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The map label for this gene is mcpB [H]

Identifier: 34497171

GI number: 34497171

Start: 1855286

End: 1857367

Strand: Reverse

Name: mcpB [H]

Synonym: CV_1716

Alternate gene names: 34497171

Gene position: 1857367-1855286 (Counterclockwise)

Preceding gene: 34497173

Following gene: 34497169

Centisome position: 39.09

GC content: 66.57

Gene sequence:

>2082_bases
ATGAGCCAAGCACAAATAAAATGGGGCCGGCTGAGCACCCGCATCACCCTGGTGGCCGCCGCCGCCATTTCCCTGGCGTT
CGCGGCGATGATCGCGCTGATCGCCCGCCTCAACTACACCTCCGCCCTCGATACCGGCTATCAGCTGTCCTCGGAACAGG
CCGACAGCTATGCCAAGGACGCCGAGAACATGATGTCGCAGGGCTTCCTGCTGCCGCGGCATCTGGCCGACACGGTGGCC
GGCATCAAGCGCGCCGGCAGGCCGGATCGCAAGCAGACCGACAACATCATCCAGGAAATGCTGGACCATGCGCCCCAGTC
CATCGGCCTGTGGATGCTGTGGGAACCCAACGCCTTCGACGGCGACGACAATGCCTTCCGCTTCGACTGGCCGCGCCACG
ACCCTACCGGCCGCTACCAGCCTTACATCACCCGCAACGCCCAGGGCAAGGCGCAGATGGACGTGATGATGTCGGCCGAC
CGCATCAAGGACTTCCCCAAGTACAAGGAACATCCGGAAACCTACAAGCCGGATTACGAGAAACCCGGCTGGGGCGATTT
CTACTACGTGCCCAAGCAGCGCGGCCGCGACACCGTCACCGAGCCCTTCCCCTACGAGGTCCAAGGCAAGATGGTGCTGG
AAAGCTCGCTGGCGGTGGTGATCAAGGACGCCGCCGGCAAGATGCTGGGCGTGTCCGCCACCGACGTGGCGCTGGACCAG
TTGCAAAAGCGCTTCGGCCAGATCCAGCCCGGCGGCAACGGCTACATCCGCATCGTCTCCGAGGGCGGGCTCTACGTGGT
CAGCCCCAAGGCGGAACTGCTGGGCAAGCCGGTGCCCAAGGAGGACGCGCTGTTCGCCCACTTGGCGGACGTCAAGAAAG
GCGAGGACTTCGTCTACGAGGACGGCGGCTTCACCCACTTCTTCCATCCGATACGGATAGGCGAAACCGGCCAGTTCTGG
TCGCTGGGCATCAGCATCCCCACTTCGGCGCTCACCGCCGACGCGCGCAAGGCCATGCTCAGCGCCATCGCCATCGGCGT
GGTGGCGCTGGCCTTGATCCTGTTGCTGCTGGCCGGCGTGATCCGCGCCCAAACCCGTCCGCTGAACCGGCTGGCCGACA
CCATGGAGCAACTGGCCGGCGGCGGCGGCGATCTGACCGTGCGCATAGACATCGCCAATCGCGACGAGATCGGCCGCACC
GCCGATGCCTTCAACCGCTTGCTGGACAGCCTGCGCGACATGTTCGGCAAGGTGCGCGAGCAGAGCCGCCAGGTATCGGA
GGCGGCCCTGACCCTGAGCCAGTCGGCCGGGCAGGTGCACGACGCGTCCGCGCAGCAATCCGACGCCGCCACCGCCAGCG
CCGCCAGCGTGGAGCAGGTCACCGTCGGCGCCCAACACATCGCCAACACGGCCCAGCAGGCGGGCGACATCGCCCGGAAA
ACCGGCGCGCTGACCGAGCAAAGCGTGGCCAAGGTCAACCGCGTCACCAGCGAAATCCAGCGCATGACGGACAGCATGCA
CGCGCTGGCGGAACGGATGAACGGCCTGGGCGAGCGCTCCAACGAAGTGACCACCATTGTCGGCGTGATCAAGGACATCG
CCGACCAGACCAATCTCTTGGCGCTGAACGCGGCGATCGAGGCCGCCCGCGCCGGCGAGCTGGGCCGCGGCTTCGCGGTG
GTGGCCGACGAGGTGCGCAACCTGGCCGGGCGCACCGCAGAGGCGACAGTGCAGATCACCCGCATCGTGGACGCGATCAG
CAGCGAAACCCGGCAGGCGGTCAGCGACGTCCAGCACAGCAGCCAGCAAGTGGATCTCAGCGTCGGCATCGCGGAAGAGG
CCAACCAGGCGATGCGGGAGGTGCAGGACTACAACGGCCAGCTGGTCACCAGCATCGTCGACATCGCCTCCGCCACCCGC
GAGCAGTCCAGCGCCAGCGTGGAGATCGCGCAGAACGTCGAGCGCATCAGCAGCATGGCCCAGGGCAACAACCTGGTGGT
GCGGGAAGTCAGCGCCGCGGTGAACCAGCTGCGCGGGCTGGCGGAAGGCTTGGAGCGGCTGGTCGGCCATTTCAAGCTGT
AG

Upstream 100 bases:

>100_bases
GCTCGTTGCCTGTATCGACAGTCAGCCGTTATATTCAATTCAACTAAGAATTTTTACTTAGTTGCTTAATGCATGATCCG
CCACCCACGCAGGAAACGCC

Downstream 100 bases:

>100_bases
TCCGGCCTTGATCCGGCGCGGCCCGGAACAACACCCAGACTGCGATCGCCGCCGGGACTCAGCCCCCGGCGGCCTTCCAC
GCCAGCGCGGCGGCCATCGC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 693; Mature: 692

Protein sequence:

>693_residues
MSQAQIKWGRLSTRITLVAAAAISLAFAAMIALIARLNYTSALDTGYQLSSEQADSYAKDAENMMSQGFLLPRHLADTVA
GIKRAGRPDRKQTDNIIQEMLDHAPQSIGLWMLWEPNAFDGDDNAFRFDWPRHDPTGRYQPYITRNAQGKAQMDVMMSAD
RIKDFPKYKEHPETYKPDYEKPGWGDFYYVPKQRGRDTVTEPFPYEVQGKMVLESSLAVVIKDAAGKMLGVSATDVALDQ
LQKRFGQIQPGGNGYIRIVSEGGLYVVSPKAELLGKPVPKEDALFAHLADVKKGEDFVYEDGGFTHFFHPIRIGETGQFW
SLGISIPTSALTADARKAMLSAIAIGVVALALILLLLAGVIRAQTRPLNRLADTMEQLAGGGGDLTVRIDIANRDEIGRT
ADAFNRLLDSLRDMFGKVREQSRQVSEAALTLSQSAGQVHDASAQQSDAATASAASVEQVTVGAQHIANTAQQAGDIARK
TGALTEQSVAKVNRVTSEIQRMTDSMHALAERMNGLGERSNEVTTIVGVIKDIADQTNLLALNAAIEAARAGELGRGFAV
VADEVRNLAGRTAEATVQITRIVDAISSETRQAVSDVQHSSQQVDLSVGIAEEANQAMREVQDYNGQLVTSIVDIASATR
EQSSASVEIAQNVERISSMAQGNNLVVREVSAAVNQLRGLAEGLERLVGHFKL

Sequences:

>Translated_693_residues
MSQAQIKWGRLSTRITLVAAAAISLAFAAMIALIARLNYTSALDTGYQLSSEQADSYAKDAENMMSQGFLLPRHLADTVA
GIKRAGRPDRKQTDNIIQEMLDHAPQSIGLWMLWEPNAFDGDDNAFRFDWPRHDPTGRYQPYITRNAQGKAQMDVMMSAD
RIKDFPKYKEHPETYKPDYEKPGWGDFYYVPKQRGRDTVTEPFPYEVQGKMVLESSLAVVIKDAAGKMLGVSATDVALDQ
LQKRFGQIQPGGNGYIRIVSEGGLYVVSPKAELLGKPVPKEDALFAHLADVKKGEDFVYEDGGFTHFFHPIRIGETGQFW
SLGISIPTSALTADARKAMLSAIAIGVVALALILLLLAGVIRAQTRPLNRLADTMEQLAGGGGDLTVRIDIANRDEIGRT
ADAFNRLLDSLRDMFGKVREQSRQVSEAALTLSQSAGQVHDASAQQSDAATASAASVEQVTVGAQHIANTAQQAGDIARK
TGALTEQSVAKVNRVTSEIQRMTDSMHALAERMNGLGERSNEVTTIVGVIKDIADQTNLLALNAAIEAARAGELGRGFAV
VADEVRNLAGRTAEATVQITRIVDAISSETRQAVSDVQHSSQQVDLSVGIAEEANQAMREVQDYNGQLVTSIVDIASATR
EQSSASVEIAQNVERISSMAQGNNLVVREVSAAVNQLRGLAEGLERLVGHFKL
>Mature_692_residues
SQAQIKWGRLSTRITLVAAAAISLAFAAMIALIARLNYTSALDTGYQLSSEQADSYAKDAENMMSQGFLLPRHLADTVAG
IKRAGRPDRKQTDNIIQEMLDHAPQSIGLWMLWEPNAFDGDDNAFRFDWPRHDPTGRYQPYITRNAQGKAQMDVMMSADR
IKDFPKYKEHPETYKPDYEKPGWGDFYYVPKQRGRDTVTEPFPYEVQGKMVLESSLAVVIKDAAGKMLGVSATDVALDQL
QKRFGQIQPGGNGYIRIVSEGGLYVVSPKAELLGKPVPKEDALFAHLADVKKGEDFVYEDGGFTHFFHPIRIGETGQFWS
LGISIPTSALTADARKAMLSAIAIGVVALALILLLLAGVIRAQTRPLNRLADTMEQLAGGGGDLTVRIDIANRDEIGRTA
DAFNRLLDSLRDMFGKVREQSRQVSEAALTLSQSAGQVHDASAQQSDAATASAASVEQVTVGAQHIANTAQQAGDIARKT
GALTEQSVAKVNRVTSEIQRMTDSMHALAERMNGLGERSNEVTTIVGVIKDIADQTNLLALNAAIEAARAGELGRGFAVV
ADEVRNLAGRTAEATVQITRIVDAISSETRQAVSDVQHSSQQVDLSVGIAEEANQAMREVQDYNGQLVTSIVDIASATRE
QSSASVEIAQNVERISSMAQGNNLVVREVSAAVNQLRGLAEGLERLVGHFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=354, Percent_Identity=31.0734463276836, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI2367378, Length=338, Percent_Identity=31.9526627218935, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=335, Percent_Identity=32.5373134328358, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=378, Percent_Identity=30.4232804232804, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1789453, Length=347, Percent_Identity=29.971181556196, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 75136; Mature: 75005

