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The map label for this gene is ydiU [C]

Identifier: 34497188

GI number: 34497188

Start: 1874026

End: 1875462

Strand: Reverse

Name: ydiU [C]

Synonym: CV_1733

Alternate gene names: 34497188

Gene position: 1875462-1874026 (Counterclockwise)

Preceding gene: 34497193

Following gene: 34497187

Centisome position: 39.47

GC content: 72.03

Gene sequence:

>1437_bases
CTGCCCGAGGCCTGGGCGCCGGTGCGGCCGGAAACGCCGCCCGCGCCGGAACTGCTTTACTGGAACGCCGAACTGGCCGA
TGAGCTGGGCCTGGACGCCGGCCAGACCGACAAGGGCGAACTGGCGCGGCTGTTCTCCGGCGCGGACATCCCCGAAGGCG
CGCAACCGATCGCCCAGGCCTATGCCGGCCACCAGTTCGGCGGCCTGTCGCCGTCGCTGGGCGACGGGCGCGCGCTGCTC
TTGGGCGAAGTGACGGACCGCAACGGCCAGCGCCGCGACATCGCCCTCAAGGGCAGCGGCCAGACGCCGTTCTCGCGCCG
CGGCGACGGCAAGGCCGCCGTCGGCCCGATGCTGAGGGAGCTGATCGTCGGCGAGGCGATGCAGGCGCTGGGCATTCCCA
CCACCCGCGCGCTGGCGGTGACGACCACCGGCGAGCCGGTCTACCGCGAACGGCCGCTGCCCGGCGCGGTGCTGACCCGC
GTCGCCGCCAGCCACCTGCGCGTCGGCACCTTCCAGTACTTCGCCATCCGCGGCGAAACCGCGATGCTGAACAAGCTGGC
CGACTACACCATCGCCCGCCACTACCCGCAGCTGGCCGGCCGGGACGGCCGCCACCTGGCGCTGCTGGCCGCCGTGGCGG
AGCGCCAGGCGGCGCTGATCGCCCGCTGGATGCACGCTGGCTTCATCCACGGCGTGATGAACACCGACAATATGGCGCTG
TCCGGCGAAACCATAGACTACGGCCCCTGCGCCTTCATGGACGCCCACTACCCCGGCACCGTGTTCAGCTCGATAGACCA
CCAGGGCCGCTACGCCTACGGCAACCAGCCCGCCATCGCCCAGTGGAATCTGGCCCGCTTCGCCGAGACCCTGCTGCCGC
TGATCTCCCCCGACGATCCGGCCGCCGCCGTGCCGGCCGCGACCGAAATCGTCGAAGGCTTCGAAGACCTGTACCAGCGC
CGCTGGCTGGAGCAGGCCCGCCGCAAGCTGGGCTTGGAAGGCGAGCGCGACGACGACCAGGCGCTGGCCGACGACTGGCT
GATGCTGCTGGCCGCCCACGGCGTCGACCACACGCTGGCCTGGCGCTACCTGGCGGACGAAGCGGAGGGCAAGGGCGAAC
GGCTGGCTGCGTTATTCCCATCTCCGGACGCGCTGACGCCCTGGCTCAAGCAATGGCACGCCCGCCACGTGCCGCGCACC
CGCCGCCCGCCCGACATCGCCGCCGCGATGCGCCGCGAAAGCCCGCTCTACATCCCGCGCAACCACCTGGTGGAGGAAGC
GCTGGACGCCGCCAGCGAGCGCGGCGACATGGGGCCGACGCTGAAGCTGCTGGAAGCGCTGCACCAGCCGTTCGCCGAGC
GCGACGGGCTGGATCGCTACGCTCAGCCGGCGGCGGCGGAGCTGGCGGAGGGCTACAGGACGTTTTGTGGGACGTGA

Upstream 100 bases:

>100_bases
TTACGTCTTGTAAAACTTTTCAGTTAGCATCCAAGCCAACTCATCCAAAATCACGCCAGCCATGATCCGCATCGCCTTCG
ACCATAGCTACGCCCGCGAC

Downstream 100 bases:

>100_bases
CAGAACTGAGCTTTTCGCTGCGCCAAAGCCACTGACTTTCGGCATTGCCAATGCCTTAATGGACATCAAAAACCACTTAC
CTGCCGAGACACCATTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MPEAWAPVRPETPPAPELLYWNAELADELGLDAGQTDKGELARLFSGADIPEGAQPIAQAYAGHQFGGLSPSLGDGRALL
LGEVTDRNGQRRDIALKGSGQTPFSRRGDGKAAVGPMLRELIVGEAMQALGIPTTRALAVTTTGEPVYRERPLPGAVLTR
VAASHLRVGTFQYFAIRGETAMLNKLADYTIARHYPQLAGRDGRHLALLAAVAERQAALIARWMHAGFIHGVMNTDNMAL
SGETIDYGPCAFMDAHYPGTVFSSIDHQGRYAYGNQPAIAQWNLARFAETLLPLISPDDPAAAVPAATEIVEGFEDLYQR
RWLEQARRKLGLEGERDDDQALADDWLMLLAAHGVDHTLAWRYLADEAEGKGERLAALFPSPDALTPWLKQWHARHVPRT
RRPPDIAAAMRRESPLYIPRNHLVEEALDAASERGDMGPTLKLLEALHQPFAERDGLDRYAQPAAAELAEGYRTFCGT

Sequences:

