Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is yaiW [H]

Identifier: 34497127

GI number: 34497127

Start: 1811673

End: 1812956

Strand: Direct

Name: yaiW [H]

Synonym: CV_1672

Alternate gene names: 34497127

Gene position: 1811673-1812956 (Clockwise)

Preceding gene: 34497126

Following gene: 34497128

Centisome position: 38.13

GC content: 68.22

Gene sequence:

>1284_bases
ATGGGCCCGCGCTGGGCTACACTGCCGTTTTTGCCAGTCTGCGAGAACACCTTGAACGCCCGTCTGACCCTGCTGGCAGG
CTGCCTGCTGCTGGCCGCCTGCGCCACGCCCCCCCATCCCGCCTCCGCGCCTGCGCCCATCGTCGCGCCGGATATGCCGG
CCTCCGCGCCGGCAGTCGACGTGTTTGCATCCTCCCAGCCGGCTTCTGCGCCGGCCGCCGCGCTGCCGTCGCGTCCGGTC
GCGCGGCCGGTGCAGCCGCCGACGGCGATCTCCGAAAGCCAGGGCCGCGCCTTGCTGGACCGCCTGCTGCCGCCAGGCAT
TCCGGACCGCAAGGGCTGGAGCAACGACGTGATGGGCGCGTTCAGCCACCTGAAGATTCCGTACACGCCGCAGTTCTTCT
GCGCGGTGCTGGCGGTGGCGGAGCAGGAGTCCGGCTTCAGCCCGGACCCGGTGGTGCCGAATCTGTCCAAGATCGTCTGG
GGCGAGATCGAGCAGCGCCGGCAGAAGTACCTGATCCCGCAGTTCGTCGTCGATGCGGCGATGGGCAAGAAATCCCCCGA
CGGCCGCACTTTCAAGCAGCGCGTCGACGCCCTGCGCACCAAGCGCGAGATGAACGCCTTGTACGAAGACATGGTTCGCG
AGCTGCCGTTCGGCCAGACCATCTTCGAACACAAGAACCCTATCCGCGACGGCGGGCCGATGCAGGTCAGCGTCGCTTTC
GCCGAGACCCACATCCGCGCCTGGCCGTACCCGTACAATTATTCCAGCCTGCGCGACGAAGTGTTCGGCCGCCGCGGCAG
CGTCTACTTCGGCACCGCCATCCTGCTGCAGTACCCGGCGCCGTATCACGAGATGGTCTACCGCTTCGCCGACTACAACG
CCGGCCGCTACGCCAGCCGCAACGCCGCCTTCCAGCTGGCGGTGTCCCGGCTGTCCGGCCGCAAGCTGGCGCTGGACGGC
GACATCATGCTGTACAGCGACAAGATGAACCGCGTGCTGTCCGGCGAAACCAGCGACACCCAGCGCGCGCTGCAATCCAT
CGCCGGCCGGCTGGGCATCAGCGACGCCGACATGATGCGCGACCTGCGGCTGGAGAAGCTGTCCGGCTTCGGCCAGAGCC
CGCTGTATCAGAAGGTGTTCGCGTTGGCCGGTCCCAAGGCCCCGCGGGAGATCATCCCGCAGATCGTGCTGGTCAGCCCC
AAGTTCACCCACAAGCTGACCACCGAGTGGTTCGCGCGCCGCGTCGACGGCCGCTACCAGCGCTGCCTGCAGCGCGGAGG
CTGA

Upstream 100 bases:

>100_bases
GGACGACGCGCTGATCGCCCGGCTGGATGGCGCCATCGCCGCGATGCGCGCCGACGGCAGCATGGCCCGTTTCGATCTGC
GCTGACGGCGGGCATGCCAA

Downstream 100 bases:

>100_bases
GCGGCCCGCCGGCTTGAGTCTGGACCGATAGCACCTATAGTGATTGCAGCGGCGCCTGGGCGCCGACACGCATCCGGACG
GCGGCCATTCCATGGTCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MGPRWATLPFLPVCENTLNARLTLLAGCLLLAACATPPHPASAPAPIVAPDMPASAPAVDVFASSQPASAPAAALPSRPV
ARPVQPPTAISESQGRALLDRLLPPGIPDRKGWSNDVMGAFSHLKIPYTPQFFCAVLAVAEQESGFSPDPVVPNLSKIVW
GEIEQRRQKYLIPQFVVDAAMGKKSPDGRTFKQRVDALRTKREMNALYEDMVRELPFGQTIFEHKNPIRDGGPMQVSVAF
AETHIRAWPYPYNYSSLRDEVFGRRGSVYFGTAILLQYPAPYHEMVYRFADYNAGRYASRNAAFQLAVSRLSGRKLALDG
DIMLYSDKMNRVLSGETSDTQRALQSIAGRLGISDADMMRDLRLEKLSGFGQSPLYQKVFALAGPKAPREIIPQIVLVSP
KFTHKLTTEWFARRVDGRYQRCLQRGG

Sequences:

>Translated_427_residues
MGPRWATLPFLPVCENTLNARLTLLAGCLLLAACATPPHPASAPAPIVAPDMPASAPAVDVFASSQPASAPAAALPSRPV
ARPVQPPTAISESQGRALLDRLLPPGIPDRKGWSNDVMGAFSHLKIPYTPQFFCAVLAVAEQESGFSPDPVVPNLSKIVW
GEIEQRRQKYLIPQFVVDAAMGKKSPDGRTFKQRVDALRTKREMNALYEDMVRELPFGQTIFEHKNPIRDGGPMQVSVAF
AETHIRAWPYPYNYSSLRDEVFGRRGSVYFGTAILLQYPAPYHEMVYRFADYNAGRYASRNAAFQLAVSRLSGRKLALDG
DIMLYSDKMNRVLSGETSDTQRALQSIAGRLGISDADMMRDLRLEKLSGFGQSPLYQKVFALAGPKAPREIIPQIVLVSP
KFTHKLTTEWFARRVDGRYQRCLQRGG
>Mature_426_residues
GPRWATLPFLPVCENTLNARLTLLAGCLLLAACATPPHPASAPAPIVAPDMPASAPAVDVFASSQPASAPAAALPSRPVA
RPVQPPTAISESQGRALLDRLLPPGIPDRKGWSNDVMGAFSHLKIPYTPQFFCAVLAVAEQESGFSPDPVVPNLSKIVWG
EIEQRRQKYLIPQFVVDAAMGKKSPDGRTFKQRVDALRTKREMNALYEDMVRELPFGQTIFEHKNPIRDGGPMQVSVAFA
ETHIRAWPYPYNYSSLRDEVFGRRGSVYFGTAILLQYPAPYHEMVYRFADYNAGRYASRNAAFQLAVSRLSGRKLALDGD
IMLYSDKMNRVLSGETSDTQRALQSIAGRLGISDADMMRDLRLEKLSGFGQSPLYQKVFALAGPKAPREIIPQIVLVSPK
FTHKLTTEWFARRVDGRYQRCLQRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786576, Length=333, Percent_Identity=45.3453453453453, Blast_Score=311, Evalue=4e-86,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011673
- ProDom:   PD041438 [H]

Pfam domain/function: PF07759 DUF1615 [H]

EC number: NA

Molecular weight: Translated: 47174; Mature: 47043

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPRWATLPFLPVCENTLNARLTLLAGCLLLAACATPPHPASAPAPIVAPDMPASAPAVD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
VFASSQPASAPAAALPSRPVARPVQPPTAISESQGRALLDRLLPPGIPDRKGWSNDVMGA
EEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH
FSHLKIPYTPQFFCAVLAVAEQESGFSPDPVVPNLSKIVWGEIEQRRQKYLIPQFVVDAA
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
MGKKSPDGRTFKQRVDALRTKREMNALYEDMVRELPFGQTIFEHKNPIRDGGPMQVSVAF
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEE
AETHIRAWPYPYNYSSLRDEVFGRRGSVYFGTAILLQYPAPYHEMVYRFADYNAGRYASR
EHHHHEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCC
NAAFQLAVSRLSGRKLALDGDIMLYSDKMNRVLSGETSDTQRALQSIAGRLGISDADMMR
CHHHHHHHHHHCCCEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH
DLRLEKLSGFGQSPLYQKVFALAGPKAPREIIPQIVLVSPKFTHKLTTEWFARRVDGRYQ
HHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHCHHHH
RCLQRGG
HHHHCCC
>Mature Secondary Structure 
GPRWATLPFLPVCENTLNARLTLLAGCLLLAACATPPHPASAPAPIVAPDMPASAPAVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
VFASSQPASAPAAALPSRPVARPVQPPTAISESQGRALLDRLLPPGIPDRKGWSNDVMGA
EEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH
FSHLKIPYTPQFFCAVLAVAEQESGFSPDPVVPNLSKIVWGEIEQRRQKYLIPQFVVDAA
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
MGKKSPDGRTFKQRVDALRTKREMNALYEDMVRELPFGQTIFEHKNPIRDGGPMQVSVAF
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEE
AETHIRAWPYPYNYSSLRDEVFGRRGSVYFGTAILLQYPAPYHEMVYRFADYNAGRYASR
EHHHHEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCC
NAAFQLAVSRLSGRKLALDGDIMLYSDKMNRVLSGETSDTQRALQSIAGRLGISDADMMR
CHHHHHHHHHHCCCEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHH
DLRLEKLSGFGQSPLYQKVFALAGPKAPREIIPQIVLVSPKFTHKLTTEWFARRVDGRYQ
HHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHCHHHH
RCLQRGG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]