| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is asnB [H]
Identifier: 34497168
GI number: 34497168
Start: 1852195
End: 1854045
Strand: Direct
Name: asnB [H]
Synonym: CV_1713
Alternate gene names: 34497168
Gene position: 1852195-1854045 (Clockwise)
Preceding gene: 34497167
Following gene: 34497170
Centisome position: 38.98
GC content: 69.48
Gene sequence:
>1851_bases ATGTGTGGAATTGCCGGATGGGTGAGTTTCGAGCGTGATCTGAGCACGCAGCGCGCGGTCGCGGAGACGATGACGAAAAC GATGGCCCTGCGCGGGCCGGACGACGAGGGACTGTGGCTGGACCGCCGCGCGGCGCTGGGGCATCGCCGCCTGTCCATCA TCGACCTGGAGGGCGGCCGGCAGCCGATGACAGCCGACGAGGATGGCAGGACGCTGGCCTGCCTGGTGTACACCGGCGAG GTGTACAACTTCCGGGAGCTGCGCCTTGAGCTGCAGGGCCTGGGCCACGCTTTTCGCACCCGCAGCGACACCGAGGTGGT GCTGCGCGCCTATCTGCAGTGGGGCGAAGCGATGCTGGAGCGGCTGAACGGCATGTACGCGTTCGCGTTGTGGGACGCCC GAGAACAGCGGCTGTTGCTGGTCCGCGACCGGATGGGCGTCAAGCCGCTGTACTACTATCCGATGCCGGACGGCGTGCTG TTCGGCTCCGAGCCCAAGGCCATCCTGGCGCACCCCGAGGCCGAGCGACGGGTGACGGCCGGCGGCCTGCGCGAAATGCT GGATCTGGTGAAGACGCCGGAGGCTGCGGCGTTCGCCGGCATGCACGAGGTGCGGCCCGGTCAGGTGGTGACGATAGACC GTGGAGGCCTGCGCAAGCGCCGCTACTGGCAGCTGGAGGCGCGCGAGCACACCGACGACCTGCCGACCACCATCCGCACC GTGCGCGAGCTGCTGGACGACATCGTCGAACGGCAGATCATCGCCGATGTGCCGCTATGCACGCTGTTGTCCGGCGGGCT GGATTCGTCGGTGGTCACCGCGCTGGCCGCGCGGAGCATGCGGCGCCAGGGCAAGGGAACGGTGCGTTCGTTCTCGGTGG ACTTCGTCAAACACGGCGCCGCGTTCGAGGCCGACTACCTGCGCGGCTCGCCGGACGCGCCCTTCGTGCGCGATCTGGCG GCGCACGCCGGCACCGAGCATAGGGAAATTCTGCTGGAGAGCCGCGAGCTGGCCGATCCGCGCTTGCGCGCCGCGGTGCT GGGCGCGCAGGATCTGCCGCCGGCGTATTGGGGCGACATGCTGCCGTCGCTGTACAAGCTGTTCGAGGCGATCCGGGCGC AATCGACGGTGGCGCTGTCCGGCGAGTCGGCGGACGAGGTGTTCGGCGGCTATCGCTGGTTCCACGACGCCGCCGCGGTG GACGGCGACGCGTTTCCGTGGCTGGCCGGGTCGAGCGGCGCCTTCTTCGACGGCCAGTCGCTGATCGCGCCGGGCCTGCT GCGCGAGCTGGACATGCCGGGCTTCCGCCGCGACAGCTACGCGCAGGCGCTGGCCGAGGTGCCGCGGCTGGCGTCGGACA GCACCCGCGAGCGGCGGATGCGCGAGATCAGCCATATGCACCTGACCCGCTTCGTCCAGGCGCTGCTGGACCGCAAGGAC CGGATGAGCATGGCGGTGGGGCTGGAGGTGAGGGTGCCGTTCTGCGACCACCGGCTGGTGGAGTACGTGTTCAACGCGCC GTGGAGCATGAAGAATTTCGACGGCCGGGAGAAGAGCCTGTTGCGCGCTGCCGGCAAGGACGTGCTGCCGGAGTCCATCG TCCGGCGCGTCAAGAGCCCGTACCCGGCCACCCAGGATCCGGCTTACGAGCAGGCGCTGCGCCAGGGGCTGGCCCGGGTG CTGGACGACTCCCGCTCGCCGGCCTTGCCTTTGCTGGACAAGGCCGCCGCGTGGAAGCTGCTGGACCGGCCATTCGGCAA GACCAGCACCTCGCCGGAGCGCGCCGGGCTGGAAATGGCGCTGGGCCTGGATGAATGGCTGCGCCATCATCAGGTGTCGC TGGACTTGTAA
Upstream 100 bases:
>100_bases CCCGCTTTCGCGGCGGCCCCCTCTGCACTAATTATGCTTTAGGCATAATGCGAGCCGGCGGACCCCTTCGCCCGGCCGCT GACAAGAGGAGAGCCGAACA
Downstream 100 bases:
>100_bases ACCCGCTCAGCGGGGCGGCCGCACCGGCCGTCCCTGAATGGGCGTGGACAGGATGATGGCGGTGCGCGTCTCGCCCAGAT CGTTCAGCTGCGCCACCAGC
Product: asparagine synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MCGIAGWVSFERDLSTQRAVAETMTKTMALRGPDDEGLWLDRRAALGHRRLSIIDLEGGRQPMTADEDGRTLACLVYTGE VYNFRELRLELQGLGHAFRTRSDTEVVLRAYLQWGEAMLERLNGMYAFALWDAREQRLLLVRDRMGVKPLYYYPMPDGVL FGSEPKAILAHPEAERRVTAGGLREMLDLVKTPEAAAFAGMHEVRPGQVVTIDRGGLRKRRYWQLEAREHTDDLPTTIRT VRELLDDIVERQIIADVPLCTLLSGGLDSSVVTALAARSMRRQGKGTVRSFSVDFVKHGAAFEADYLRGSPDAPFVRDLA AHAGTEHREILLESRELADPRLRAAVLGAQDLPPAYWGDMLPSLYKLFEAIRAQSTVALSGESADEVFGGYRWFHDAAAV DGDAFPWLAGSSGAFFDGQSLIAPGLLRELDMPGFRRDSYAQALAEVPRLASDSTRERRMREISHMHLTRFVQALLDRKD RMSMAVGLEVRVPFCDHRLVEYVFNAPWSMKNFDGREKSLLRAAGKDVLPESIVRRVKSPYPATQDPAYEQALRQGLARV LDDSRSPALPLLDKAAAWKLLDRPFGKTSTSPERAGLEMALGLDEWLRHHQVSLDL
Sequences:
>Translated_616_residues MCGIAGWVSFERDLSTQRAVAETMTKTMALRGPDDEGLWLDRRAALGHRRLSIIDLEGGRQPMTADEDGRTLACLVYTGE VYNFRELRLELQGLGHAFRTRSDTEVVLRAYLQWGEAMLERLNGMYAFALWDAREQRLLLVRDRMGVKPLYYYPMPDGVL FGSEPKAILAHPEAERRVTAGGLREMLDLVKTPEAAAFAGMHEVRPGQVVTIDRGGLRKRRYWQLEAREHTDDLPTTIRT VRELLDDIVERQIIADVPLCTLLSGGLDSSVVTALAARSMRRQGKGTVRSFSVDFVKHGAAFEADYLRGSPDAPFVRDLA AHAGTEHREILLESRELADPRLRAAVLGAQDLPPAYWGDMLPSLYKLFEAIRAQSTVALSGESADEVFGGYRWFHDAAAV DGDAFPWLAGSSGAFFDGQSLIAPGLLRELDMPGFRRDSYAQALAEVPRLASDSTRERRMREISHMHLTRFVQALLDRKD RMSMAVGLEVRVPFCDHRLVEYVFNAPWSMKNFDGREKSLLRAAGKDVLPESIVRRVKSPYPATQDPAYEQALRQGLARV LDDSRSPALPLLDKAAAWKLLDRPFGKTSTSPERAGLEMALGLDEWLRHHQVSLDL >Mature_616_residues MCGIAGWVSFERDLSTQRAVAETMTKTMALRGPDDEGLWLDRRAALGHRRLSIIDLEGGRQPMTADEDGRTLACLVYTGE VYNFRELRLELQGLGHAFRTRSDTEVVLRAYLQWGEAMLERLNGMYAFALWDAREQRLLLVRDRMGVKPLYYYPMPDGVL FGSEPKAILAHPEAERRVTAGGLREMLDLVKTPEAAAFAGMHEVRPGQVVTIDRGGLRKRRYWQLEAREHTDDLPTTIRT VRELLDDIVERQIIADVPLCTLLSGGLDSSVVTALAARSMRRQGKGTVRSFSVDFVKHGAAFEADYLRGSPDAPFVRDLA AHAGTEHREILLESRELADPRLRAAVLGAQDLPPAYWGDMLPSLYKLFEAIRAQSTVALSGESADEVFGGYRWFHDAAAV DGDAFPWLAGSSGAFFDGQSLIAPGLLRELDMPGFRRDSYAQALAEVPRLASDSTRERRMREISHMHLTRFVQALLDRKD RMSMAVGLEVRVPFCDHRLVEYVFNAPWSMKNFDGREKSLLRAAGKDVLPESIVRRVKSPYPATQDPAYEQALRQGLARV LDDSRSPALPLLDKAAAWKLLDRPFGKTSTSPERAGLEMALGLDEWLRHHQVSLDL
Specific function: Asparagine synthetase involved in sporulation [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI168229248, Length=425, Percent_Identity=28, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI168229252, Length=425, Percent_Identity=28, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI168229250, Length=425, Percent_Identity=28, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI296010848, Length=396, Percent_Identity=27.2727272727273, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI296010852, Length=329, Percent_Identity=27.0516717325228, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI296010850, Length=329, Percent_Identity=27.0516717325228, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1786889, Length=398, Percent_Identity=30.9045226130653, Blast_Score=166, Evalue=3e-42, Organism=Caenorhabditis elegans, GI71993933, Length=537, Percent_Identity=27.3743016759777, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25147557, Length=537, Percent_Identity=27.3743016759777, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6325403, Length=599, Percent_Identity=26.5442404006678, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321563, Length=600, Percent_Identity=26.3333333333333, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI45553209, Length=572, Percent_Identity=27.0979020979021, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 69043; Mature: 69043
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIAGWVSFERDLSTQRAVAETMTKTMALRGPDDEGLWLDRRAALGHRRLSIIDLEGGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCEEEEEEECCCC QPMTADEDGRTLACLVYTGEVYNFRELRLELQGLGHAFRTRSDTEVVLRAYLQWGEAMLE CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH RLNGMYAFALWDAREQRLLLVRDRMGVKPLYYYPMPDGVLFGSEPKAILAHPEAERRVTA HHCCEEEEEEECCCCCCEEEEHHCCCCCEEEEECCCCCEEECCCCCEEEECCCHHHHHHH GGLREMLDLVKTPEAAAFAGMHEVRPGQVVTIDRGGLRKRRYWQLEAREHTDDLPTTIRT HHHHHHHHHHCCCCHHHHHCHHHCCCCCEEEECCCCCCCCCEEEEECHHCCCCCHHHHHH VRELLDDIVERQIIADVPLCTLLSGGLDSSVVTALAARSMRRQGKGTVRSFSVDFVKHGA HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEEHHHHHCCC AFEADYLRGSPDAPFVRDLAAHAGTEHREILLESRELADPRLRAAVLGAQDLPPAYWGDM CCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH LPSLYKLFEAIRAQSTVALSGESADEVFGGYRWFHDAAAVDGDAFPWLAGSSGAFFDGQS HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCH LIAPGLLRELDMPGFRRDSYAQALAEVPRLASDSTRERRMREISHMHLTRFVQALLDRKD HHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH RMSMAVGLEVRVPFCDHRLVEYVFNAPWSMKNFDGREKSLLRAAGKDVLPESIVRRVKSP HHHHEECEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCC YPATQDPAYEQALRQGLARVLDDSRSPALPLLDKAAAWKLLDRPFGKTSTSPERAGLEMA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHC LGLDEWLRHHQVSLDL CCHHHHHHHHCCCCCC >Mature Secondary Structure MCGIAGWVSFERDLSTQRAVAETMTKTMALRGPDDEGLWLDRRAALGHRRLSIIDLEGGR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHCCCEEEEEEECCCC QPMTADEDGRTLACLVYTGEVYNFRELRLELQGLGHAFRTRSDTEVVLRAYLQWGEAMLE CCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH RLNGMYAFALWDAREQRLLLVRDRMGVKPLYYYPMPDGVLFGSEPKAILAHPEAERRVTA HHCCEEEEEEECCCCCCEEEEHHCCCCCEEEEECCCCCEEECCCCCEEEECCCHHHHHHH GGLREMLDLVKTPEAAAFAGMHEVRPGQVVTIDRGGLRKRRYWQLEAREHTDDLPTTIRT HHHHHHHHHHCCCCHHHHHCHHHCCCCCEEEECCCCCCCCCEEEEECHHCCCCCHHHHHH VRELLDDIVERQIIADVPLCTLLSGGLDSSVVTALAARSMRRQGKGTVRSFSVDFVKHGA HHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHEEHHHHHCCC AFEADYLRGSPDAPFVRDLAAHAGTEHREILLESRELADPRLRAAVLGAQDLPPAYWGDM CCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHH LPSLYKLFEAIRAQSTVALSGESADEVFGGYRWFHDAAAVDGDAFPWLAGSSGAFFDGQS HHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCH LIAPGLLRELDMPGFRRDSYAQALAEVPRLASDSTRERRMREISHMHLTRFVQALLDRKD HHCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH RMSMAVGLEVRVPFCDHRLVEYVFNAPWSMKNFDGREKSLLRAAGKDVLPESIVRRVKSP HHHHEECEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCC YPATQDPAYEQALRQGLARVLDDSRSPALPLLDKAAAWKLLDRPFGKTSTSPERAGLEMA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHC LGLDEWLRHHQVSLDL CCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353931; 9384377; 10498721 [H]