>Translated_478_residues
MPEAWAPVRPETPPAPELLYWNAELADELGLDAGQTDKGELARLFSGADIPEGAQPIAQAYAGHQFGGLSPSLGDGRALL
LGEVTDRNGQRRDIALKGSGQTPFSRRGDGKAAVGPMLRELIVGEAMQALGIPTTRALAVTTTGEPVYRERPLPGAVLTR
VAASHLRVGTFQYFAIRGETAMLNKLADYTIARHYPQLAGRDGRHLALLAAVAERQAALIARWMHAGFIHGVMNTDNMAL
SGETIDYGPCAFMDAHYPGTVFSSIDHQGRYAYGNQPAIAQWNLARFAETLLPLISPDDPAAAVPAATEIVEGFEDLYQR
RWLEQARRKLGLEGERDDDQALADDWLMLLAAHGVDHTLAWRYLADEAEGKGERLAALFPSPDALTPWLKQWHARHVPRT
RRPPDIAAAMRRESPLYIPRNHLVEEALDAASERGDMGPTLKLLEALHQPFAERDGLDRYAQPAAAELAEGYRTFCGT
>Mature_477_residues
PEAWAPVRPETPPAPELLYWNAELADELGLDAGQTDKGELARLFSGADIPEGAQPIAQAYAGHQFGGLSPSLGDGRALLL
GEVTDRNGQRRDIALKGSGQTPFSRRGDGKAAVGPMLRELIVGEAMQALGIPTTRALAVTTTGEPVYRERPLPGAVLTRV
AASHLRVGTFQYFAIRGETAMLNKLADYTIARHYPQLAGRDGRHLALLAAVAERQAALIARWMHAGFIHGVMNTDNMALS
GETIDYGPCAFMDAHYPGTVFSSIDHQGRYAYGNQPAIAQWNLARFAETLLPLISPDDPAAAVPAATEIVEGFEDLYQRR
WLEQARRKLGLEGERDDDQALADDWLMLLAAHGVDHTLAWRYLADEAEGKGERLAALFPSPDALTPWLKQWHARHVPRTR
RPPDIAAAMRRESPLYIPRNHLVEEALDAASERGDMGPTLKLLEALHQPFAERDGLDRYAQPAAAELAEGYRTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family

Homologues:

Organism=Homo sapiens, GI32880229, Length=371, Percent_Identity=37.466307277628, Blast_Score=229, Evalue=3e-60,
Organism=Escherichia coli, GI1787999, Length=456, Percent_Identity=39.4736842105263, Blast_Score=319, Evalue=2e-88,
Organism=Saccharomyces cerevisiae, GI6325034, Length=342, Percent_Identity=33.6257309941521, Blast_Score=175, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1733_CHRVO (Q7NX94)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901403.1
- GeneID:   2551110
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1733
- NMPDR:   fig|243365.1.peg.1733
- HOGENOM:   HBG683993
- OMA:   THIRFGH
- PhylomeDB:   Q7NX94
- BioCyc:   CVIO243365:CV_1733-MONOMER
- HAMAP:   MF_00692
- InterPro:   IPR003846

Pfam domain/function: PF02696 UPF0061

EC number: NA

Molecular weight: Translated: 52252; Mature: 52120

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAWAPVRPETPPAPELLYWNAELADELGLDAGQTDKGELARLFSGADIPEGAQPIAQA
CCCCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH
YAGHQFGGLSPSLGDGRALLLGEVTDRNGQRRDIALKGSGQTPFSRRGDGKAAVGPMLRE
HCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
LIVGEAMQALGIPTTRALAVTTTGEPVYRERPLPGAVLTRVAASHLRVGTFQYFAIRGET
HHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCEEEEEEEECCH
AMLNKLADYTIARHYPQLAGRDGRHLALLAAVAERQAALIARWMHAGFIHGVMNTDNMAL
HHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SGETIDYGPCAFMDAHYPGTVFSSIDHQGRYAYGNQPAIAQWNLARFAETLLPLISPDDP
CCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AAAVPAATEIVEGFEDLYQRRWLEQARRKLGLEGERDDDQALADDWLMLLAAHGVDHTLA
CHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
WRYLADEAEGKGERLAALFPSPDALTPWLKQWHARHVPRTRRPPDIAAAMRRESPLYIPR
HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCH
NHLVEEALDAASERGDMGPTLKLLEALHQPFAERDGLDRYAQPAAAELAEGYRTFCGT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PEAWAPVRPETPPAPELLYWNAELADELGLDAGQTDKGELARLFSGADIPEGAQPIAQA
CCCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH
YAGHQFGGLSPSLGDGRALLLGEVTDRNGQRRDIALKGSGQTPFSRRGDGKAAVGPMLRE
HCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHH
LIVGEAMQALGIPTTRALAVTTTGEPVYRERPLPGAVLTRVAASHLRVGTFQYFAIRGET
HHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCEEEEEEEECCH
AMLNKLADYTIARHYPQLAGRDGRHLALLAAVAERQAALIARWMHAGFIHGVMNTDNMAL
HHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
SGETIDYGPCAFMDAHYPGTVFSSIDHQGRYAYGNQPAIAQWNLARFAETLLPLISPDDP
CCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
AAAVPAATEIVEGFEDLYQRRWLEQARRKLGLEGERDDDQALADDWLMLLAAHGVDHTLA
CHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH
WRYLADEAEGKGERLAALFPSPDALTPWLKQWHARHVPRTRRPPDIAAAMRRESPLYIPR
HHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCH
NHLVEEALDAASERGDMGPTLKLLEALHQPFAERDGLDRYAQPAAAELAEGYRTFCGT
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14500782