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAQIKWGRLSTRITLVAAAAISLAFAAMIALIARLNYTSALDTGYQLSSEQADSYAKD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHH
AENMMSQGFLLPRHLADTVAGIKRAGRPDRKQTDNIIQEMLDHAPQSIGLWMLWEPNAFD
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCEEEEECCCCCC
GDDNAFRFDWPRHDPTGRYQPYITRNAQGKAQMDVMMSADRIKDFPKYKEHPETYKPDYE
CCCCCEECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KPGWGDFYYVPKQRGRDTVTEPFPYEVQGKMVLESSLAVVIKDAAGKMLGVSATDVALDQ
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHEEEECCCCCEECCCHHHHHHHH
LQKRFGQIQPGGNGYIRIVSEGGLYVVSPKAELLGKPVPKEDALFAHLADVKKGEDFVYE
HHHHHCCCCCCCCCEEEEEECCCEEEECCCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEE
DGGFTHFFHPIRIGETGQFWSLGISIPTSALTADARKAMLSAIAIGVVALALILLLLAGV
CCCEEEEECCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAQTRPLNRLADTMEQLAGGGGDLTVRIDIANRDEIGRTADAFNRLLDSLRDMFGKVRE
HHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSRQVSEAALTLSQSAGQVHDASAQQSDAATASAASVEQVTVGAQHIANTAQQAGDIARK
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGALTEQSVAKVNRVTSEIQRMTDSMHALAERMNGLGERSNEVTTIVGVIKDIADQTNLL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEE
ALNAAIEAARAGELGRGFAVVADEVRNLAGRTAEATVQITRIVDAISSETRQAVSDVQHS
EHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SQQVDLSVGIAEEANQAMREVQDYNGQLVTSIVDIASATREQSSASVEIAQNVERISSMA
CCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QGNNLVVREVSAAVNQLRGLAEGLERLVGHFKL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQAQIKWGRLSTRITLVAAAAISLAFAAMIALIARLNYTSALDTGYQLSSEQADSYAKD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHH
AENMMSQGFLLPRHLADTVAGIKRAGRPDRKQTDNIIQEMLDHAPQSIGLWMLWEPNAFD
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCEEEEECCCCCC
GDDNAFRFDWPRHDPTGRYQPYITRNAQGKAQMDVMMSADRIKDFPKYKEHPETYKPDYE
CCCCCEECCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KPGWGDFYYVPKQRGRDTVTEPFPYEVQGKMVLESSLAVVIKDAAGKMLGVSATDVALDQ
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCHHEEEECCCCCEECCCHHHHHHHH
LQKRFGQIQPGGNGYIRIVSEGGLYVVSPKAELLGKPVPKEDALFAHLADVKKGEDFVYE
HHHHHCCCCCCCCCEEEEEECCCEEEECCCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEE
DGGFTHFFHPIRIGETGQFWSLGISIPTSALTADARKAMLSAIAIGVVALALILLLLAGV
CCCEEEEECCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAQTRPLNRLADTMEQLAGGGGDLTVRIDIANRDEIGRTADAFNRLLDSLRDMFGKVRE
HHHCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QSRQVSEAALTLSQSAGQVHDASAQQSDAATASAASVEQVTVGAQHIANTAQQAGDIARK
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGALTEQSVAKVNRVTSEIQRMTDSMHALAERMNGLGERSNEVTTIVGVIKDIADQTNLL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEE
ALNAAIEAARAGELGRGFAVVADEVRNLAGRTAEATVQITRIVDAISSETRQAVSDVQHS
EHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SQQVDLSVGIAEEANQAMREVQDYNGQLVTSIVDIASATREQSSASVEIAQNVERISSMA
CCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QGNNLVVREVSAAVNQLRGLAEGLERLVGHFKL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]