| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is gacS [H]
Identifier: 34497076
GI number: 34497076
Start: 1751569
End: 1756815
Strand: Direct
Name: gacS [H]
Synonym: CV_1621
Alternate gene names: 34497076
Gene position: 1751569-1756815 (Clockwise)
Preceding gene: 34497075
Following gene: 34497078
Centisome position: 36.87
GC content: 67.71
Gene sequence:
>5247_bases TTGAGTGAACATTGCGATTCGTCCGCCTGGATGAAAAAACCGCTATTGCCCGCGTCGGCCACCGCGCTGCTGGTTCTGCT GCTGGGCGCCGTCCTGAGCCTGTCGCTGGGCTGGAAAGTCTCTCGCGACAACCGCGAACGCGTCGATGCCGAGCTGCGGC GCGAGGCGCGGCAACTGGGCGTGGAGGTGGCCGCCCGCATCCGGCGCTACCAAAATGGCTTGGGCGGCGCGCGGGGCGCG ATCGCCAGCAACGGCGAGCACGGCATCAACCGCCAGCGTTTCCGGGTCTATACCCAGAGCTTGAACGCTGCGGTCGAATT CCCCGGCTTGCTTGGATTCGGCTATGCGCGCAGGGTGCCGCCGCAGCGGGTGGCGGAATTCGTGCGACAGGAGCGCCGGG ATGGCGAGCCTGGCTTCTCCATTCGCCAGCTGCGTCCGCATGAGGGCGAGCGCGCGGTCATCGTCTATTTCGAGCCGGAA CCGGGCAATCGTTTCGTCATCGGAGTCGATATCGCGTCCGAGCCCAGCAGGCGGGCGGCGGCAGAGGCCGCGCTGCGCAG CGGGCAAGCCCGGCTGAGCGAACCCATCGCCCTGATGCCGCATCCGGAAGACAAGGCGCAAGCCTTTCTGCTGTTGTTGC CGGTGTACGCCGGCGGCGCGACGCCGGCCAGCGAGGAGGGCAGGCTGCGGGCGGGCTTCGGCTGGGTTTTCGCGCCCATC CGGGCGCAGGATGCGATGGCGGGGCTGATGGCCGACCTCCCGGGCGTCGCCGTGGAATTGGCCGACGTGACGGACGGCAG GAAGGCGGTTTTCTTTCAGGGCGGGTCGAATCCGGCCCAGCCCATCGCCGCGGCCTCGGAGCTGCAGCCGCTGTTCGGCC GGGACTGGAGGCTGTCCTTGCGCGCCGGACCGGCCTTCGCCGACAGCCTGAAGCTGCCAAGCGCCGCGCTGGTGGCGTCG TCAGGCTTGGCGGCGAGCGTCCTGTCCGCTCTGCTGGCGCTGGTGGTGGGGCGCAATCGCCAGCGGCGGCGAGAGCTGCT GGCGGCGCAGAGCCGGCTGGCGGCCATCGTCGAGGGCTCGGTGGACGCCATCATCAGCAAGACCCTGGACGGCGTGGTCA CCAGCTGGAATCTCAGCGCGGAGCGGCTGTTCGGCTATCGGGCCGACGAGGCTGTGGGGCAGCCGCTGGCGAAGCTGATC GTGCCGGAGGACAGGCGCGGAGAGGAGGTGGACATCCTGCGCCGGATCGCCCGCGGCGAGCGCATAGAGCACTTCGAAAC GGTACGCATGCGCAAGGACGGGAGCTTGCTGATCGTGTCGGTATCGATCTCGCCGGTGCTGGACGAGGCCGGGCGGGTGG TGGGCGCGTCCAAGGTGCTGAGGGACCTCAGCGAGCAGAAGCGGATCAAGGCCGAACTGCAGGTGCTGAGCGAAAATCTC GAGCAAAGGGTGGCCGACCGCACGGCGGAACTGGATCAGGCCTGGCGCACGCTGCAGACGGTGCTGGACGCCGTGCCGTT CATCATCGGCTATTGGGATTGCGACCAGATCAATCGCGTGGCCAATCACGCGTACCGTACCTGGTTCGGCATCGATCCAG GGGCCTTGCCGGGCATGCGGATGCGCGATTTGCTGGGAGAGCCGCTCTACCAGGCCAACCTGCCGCATATCGAGGCGGTG CTTGGCGGCGAACCTCAGGTTTTCGAGCGGCAGATTTGCGGACAGGACGGCGTGGTGCGCCATTCGCTGACGACGTATCT GCCCGACCTCGTCAACGACGAGGTCCGGGGCTTCTACGCCATCGTCCAGGACATTTCCGAGCAAGTGGAGAGCCGCAGCC GGCTGACTTCGGCGCTGAAGGAGCGCGAGTTGCTGCTGGACACTATCAACCAGCAGCTGCTGTACACCGCCACCGATACC GACGGACGGATACTGGAGGCCAACGATCTGTTCTGCCAGGTTCACGGCTACGAGCGCAAGGAATTGCTGGGCTGGGATCA CCGCAAATTGAGCGCTGGCGTCCATCCGGCGATGTTCTGGCAGTCGCTGTGGCGCACCATAGCCTCGGGCCGCGTGTGGC GCGGCGAGGTCTGCAACCAGACCCGGGAGGGCAGGCAGCGTTGGTTCGACACCGTGATCGTGCCCCATGCCGGGGACAGC GGCCGCATCGAGCGCTATATCGCGCTGCGCATCGACATCACTGAGCGGAAGTTGGCCGACGCCGAGCTCGCCCGCGTGCA TGGCATGTTGAGCAATGTGCTGCGCGCGGCGTCGGAAGTGGCCATCATCGCCGCCGACGTCCATGGCGTGGTTTCGCTGT TCAACAGCGGCGCGCAGCGCATGCTCGGCTACAGCGAGAACGAGATGGTGGGGCGGGCGATGCTGACCCATTTCCATCTG CCGGAGGAGTTGCGCGAGCATGGCGAGGCCTTGAGCCAGCGTTATGAGCGCCAGGTGGAGGGGTTGCGCGCGCTGGTGCA GGAGCCCGAGGCCAGCGGAGCCGAGACGCGGGAATGGACCTATGTCCGCAAGGACGGCTCCCAGCTTCAGGTATCGCTGA TGGTGACCGCGATGCGGGACGCCGACGAGCTGGTGGTCGGCTACCTGGCCATCGCCGCCGACATCACCATTCCGCAGCGG CAGCAGCGGGAGCTGGTGGCGGCCCGCGACCAGTTGCAGCTGGCTGCCGAAGTGGCCCAGCTTGGAGTGTGGAGCTGGTC GCCGGCGGACAACCAGCTGCGCTGGAACGCGCAGATGTTCGAAATCTACCGCCAGCCGCCGGAACTGGCAGAGCGGGGGC TGGAGTACCGGCACTGGCGCGAGCGGGTGCATCCGGACGATGTGGACAGCGTGGAGGCCGACCTGCGCGCGCTGCTGGAG CGCGGCGAGGCGATGGACAGGGTGTTCCGGGTGCGGCTGCCGGACGGAGAGATGCGCTACGTGCAGGTCGGCGCGCGTCT GGAGCGCCACGGCGACGGCGTGCGGGTGACGGGCATCAACCGCGACATCACCGAAACCCGCGCCTACGAGCAGAATCTGC TGGAAGCGAAGCGCCAGGCCGAAGAAGCCAGCATGGTGAAGAGCCAGTTCCTGGCCAATATGAGCCACGAGATCCGCACG CCGATGAACGCGGTGCTGGGGCTGCTGCAACTGATGCAGCATACCCGGCTGGACGAGCGCCAGCTCGATTACGTGGGCAA GATCCAGGCGGCGGCCAAGTCGCTGCTGGGCCTGCTCAACGACATCCTAGACTTTTCCAAGATCGACGCCGGCAAGCTGC AGCTGGACCTGCACCCTTTCGATCTGGAGGGCCTGATGCGGGAGTTGGCGGTGGTGTTGTCCGGCAATACCAACGACAAG GACGTCGAGGTGCTGTTCCGCATGGAGCCGACGCTGCCCGCCATGCTGATCGGGGACAAGCTGAGGCTGCAGCAGATCCT GATCAACCTGGCCGGCAACGCGCTCAAATTCACCACGCAAGGCCAGGTCGTCCTCGCTGTCCGGGAACGGGCGCGCCGCG AAGGCGAGGTCGAGTTGCGCATCGAGGTCAGCGACACCGGCATCGGCATCGCGCCGGAGCAGCTGTCGCGCATTTTCGAA GGCTTCACCCAGGCCGAGGCCTCCACCACCCGGCGCTTCGGCGGCACCGGCCTGGGCCTGGTGATCAGCAGGCGGCTGGT GGAGCTGATGGGAGGGCAGCTCAGGGTGGAGAGCCAGCTCGGCTGCGGCAGCCGTTTCTGGTTCGACCTGACCCTGGGCA TGGCGGCGGATCAGCCGCTGGCGCAACTGCCCGAGCCGCTGGGACAACTGAACGTCCTGGTGGTGGATGACAATCCGCTG GCGGGCGAGATACTGATGGATACCATCTCGACCGTCGGCTGGCGCGCCGAATATGCCGATGGGGGCGAGGAGGCGCTGGA GAAAGTGCACGGGGCGGGTTCCGCCGGCCAGCGTTACGACGTGGTGCTGATGGACTGGCGCATGCCCGGCCTGGACGGCG TGGGCGTCGCCGAAGTGATGCGGCAGCAACTGGCGGGCGACAAGCCGCCGGTGATCATCATGGTGACGGCTTTCGGCCGC GAGGTGCTGGCCGAGGCGGCCGAGCGGCCGAACCCGCCGTTCAACGATTTCCTGACCAAGCCGATTACCCCGCAGCAACT GGTGGACGCCGTGGTCCGCTCGGTGACGGGAGAGGGCGAGGCGGAAAGGACGCCTGCGACTACGGCGTTCGGCCGTCGCC TGGACGGCATGAGCGTCCTGCTGGTGGAGGACAACGCCCTCAATCGCCAGGTGGCGTCCGAGTTGCTGCAGGAGGAGGGC GCGAGAGTCAGCCTGGCCGAGGGGGGACTGTCGGGGGTGTCCCAGGCGGTGTCGGCCGACCCGGCGTTCGACATCGTGAT CATGGACGTGCAGATGCCGGACATCGATGGATTGGAAGCCACCCGCCGCATCCGCGCCGACATGCGCTGCCAGCGGCTGC CGATTCTGGCGATGACGGCCAATGCGTCCCAGGCCGATCGCGCGGCCTGCCTGGCGGCGGGAATGAACGACCACGTCGGC AAGCCGATAGACATCGACGAACTGGTGCCCAAGCTGCTGGCGTTGGCGGGGCGCGAAGGCGGTCCGGACGGGACGGCGGC GAGCGTTCCGGCGCCGAGGGCCGACGATTCCGGCGCGCTGGTCGAATCGCTGCCTTCGCGGTTGCGCCGTTTCGGCAACA AGCTGCGGGTCTATCGCGCCGCGTTGGCCACCTTCCGTCCGGAATGCGAGACGCTGCTGTCCGGCATCGCAGAGAGCGGC CGCCTGGATGCGCGGCCGGAGCTGGCGTCGGGCTTGCATACCCTGAAGGGGCTGGCGGCGACGCTGGGCGCGCAGGCGCT GAGCCGGCTGGCCGCCGAGCTCGAAAAGCGCGCGCGGGACGGGGAGGCGATAAGCGGCGAGGATCTCGAGCGTTTGCGCG GGCTGCTGGGCGACAGCGTGGCGCAGCTGTTCGACAGCCTGCCGGCGGAAGAGACGGGCAAGACGGCGAAACCGCTTCCG GACGGGGATTGGAGGAGGCAGCTGCGCGACATCCTGGCCTTGCTGGAGGACAGCAATCTGGCGGCGATAGACCTGGTTGA CGAATTGCTGGACCGGCCGCTGGGCGCTCAGGAGGACTCGGTGCGCGAAGTGGCGGCCTGCGTGCAACGGCTGCAGTTCG AGCAGGCGATCGCCATCGTCCGGGAGCTGCTGGCATTGGCGGACTGA
Upstream 100 bases:
>100_bases GCCGAAATCGACAGGCGTTTCGCCTGACGGCGTTCTTCCCGAGATCCGGACCGGCCAGACCGGTCCGGTCGCGTTTTGAC GATGAAGCTGGGGGCATGCC
Downstream 100 bases:
>100_bases GCAGGCCGGACCGAGGCCGGCCTGCGGGCGGCAGGCGTCAGCCGGCCGAGCGCCGCAGCAGCACCGGCACCGACTTGGAC GTGGGCGTGTTGGAGACGCC
Product: sensor/response regulatory hybrid protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1748; Mature: 1747
Protein sequence:
>1748_residues MSEHCDSSAWMKKPLLPASATALLVLLLGAVLSLSLGWKVSRDNRERVDAELRREARQLGVEVAARIRRYQNGLGGARGA IASNGEHGINRQRFRVYTQSLNAAVEFPGLLGFGYARRVPPQRVAEFVRQERRDGEPGFSIRQLRPHEGERAVIVYFEPE PGNRFVIGVDIASEPSRRAAAEAALRSGQARLSEPIALMPHPEDKAQAFLLLLPVYAGGATPASEEGRLRAGFGWVFAPI RAQDAMAGLMADLPGVAVELADVTDGRKAVFFQGGSNPAQPIAAASELQPLFGRDWRLSLRAGPAFADSLKLPSAALVAS SGLAASVLSALLALVVGRNRQRRRELLAAQSRLAAIVEGSVDAIISKTLDGVVTSWNLSAERLFGYRADEAVGQPLAKLI VPEDRRGEEVDILRRIARGERIEHFETVRMRKDGSLLIVSVSISPVLDEAGRVVGASKVLRDLSEQKRIKAELQVLSENL EQRVADRTAELDQAWRTLQTVLDAVPFIIGYWDCDQINRVANHAYRTWFGIDPGALPGMRMRDLLGEPLYQANLPHIEAV LGGEPQVFERQICGQDGVVRHSLTTYLPDLVNDEVRGFYAIVQDISEQVESRSRLTSALKERELLLDTINQQLLYTATDT DGRILEANDLFCQVHGYERKELLGWDHRKLSAGVHPAMFWQSLWRTIASGRVWRGEVCNQTREGRQRWFDTVIVPHAGDS GRIERYIALRIDITERKLADAELARVHGMLSNVLRAASEVAIIAADVHGVVSLFNSGAQRMLGYSENEMVGRAMLTHFHL PEELREHGEALSQRYERQVEGLRALVQEPEASGAETREWTYVRKDGSQLQVSLMVTAMRDADELVVGYLAIAADITIPQR QQRELVAARDQLQLAAEVAQLGVWSWSPADNQLRWNAQMFEIYRQPPELAERGLEYRHWRERVHPDDVDSVEADLRALLE RGEAMDRVFRVRLPDGEMRYVQVGARLERHGDGVRVTGINRDITETRAYEQNLLEAKRQAEEASMVKSQFLANMSHEIRT PMNAVLGLLQLMQHTRLDERQLDYVGKIQAAAKSLLGLLNDILDFSKIDAGKLQLDLHPFDLEGLMRELAVVLSGNTNDK DVEVLFRMEPTLPAMLIGDKLRLQQILINLAGNALKFTTQGQVVLAVRERARREGEVELRIEVSDTGIGIAPEQLSRIFE GFTQAEASTTRRFGGTGLGLVISRRLVELMGGQLRVESQLGCGSRFWFDLTLGMAADQPLAQLPEPLGQLNVLVVDDNPL AGEILMDTISTVGWRAEYADGGEEALEKVHGAGSAGQRYDVVLMDWRMPGLDGVGVAEVMRQQLAGDKPPVIIMVTAFGR EVLAEAAERPNPPFNDFLTKPITPQQLVDAVVRSVTGEGEAERTPATTAFGRRLDGMSVLLVEDNALNRQVASELLQEEG ARVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIRADMRCQRLPILAMTANASQADRAACLAAGMNDHVG KPIDIDELVPKLLALAGREGGPDGTAASVPAPRADDSGALVESLPSRLRRFGNKLRVYRAALATFRPECETLLSGIAESG RLDARPELASGLHTLKGLAATLGAQALSRLAAELEKRARDGEAISGEDLERLRGLLGDSVAQLFDSLPAEETGKTAKPLP DGDWRRQLRDILALLEDSNLAAIDLVDELLDRPLGAQEDSVREVAACVQRLQFEQAIAIVRELLALAD
Sequences:
>Translated_1748_residues MSEHCDSSAWMKKPLLPASATALLVLLLGAVLSLSLGWKVSRDNRERVDAELRREARQLGVEVAARIRRYQNGLGGARGA IASNGEHGINRQRFRVYTQSLNAAVEFPGLLGFGYARRVPPQRVAEFVRQERRDGEPGFSIRQLRPHEGERAVIVYFEPE PGNRFVIGVDIASEPSRRAAAEAALRSGQARLSEPIALMPHPEDKAQAFLLLLPVYAGGATPASEEGRLRAGFGWVFAPI RAQDAMAGLMADLPGVAVELADVTDGRKAVFFQGGSNPAQPIAAASELQPLFGRDWRLSLRAGPAFADSLKLPSAALVAS SGLAASVLSALLALVVGRNRQRRRELLAAQSRLAAIVEGSVDAIISKTLDGVVTSWNLSAERLFGYRADEAVGQPLAKLI VPEDRRGEEVDILRRIARGERIEHFETVRMRKDGSLLIVSVSISPVLDEAGRVVGASKVLRDLSEQKRIKAELQVLSENL EQRVADRTAELDQAWRTLQTVLDAVPFIIGYWDCDQINRVANHAYRTWFGIDPGALPGMRMRDLLGEPLYQANLPHIEAV LGGEPQVFERQICGQDGVVRHSLTTYLPDLVNDEVRGFYAIVQDISEQVESRSRLTSALKERELLLDTINQQLLYTATDT DGRILEANDLFCQVHGYERKELLGWDHRKLSAGVHPAMFWQSLWRTIASGRVWRGEVCNQTREGRQRWFDTVIVPHAGDS GRIERYIALRIDITERKLADAELARVHGMLSNVLRAASEVAIIAADVHGVVSLFNSGAQRMLGYSENEMVGRAMLTHFHL PEELREHGEALSQRYERQVEGLRALVQEPEASGAETREWTYVRKDGSQLQVSLMVTAMRDADELVVGYLAIAADITIPQR QQRELVAARDQLQLAAEVAQLGVWSWSPADNQLRWNAQMFEIYRQPPELAERGLEYRHWRERVHPDDVDSVEADLRALLE RGEAMDRVFRVRLPDGEMRYVQVGARLERHGDGVRVTGINRDITETRAYEQNLLEAKRQAEEASMVKSQFLANMSHEIRT PMNAVLGLLQLMQHTRLDERQLDYVGKIQAAAKSLLGLLNDILDFSKIDAGKLQLDLHPFDLEGLMRELAVVLSGNTNDK DVEVLFRMEPTLPAMLIGDKLRLQQILINLAGNALKFTTQGQVVLAVRERARREGEVELRIEVSDTGIGIAPEQLSRIFE GFTQAEASTTRRFGGTGLGLVISRRLVELMGGQLRVESQLGCGSRFWFDLTLGMAADQPLAQLPEPLGQLNVLVVDDNPL AGEILMDTISTVGWRAEYADGGEEALEKVHGAGSAGQRYDVVLMDWRMPGLDGVGVAEVMRQQLAGDKPPVIIMVTAFGR EVLAEAAERPNPPFNDFLTKPITPQQLVDAVVRSVTGEGEAERTPATTAFGRRLDGMSVLLVEDNALNRQVASELLQEEG ARVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIRADMRCQRLPILAMTANASQADRAACLAAGMNDHVG KPIDIDELVPKLLALAGREGGPDGTAASVPAPRADDSGALVESLPSRLRRFGNKLRVYRAALATFRPECETLLSGIAESG RLDARPELASGLHTLKGLAATLGAQALSRLAAELEKRARDGEAISGEDLERLRGLLGDSVAQLFDSLPAEETGKTAKPLP DGDWRRQLRDILALLEDSNLAAIDLVDELLDRPLGAQEDSVREVAACVQRLQFEQAIAIVRELLALAD >Mature_1747_residues SEHCDSSAWMKKPLLPASATALLVLLLGAVLSLSLGWKVSRDNRERVDAELRREARQLGVEVAARIRRYQNGLGGARGAI ASNGEHGINRQRFRVYTQSLNAAVEFPGLLGFGYARRVPPQRVAEFVRQERRDGEPGFSIRQLRPHEGERAVIVYFEPEP GNRFVIGVDIASEPSRRAAAEAALRSGQARLSEPIALMPHPEDKAQAFLLLLPVYAGGATPASEEGRLRAGFGWVFAPIR AQDAMAGLMADLPGVAVELADVTDGRKAVFFQGGSNPAQPIAAASELQPLFGRDWRLSLRAGPAFADSLKLPSAALVASS GLAASVLSALLALVVGRNRQRRRELLAAQSRLAAIVEGSVDAIISKTLDGVVTSWNLSAERLFGYRADEAVGQPLAKLIV PEDRRGEEVDILRRIARGERIEHFETVRMRKDGSLLIVSVSISPVLDEAGRVVGASKVLRDLSEQKRIKAELQVLSENLE