| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497123
Identifier: 34497123
GI number: 34497123
Start: 1808340
End: 1808906
Strand: Reverse
Name: 34497123
Synonym: CV_1668
Alternate gene names: NA
Gene position: 1808906-1808340 (Counterclockwise)
Preceding gene: 34497124
Following gene: 34497122
Centisome position: 38.07
GC content: 60.32
Gene sequence:
>567_bases TTGCAAATGCAACATAAGCGCTACTCATTATCACTAGAATCATCTGCGCAACAAAACAATGTCATTAAAACTGCAAAGGT TATGAAAATGAAGAAACTTGTTTTGACCGCCTGCCTGCTGGGCGCTTCCTTCGCGGCGCTGGCCGACGCCAAATCCGACT GCCGCGCCGCCGCCGGCAGCTACCTGACCGGCACCGTGGTCAGCGGACCGACCTTCGCCTCCGGCCAGATGCTGAACGGC GTCGAGCTGTCGCACACCCACGTGCGCCTGCGCGCCGACCAGGACGGCCGCACCTATGATGTGGCGATGGACAATGTGTA CGCCTACGGCTACGACTACGCCGGCGAAGACGTGCCCTCCCCGCTGAACACCATCCAACGGGGCGACCGCCTGCAATTGT GCGGCCAGTTATACACCAGCGGCGTCGGCATCCACTGGGTGCACCCCAACTGCGGCGCGCAGCCGACCAGCCGCCAACCG AACGGCTGGGTGAAGAAGATCTACAGCGACGGCACCGTCAGTGACAACTACGAAGCCAACACCGAATACTGCCAACTGTG GCAATAG
Upstream 100 bases:
>100_bases GGCGCCCCGCGCGAAATCAGGCAAACGGCGCGCCGCCACCCACCCATCGCAGCCATCTTCACACTTTATTCATCATTGAA AAACAAACACATCACTCTTA
Downstream 100 bases:
>100_bases GCCAGCTTCCGGCTGGGAAAAAACGCGCCTGCGGGCGCGTTTTCCTTTGCGGTGACAAACCGTCCACGAGCTGGCGGCGG CCAGGCGCTGCGCGCCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MQMQHKRYSLSLESSAQQNNVIKTAKVMKMKKLVLTACLLGASFAALADAKSDCRAAAGSYLTGTVVSGPTFASGQMLNG VELSHTHVRLRADQDGRTYDVAMDNVYAYGYDYAGEDVPSPLNTIQRGDRLQLCGQLYTSGVGIHWVHPNCGAQPTSRQP NGWVKKIYSDGTVSDNYEANTEYCQLWQ
Sequences:
>Translated_188_residues MQMQHKRYSLSLESSAQQNNVIKTAKVMKMKKLVLTACLLGASFAALADAKSDCRAAAGSYLTGTVVSGPTFASGQMLNG VELSHTHVRLRADQDGRTYDVAMDNVYAYGYDYAGEDVPSPLNTIQRGDRLQLCGQLYTSGVGIHWVHPNCGAQPTSRQP NGWVKKIYSDGTVSDNYEANTEYCQLWQ >Mature_188_residues MQMQHKRYSLSLESSAQQNNVIKTAKVMKMKKLVLTACLLGASFAALADAKSDCRAAAGSYLTGTVVSGPTFASGQMLNG VELSHTHVRLRADQDGRTYDVAMDNVYAYGYDYAGEDVPSPLNTIQRGDRLQLCGQLYTSGVGIHWVHPNCGAQPTSRQP NGWVKKIYSDGTVSDNYEANTEYCQLWQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20607; Mature: 20607
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMQHKRYSLSLESSAQQNNVIKTAKVMKMKKLVLTACLLGASFAALADAKSDCRAAAGS CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC YLTGTVVSGPTFASGQMLNGVELSHTHVRLRADQDGRTYDVAMDNVYAYGYDYAGEDVPS CEEEEEECCCCCCCCCEECCEEECCEEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCC PLNTIQRGDRLQLCGQLYTSGVGIHWVHPNCGAQPTSRQPNGWVKKIYSDGTVSDNYEAN HHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC TEYCQLWQ CCEEEECC >Mature Secondary Structure MQMQHKRYSLSLESSAQQNNVIKTAKVMKMKKLVLTACLLGASFAALADAKSDCRAAAGS CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC YLTGTVVSGPTFASGQMLNGVELSHTHVRLRADQDGRTYDVAMDNVYAYGYDYAGEDVPS CEEEEEECCCCCCCCCEECCEEECCEEEEEEECCCCCEEEEEECCEEEECCCCCCCCCCC PLNTIQRGDRLQLCGQLYTSGVGIHWVHPNCGAQPTSRQPNGWVKKIYSDGTVSDNYEAN HHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCC TEYCQLWQ CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA