| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is hylD [H]
Identifier: 34497191
GI number: 34497191
Start: 1879136
End: 1880284
Strand: Direct
Name: hylD [H]
Synonym: CV_1736
Alternate gene names: 34497191
Gene position: 1879136-1880284 (Clockwise)
Preceding gene: 34497190
Following gene: 34497192
Centisome position: 39.55
GC content: 52.39
Gene sequence:
>1149_bases TTGAAACCGCCTTCAACTCATGGCGGACGTCTGATTTGGGCCAGTGCCGCGGCGGTGCTTGGCGCTGGTGTCTGGGCAGC GAATGCTCCTTTGGATCAGATTACTCGCGGATCGGGCCAAGTAATCGCAAGCTCTCACACGCAGATCGTACAAGCGGCTG ATGGCGGCACTATGCAGCACCTGTATGTGCGAGAGGGGGATAGGGTCAAGCGTGGCCAGCTTTTAGCAGAGATGGACCGA GCTAGAGCCGAATCGATGGTTAAGGAAAGCGAGGCTAGAGCTGCGGCGTTGTATGCCAATATCTCTCGCTTGAAAGCAGA AGTATTTGGAGGCGAGCCGCAATTTCCGGTTGAGGTGAACGGGTATCCAGAGTTTCAGCGCAACCAGAGCATTTTGTTTA TCAAGCGGCAGGCGGCAATACGCGAGGAGCTGAGCTCGTTGCAGTCCTCGCTGGCCATAGTCAAGAACGAATTGGACATG AATCTGCCGTTGGTGAAGCAGGGTGATGTCAGTAGGGCGGATATTCTCCGCTTGCAGCGTCAGATGGCTGAGCTGAGCGG GCAAATTACCAATAGAAAAAACAAATACTTGCAAGATAGTCAAACGGAATTGTCCAAGGCGGAAGAGGACTTGGCTTCTG TATCGCAGATCAAGGCGCAAAGGCAAGACGCGCTCAATAATACTCGTCTATCCGCACCGGTCGATGGCGTGATCAAGAGT GTCCGGATGACCACGCCGGGTGCAGTGTTGAAGCCTGGCGAGGAGTTATTGTCGATTGTGCCAGCTGGCGATGAGCTTGT GGTGGAAGCCAAGATCAAGCCCGCTGATATCGCATATCTAAAAAAAGGCCTACCGGCCACAGTTAAGTTTGATGCTTGGG ACTACAGCATCTACGGTGCGTTCAAGGGGGTGGTGAGCTATATCAGCGCTGATACCTTGACGGAAGAGGGCAAGCACGGC GATCAGTTGTTCTATCGGGTGAAGATTAGTTTGCCCAGGCAGAATTTCTTGAACGTCAAGGGGAAGTTGATTGAACTGCA ACCGGGCATGACTGCTCAGGTTGATATAAAGACAGGGACGAGAACAGTCCTGCAATATCTGACAAAACCTATTACCAAGA CTTTGTTGGATTCCATGGGTGAGCGCTAA
Upstream 100 bases:
>100_bases CTCGAGATATTGTTTTGGCCAAACTGCAGGGTAATGCCCGTGCGCAGCAAACTGTAGAAGCGAATTGATTTTCATGAATG TCCTCAAGCAGCAACGAACA
Downstream 100 bases:
>100_bases AGCACATCGCCCTTTATTTTCGTGATGAATATTAATTGTTTAGGGGTTTTCTGGCATGGCTATAAAAAAATCGGCACCGG CTCGCAGCGTTTCTGGTGTT
Product: secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKPPSTHGGRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQHLYVREGDRVKRGQLLAEMDR ARAESMVKESEARAAALYANISRLKAEVFGGEPQFPVEVNGYPEFQRNQSILFIKRQAAIREELSSLQSSLAIVKNELDM NLPLVKQGDVSRADILRLQRQMAELSGQITNRKNKYLQDSQTELSKAEEDLASVSQIKAQRQDALNNTRLSAPVDGVIKS VRMTTPGAVLKPGEELLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGAFKGVVSYISADTLTEEGKHG DQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGTRTVLQYLTKPITKTLLDSMGER
Sequences:
>Translated_382_residues MKPPSTHGGRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQHLYVREGDRVKRGQLLAEMDR ARAESMVKESEARAAALYANISRLKAEVFGGEPQFPVEVNGYPEFQRNQSILFIKRQAAIREELSSLQSSLAIVKNELDM NLPLVKQGDVSRADILRLQRQMAELSGQITNRKNKYLQDSQTELSKAEEDLASVSQIKAQRQDALNNTRLSAPVDGVIKS VRMTTPGAVLKPGEELLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGAFKGVVSYISADTLTEEGKHG DQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGTRTVLQYLTKPITKTLLDSMGER >Mature_382_residues MKPPSTHGGRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQHLYVREGDRVKRGQLLAEMDR ARAESMVKESEARAAALYANISRLKAEVFGGEPQFPVEVNGYPEFQRNQSILFIKRQAAIREELSSLQSSLAIVKNELDM NLPLVKQGDVSRADILRLQRQMAELSGQITNRKNKYLQDSQTELSKAEEDLASVSQIKAQRQDALNNTRLSAPVDGVIKS VRMTTPGAVLKPGEELLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGAFKGVVSYISADTLTEEGKHG DQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGTRTVLQYLTKPITKTLLDSMGER
Specific function: CyaD is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR010129 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 41843; Mature: 41843
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPSTHGGRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQH CCCCCCCCCEEEEEHHHHHHHCCHHCCCCCHHHHCCCCCCEEECCCCEEEEECCCCCEEE LYVREGDRVKRGQLLAEMDRARAESMVKESEARAAALYANISRLKAEVFGGEPQFPVEVN EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC GYPEFQRNQSILFIKRQAAIREELSSLQSSLAIVKNELDMNLPLVKQGDVSRADILRLQR CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHH QMAELSGQITNRKNKYLQDSQTELSKAEEDLASVSQIKAQRQDALNNTRLSAPVDGVIKS HHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VRMTTPGAVLKPGEELLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGA HHCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCEEEECCCCCHHHHH FKGVVSYISADTLTEEGKHGDQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGT HHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHCCCCCEEEEECCCCEEEEEECCCH RTVLQYLTKPITKTLLDSMGER HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPPSTHGGRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQH CCCCCCCCCEEEEEHHHHHHHCCHHCCCCCHHHHCCCCCCEEECCCCEEEEECCCCCEEE LYVREGDRVKRGQLLAEMDRARAESMVKESEARAAALYANISRLKAEVFGGEPQFPVEVN EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEC GYPEFQRNQSILFIKRQAAIREELSSLQSSLAIVKNELDMNLPLVKQGDVSRADILRLQR CCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHH QMAELSGQITNRKNKYLQDSQTELSKAEEDLASVSQIKAQRQDALNNTRLSAPVDGVIKS HHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH VRMTTPGAVLKPGEELLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGA HHCCCCCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCEEEECCCCCHHHHH FKGVVSYISADTLTEEGKHGDQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGT HHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHCCCCCEEEEECCCCEEEEEECCCH RTVLQYLTKPITKTLLDSMGER HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]