVVASLSLHYFPWDETVEIVERIRDCLPPGGKLLCRLNATDDHHYGASGHPEIAPDFYLVDGEPKRFFDE RSARALFADGWRILSLEHRVSGKYALPKALWEAALEKTG >Mature_198_residues SRPEPPVSRDPWLERWLPLLREAGGQGPVLEIGCGEGEDSRALAEAGVRLIAFDLSADAVAAASARAPGARFVCQDVRQA FPLGGERAGAVVASLSLHYFPWDETVEIVERIRDCLPPGGKLLCRLNATDDHHYGASGHPEIAPDFYLVDGEPKRFFDER SARALFADGWRILSLEHRVSGKYALPKALWEAALEKTG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21730; Mature: 21599
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPEPPVSRDPWLERWLPLLREAGGQGPVLEIGCGEGEDSRALAEAGVRLIAFDLSADA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCEEEEEECCCCH VAAASARAPGARFVCQDVRQAFPLGGERAGAVVASLSLHYFPWDETVEIVERIRDCLPPG HHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHEEEEEEEEECCCHHHHHHHHHHHHHCCCC GKLLCRLNATDDHHYGASGHPEIAPDFYLVDGEPKRFFDERSARALFADGWRILSLEHRV CEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCEEECCCEEEEEEEHHC SGKYALPKALWEAALEKTG CCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SRPEPPVSRDPWLERWLPLLREAGGQGPVLEIGCGEGEDSRALAEAGVRLIAFDLSADA CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCEEEEEECCCCH VAAASARAPGARFVCQDVRQAFPLGGERAGAVVASLSLHYFPWDETVEIVERIRDCLPPG HHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHEEEEEEEEECCCHHHHHHHHHHHHHCCCC GKLLCRLNATDDHHYGASGHPEIAPDFYLVDGEPKRFFDERSARALFADGWRILSLEHRV CEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCEEECCCEEEEEEEHHC SGKYALPKALWEAALEKTG CCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA