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The map label for this gene is flgF2 [H]

Identifier: 34497160

GI number: 34497160

Start: 1843628

End: 1844359

Strand: Direct

Name: flgF2 [H]

Synonym: CV_1705

Alternate gene names: 34497160

Gene position: 1843628-1844359 (Clockwise)

Preceding gene: 34497159

Following gene: 34497161

Centisome position: 38.8

GC content: 69.4

Gene sequence:

>732_bases
ATGGACAAGCTGATCTACACCGCGATGAGCGGCGCCGGCCGCATGCTGCGCGCGCAGCAGATCCACGCCAACAACCTGGC
CAACGCCGAAACCGGCGGCTTCCGCGCCGACATCGACACCGCCGTCAGCCAGCAGGTGCCGGGCTACGGCTACGACGCGC
GCCTGCTGAGTCAGAACGCGCCGACCGCGTTGTCCGACCGCAACGGCACGGTGGTGGAAACCGGCCGCGACCTGGACATC
GCGCTGCAGGGCGACGGCTTTTTCGCCGTTTCCGCGCCTGACGGCAGCGAGGCCTACACCCGCGCCGGCAGCATGGTGGC
GGGGCCGGACGGCACGCTCAGCGTCAATGGCCACCCGGTGTTGGGCGACGGCGGCCCGATCCGCCTGCCCGAAGGCTTCC
TCAAGGTCAGCGTGGCCGCCGACGGCACGATTTCCGTGCTGAACCCGGACGACGCCGCGATGCAGCCGGTGGACAAGCTC
AAGCTGGTCAAGCCCGATCCGCGCGAGGTGGGCAAGCGCCCCGACGGGCTGATCGCCGCCCGCCAGGGCGGGCCGCTGCC
GGTGGACGACAGCGTGCGGGTGCAGAGCGGCCACCTGGAGCGCAGCAATGTGTCCGCGGTGGAGGAAATGGTGTCCACCA
TGACGCTCAACCGCAATTTCGAGATGCAGATGAAACTGTTCAACGCCGCCAGCGACATGAACGAGGCGGGCAACCGCCTG
GTGCGCGGCTGA

Upstream 100 bases:

>100_bases
GTGTCGCTGATGACCGCGCAGCGTAACTACCAGGCCAACACCAAGGTGATCTCCACCGAGAACCAGGTGATGCAGGCGCT
GATGCAGGCGGTGTAAGGCG

Downstream 100 bases:

>100_bases
ACGGCCGACTGATTGGGAGATACGATGAATCCGGCACTTTGGATCAGCAAGACCGGCATACAGGCGCAGGACGCGCGCCT
GACCGCCATCGCCAACAACC

Product: flagellar basal-body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDTAVSQQVPGYGYDARLLSQNAPTALSDRNGTVVETGRDLDI
ALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTLSVNGHPVLGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKL
KLVKPDPREVGKRPDGLIAARQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRL
VRG

Sequences:

>Translated_243_residues
MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDTAVSQQVPGYGYDARLLSQNAPTALSDRNGTVVETGRDLDI
ALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTLSVNGHPVLGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKL
KLVKPDPREVGKRPDGLIAARQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRL
VRG
>Mature_243_residues
MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDTAVSQQVPGYGYDARLLSQNAPTALSDRNGTVVETGRDLDI
ALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTLSVNGHPVLGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKL
KLVKPDPREVGKRPDGLIAARQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRL
VRG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=249, Percent_Identity=43.7751004016064, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1787318, Length=266, Percent_Identity=27.8195488721804, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25606; Mature: 25606

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDTAVSQQVPGYGYDARLLSQNA
CCCEEEEECCCCCCCEEHHHHHCCCCCCCCCCCEECCHHHHHHHCCCCCCCCHHEECCCC
PTALSDRNGTVVETGRDLDIALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTLSVNGHPV
CCEECCCCCEEEECCCCEEEEEECCCEEEEECCCCCHHHHHCCCEEECCCCEEEECCCEE
LGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKLKLVKPDPREVGKRPDGLIAA
ECCCCCEECCCCEEEEEEECCCEEEEECCCHHHHCCHHHEEECCCCHHHHCCCCCCEEEE
RQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRL
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHC
VRG
CCC
>Mature Secondary Structure
MDKLIYTAMSGAGRMLRAQQIHANNLANAETGGFRADIDTAVSQQVPGYGYDARLLSQNA
CCCEEEEECCCCCCCEEHHHHHCCCCCCCCCCCEECCHHHHHHHCCCCCCCCHHEECCCC
PTALSDRNGTVVETGRDLDIALQGDGFFAVSAPDGSEAYTRAGSMVAGPDGTLSVNGHPV
CCEECCCCCEEEECCCCEEEEEECCCEEEEECCCCCHHHHHCCCEEECCCCEEEECCCEE
LGDGGPIRLPEGFLKVSVAADGTISVLNPDDAAMQPVDKLKLVKPDPREVGKRPDGLIAA
ECCCCCEECCCCEEEEEEECCCEEEEECCCHHHHCCHHHEEECCCCHHHHCCCCCCEEEE
RQGGPLPVDDSVRVQSGHLERSNVSAVEEMVSTMTLNRNFEMQMKLFNAASDMNEAGNRL
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHC
VRG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2129540; 11677609; 2193164; 2181149 [H]