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The map label for this gene is yciO [C]

Identifier: 34497149

GI number: 34497149

Start: 1832489

End: 1833112

Strand: Direct

Name: yciO [C]

Synonym: CV_1694

Alternate gene names: 34497149

Gene position: 1832489-1833112 (Clockwise)

Preceding gene: 34497148

Following gene: 34497150

Centisome position: 38.57

GC content: 66.99

Gene sequence:

>624_bases
ATGGCGCAATTCTTCGTGATCCATCCCGAGAACCCCCAGGCCAGGCTGATCCGCGAGGCGGTGAAGATCCTGCGCGAGGG
CGGGGTGATCGCCTATCCCACCGACTCCTGTTACGCGCTGGGCTGCGCGCTCGGCGACAAGGAGGCGATGGAGCGGATTC
TGGAGATCCGCGGCGTGGACCTGAAGCAGCGGCTGATGACGCTGGTGTGCCACGATCTGTCCGAACTGGCCAACTACGCC
AAGGTGGACAACCGCCAGTACCGGCTGCTGAAGAGCACCACGCCGGGCAGCTACACCTTCATCCTGCAGGCGACGCGCGA
GGTGCCGCGCCGCACGCTCCACCCCAAGCGGGCCACCATCGGCCTGCGCGTGCCGGACCACAAGGTGGCGCTGGCCTTGT
TGGAGGAGCTGGGCGAACCCATCTTGTCCTGTACCCTGATGCTGCCGGGCGACGACGTCCCGATGTCCGACCCCTACGAA
ATCCGTGAGCGGCTGGAGCATCTGGTGGACGCGGTGCTGGACGGCGGCTGGTGCGGCACCGAGCCGACCACCGTGGTCGA
CATGACCGACGGTGTCGAGCTGGTGCGCGAAGGCAAGGGCGCGCTGGCGCCGTTCGGTTTTTGA

Upstream 100 bases:

>100_bases
CGGCCACACCGAGGACCTGCCGCCCATCTGCAGGCCGATCTGGCGCGAGCTGGAAGCGCGCATCCTCCGGCCCGCTGACT
GACACCACAAGGACAAGAAC

Downstream 100 bases:

>100_bases
TTCATCTTTAGTCTGTTAGGAAATCATGCAGGAACTCTCCCTGATCCAGACGCTGGCGGTATCGATACTGCCGGTGCTGT
TCGCCATCACCATGCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAQFFVIHPENPQARLIREAVKILREGGVIAYPTDSCYALGCALGDKEAMERILEIRGVDLKQRLMTLVCHDLSELANYA
KVDNRQYRLLKSTTPGSYTFILQATREVPRRTLHPKRATIGLRVPDHKVALALLEELGEPILSCTLMLPGDDVPMSDPYE
IRERLEHLVDAVLDGGWCGTEPTTVVDMTDGVELVREGKGALAPFGF

Sequences:

>Translated_207_residues
MAQFFVIHPENPQARLIREAVKILREGGVIAYPTDSCYALGCALGDKEAMERILEIRGVDLKQRLMTLVCHDLSELANYA
KVDNRQYRLLKSTTPGSYTFILQATREVPRRTLHPKRATIGLRVPDHKVALALLEELGEPILSCTLMLPGDDVPMSDPYE
IRERLEHLVDAVLDGGWCGTEPTTVVDMTDGVELVREGKGALAPFGF
>Mature_206_residues
AQFFVIHPENPQARLIREAVKILREGGVIAYPTDSCYALGCALGDKEAMERILEIRGVDLKQRLMTLVCHDLSELANYAK
VDNRQYRLLKSTTPGSYTFILQATREVPRRTLHPKRATIGLRVPDHKVALALLEELGEPILSCTLMLPGDDVPMSDPYEI
RERLEHLVDAVLDGGWCGTEPTTVVDMTDGVELVREGKGALAPFGF

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=206, Percent_Identity=58.7378640776699, Blast_Score=246, Evalue=8e-67,
Organism=Escherichia coli, GI2367210, Length=144, Percent_Identity=29.8611111111111, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI78707274, Length=186, Percent_Identity=30.1075268817204, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 23029; Mature: 22898

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFFVIHPENPQARLIREAVKILREGGVIAYPTDSCYALGCALGDKEAMERILEIRGVD
CCEEEEEECCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEHCCCCCHHHHHHHHHHCCCC
LKQRLMTLVCHDLSELANYAKVDNRQYRLLKSTTPGSYTFILQATREVPRRTLHPKRATI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCEE
GLRVPDHKVALALLEELGEPILSCTLMLPGDDVPMSDPYEIRERLEHLVDAVLDGGWCGT
EEECCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
EPTTVVDMTDGVELVREGKGALAPFGF
CCCEEEECCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AQFFVIHPENPQARLIREAVKILREGGVIAYPTDSCYALGCALGDKEAMERILEIRGVD
CEEEEEECCCCHHHHHHHHHHHHHHCCEEEECCCCCEEEHCCCCCHHHHHHHHHHCCCC
LKQRLMTLVCHDLSELANYAKVDNRQYRLLKSTTPGSYTFILQATREVPRRTLHPKRATI
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCEE
GLRVPDHKVALALLEELGEPILSCTLMLPGDDVPMSDPYEIRERLEHLVDAVLDGGWCGT
EEECCCHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
EPTTVVDMTDGVELVREGKGALAPFGF
CCCEEEECCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]