QRVADRTAELDQAWRTLQTVLDAVPFIIGYWDCDQINRVANHAYRTWFGIDPGALPGMRMRDLLGEPLYQANLPHIEAVL GGEPQVFERQICGQDGVVRHSLTTYLPDLVNDEVRGFYAIVQDISEQVESRSRLTSALKERELLLDTINQQLLYTATDTD GRILEANDLFCQVHGYERKELLGWDHRKLSAGVHPAMFWQSLWRTIASGRVWRGEVCNQTREGRQRWFDTVIVPHAGDSG RIERYIALRIDITERKLADAELARVHGMLSNVLRAASEVAIIAADVHGVVSLFNSGAQRMLGYSENEMVGRAMLTHFHLP EELREHGEALSQRYERQVEGLRALVQEPEASGAETREWTYVRKDGSQLQVSLMVTAMRDADELVVGYLAIAADITIPQRQ QRELVAARDQLQLAAEVAQLGVWSWSPADNQLRWNAQMFEIYRQPPELAERGLEYRHWRERVHPDDVDSVEADLRALLER GEAMDRVFRVRLPDGEMRYVQVGARLERHGDGVRVTGINRDITETRAYEQNLLEAKRQAEEASMVKSQFLANMSHEIRTP MNAVLGLLQLMQHTRLDERQLDYVGKIQAAAKSLLGLLNDILDFSKIDAGKLQLDLHPFDLEGLMRELAVVLSGNTNDKD VEVLFRMEPTLPAMLIGDKLRLQQILINLAGNALKFTTQGQVVLAVRERARREGEVELRIEVSDTGIGIAPEQLSRIFEG FTQAEASTTRRFGGTGLGLVISRRLVELMGGQLRVESQLGCGSRFWFDLTLGMAADQPLAQLPEPLGQLNVLVVDDNPLA GEILMDTISTVGWRAEYADGGEEALEKVHGAGSAGQRYDVVLMDWRMPGLDGVGVAEVMRQQLAGDKPPVIIMVTAFGRE VLAEAAERPNPPFNDFLTKPITPQQLVDAVVRSVTGEGEAERTPATTAFGRRLDGMSVLLVEDNALNRQVASELLQEEGA RVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIRADMRCQRLPILAMTANASQADRAACLAAGMNDHVGK PIDIDELVPKLLALAGREGGPDGTAASVPAPRADDSGALVESLPSRLRRFGNKLRVYRAALATFRPECETLLSGIAESGR LDARPELASGLHTLKGLAATLGAQALSRLAAELEKRARDGEAISGEDLERLRGLLGDSVAQLFDSLPAEETGKTAKPLPD GDWRRQLRDILALLEDSNLAAIDLVDELLDRPLGAQEDSVREVAACVQRLQFEQAIAIVRELLALAD
Specific function: Forms part of a two-component regulatory system gacA/gacS(lemA). May be involved in lesion formation, swarming and in the production of extracellular protease, syringomycin and N- acyl-L-homoserine lactone (acyl-HSL). Required for pathogenicity on bean [H
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=644, Percent_Identity=32.7639751552795, Blast_Score=293, Evalue=5e-80, Organism=Escherichia coli, GI48994928, Length=494, Percent_Identity=33.1983805668016, Blast_Score=208, Evalue=2e-54, Organism=Escherichia coli, GI145693157, Length=537, Percent_Identity=30.1675977653631, Blast_Score=207, Evalue=5e-54, Organism=Escherichia coli, GI87081816, Length=377, Percent_Identity=34.2175066312997, Blast_Score=192, Evalue=2e-49, Organism=Escherichia coli, GI1788713, Length=364, Percent_Identity=32.1428571428571, Blast_Score=174, Evalue=6e-44, Organism=Escherichia coli, GI1788393, Length=246, Percent_Identity=28.4552845528455, Blast_Score=91, Evalue=4e-19, Organism=Escherichia coli, GI1786600, Length=237, Percent_Identity=29.535864978903, Blast_Score=91, Evalue=5e-19, Organism=Escherichia coli, GI1788381, Length=245, Percent_Identity=26.530612244898, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=1e-17, Organism=Escherichia coli, GI1788549, Length=270, Percent_Identity=24.0740740740741, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI1787375, Length=139, Percent_Identity=37.410071942446, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1787894, Length=277, Percent_Identity=26.3537906137184, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786912, Length=239, Percent_Identity=26.7782426778243, Blast_Score=70, Evalue=1e-12, Organism=Escherichia coli, GI1786783, Length=231, Percent_Identity=25.974025974026, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1786784, Length=122, Percent_Identity=31.9672131147541, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1786911, Length=145, Percent_Identity=31.0344827586207, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1790346, Length=245, Percent_Identity=27.3469387755102, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1788279, Length=208, Percent_Identity=28.3653846153846, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=89, Percent_Identity=40.4494382022472, Blast_Score=80, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322000, Length=113, Percent_Identity=38.9380530973451, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 192343; Mature: 192212
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS50839 CHASE ; PS50894 HPT ; PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHCDSSAWMKKPLLPASATALLVLLLGAVLSLSLGWKVSRDNRERVDAELRREARQLG CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH VEVAARIRRYQNGLGGARGAIASNGEHGINRQRFRVYTQSLNAAVEFPGLLGFGYARRVP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHCCC PQRVAEFVRQERRDGEPGFSIRQLRPHEGERAVIVYFEPEPGNRFVIGVDIASEPSRRAA HHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHH AEAALRSGQARLSEPIALMPHPEDKAQAFLLLLPVYAGGATPASEEGRLRAGFGWVFAPI HHHHHHCCHHHHCCCEEECCCCCHHHHEEHHEEEHHCCCCCCCCCCCCEEECCCEEEECH RAQDAMAGLMADLPGVAVELADVTDGRKAVFFQGGSNPAQPIAAASELQPLFGRDWRLSL HHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHCCHHHCCCEEEEE RAGPAFADSLKLPSAALVASSGLAASVLSALLALVVGRNRQRRRELLAAQSRLAAIVEGS ECCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCH VDAIISKTLDGVVTSWNLSAERLFGYRADEAVGQPLAKLIVPEDRRGEEVDILRRIARGE HHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHHCCC RIEHFETVRMRKDGSLLIVSVSISPVLDEAGRVVGASKVLRDLSEQKRIKAELQVLSENL HHHHHHHHHEECCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRVADRTAELDQAWRTLQTVLDAVPFIIGYWDCDQINRVANHAYRTWFGIDPGALPGMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHEECCCCCCCCCHH MRDLLGEPLYQANLPHIEAVLGGEPQVFERQICGQDGVVRHSLTTYLPDLVNDEVRGFYA HHHHHCCCHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHH IVQDISEQVESRSRLTSALKERELLLDTINQQLLYTATDTDGRILEANDLFCQVHGYERK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEEECCCCHH ELLGWDHRKLSAGVHPAMFWQSLWRTIASGRVWRGEVCNQTREGRQRWFDTVIVPHAGDS HHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHEEEEECCCCC GRIERYIALRIDITERKLADAELARVHGMLSNVLRAASEVAIIAADVHGVVSLFNSGAQR CCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHH MLGYSENEMVGRAMLTHFHLPEELREHGEALSQRYERQVEGLRALVQEPEASGAETREWT HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE YVRKDGSQLQVSLMVTAMRDADELVVGYLAIAADITIPQRQQRELVAARDQLQLAAEVAQ EEECCCCEEEEEEEEEHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LGVWSWSPADNQLRWNAQMFEIYRQPPELAERGLEYRHWRERVHPDDVDSVEADLRALLE HCCCCCCCCCCCEECHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHH RGEAMDRVFRVRLPDGEMRYVQVGARLERHGDGVRVTGINRDITETRAYEQNLLEAKRQA HCHHHHHHEEEECCCCCEEEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH EEASMVKSQFLANMSHEIRTPMNAVLGLLQLMQHTRLDERQLDYVGKIQAAAKSLLGLLN HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH DILDFSKIDAGKLQLDLHPFDLEGLMRELAVVLSGNTNDKDVEVLFRMEPTLPAMLIGDK HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHCCH LRLQQILINLAGNALKFTTQGQVVLAVRERARREGEVELRIEVSDTGIGIAPEQLSRIFE HHHHHHHHHHCCCEEEEECCCCEEEHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHH GFTQAEASTTRRFGGTGLGLVISRRLVELMGGQLRVESQLGCGSRFWFDLTLGMAADQPL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCH AQLPEPLGQLNVLVVDDNPLAGEILMDTISTVGWRAEYADGGEEALEKVHGAGSAGQRYD HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEE VVLMDWRMPGLDGVGVAEVMRQQLAGDKPPVIIMVTAFGREVLAEAAERPNPPFNDFLTK EEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHCCC PITPQQLVDAVVRSVTGEGEAERTPATTAFGRRLDGMSVLLVEDNALNRQVASELLQEEG CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCC ARVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIRADMRCQRLPILAMTA CEEEECCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEC NASQADRAACLAAGMNDHVGKPIDIDELVPKLLALAGREGGPDGTAASVPAPRADDSGAL CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH VESLPSRLRRFGNKLRVYRAALATFRPECETLLSGIAESGRLDARPELASGLHTLKGLAA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TLGAQALSRLAAELEKRARDGEAISGEDLERLRGLLGDSVAQLFDSLPAEETGKTAKPLP HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DGDWRRQLRDILALLEDSNLAAIDLVDELLDRPLGAQEDSVREVAACVQRLQFEQAIAIV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RELLALAD HHHHHHCC >Mature Secondary Structure SEHCDSSAWMKKPLLPASATALLVLLLGAVLSLSLGWKVSRDNRERVDAELRREARQLG CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH VEVAARIRRYQNGLGGARGAIASNGEHGINRQRFRVYTQSLNAAVEFPGLLGFGYARRVP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCHHHCCC PQRVAEFVRQERRDGEPGFSIRQLRPHEGERAVIVYFEPEPGNRFVIGVDIASEPSRRAA HHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHH AEAALRSGQARLSEPIALMPHPEDKAQAFLLLLPVYAGGATPASEEGRLRAGFGWVFAPI HHHHHHCCHHHHCCCEEECCCCCHHHHEEHHEEEHHCCCCCCCCCCCCEEECCCEEEECH RAQDAMAGLMADLPGVAVELADVTDGRKAVFFQGGSNPAQPIAAASELQPLFGRDWRLSL HHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHCCHHHCCCEEEEE RAGPAFADSLKLPSAALVASSGLAASVLSALLALVVGRNRQRRRELLAAQSRLAAIVEGS ECCCCHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCH VDAIISKTLDGVVTSWNLSAERLFGYRADEAVGQPLAKLIVPEDRRGEEVDILRRIARGE HHHHHHHHHHHHHEECCCCHHHHHCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHHCCC RIEHFETVRMRKDGSLLIVSVSISPVLDEAGRVVGASKVLRDLSEQKRIKAELQVLSENL HHHHHHHHHEECCCCEEEEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQRVADRTAELDQAWRTLQTVLDAVPFIIGYWDCDQINRVANHAYRTWFGIDPGALPGMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHEECCCCCCCCCHH MRDLLGEPLYQANLPHIEAVLGGEPQVFERQICGQDGVVRHSLTTYLPDLVNDEVRGFYA HHHHHCCCHHHCCCCCCHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHH IVQDISEQVESRSRLTSALKERELLLDTINQQLLYTATDTDGRILEANDLFCQVHGYERK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCEEEECCCCHH ELLGWDHRKLSAGVHPAMFWQSLWRTIASGRVWRGEVCNQTREGRQRWFDTVIVPHAGDS HHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHEEEEECCCCC GRIERYIALRIDITERKLADAELARVHGMLSNVLRAASEVAIIAADVHGVVSLFNSGAQR CCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHH MLGYSENEMVGRAMLTHFHLPEELREHGEALSQRYERQVEGLRALVQEPEASGAETREWT HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE YVRKDGSQLQVSLMVTAMRDADELVVGYLAIAADITIPQRQQRELVAARDQLQLAAEVAQ EEECCCCEEEEEEEEEHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LGVWSWSPADNQLRWNAQMFEIYRQPPELAERGLEYRHWRERVHPDDVDSVEADLRALLE HCCCCCCCCCCCEECHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHH RGEAMDRVFRVRLPDGEMRYVQVGARLERHGDGVRVTGINRDITETRAYEQNLLEAKRQA HCHHHHHHEEEECCCCCEEEEEHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH EEASMVKSQFLANMSHEIRTPMNAVLGLLQLMQHTRLDERQLDYVGKIQAAAKSLLGLLN HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH DILDFSKIDAGKLQLDLHPFDLEGLMRELAVVLSGNTNDKDVEVLFRMEPTLPAMLIGDK HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHCCH LRLQQILINLAGNALKFTTQGQVVLAVRERARREGEVELRIEVSDTGIGIAPEQLSRIFE HHHHHHHHHHCCCEEEEECCCCEEEHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHH GFTQAEASTTRRFGGTGLGLVISRRLVELMGGQLRVESQLGCGSRFWFDLTLGMAADQPL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCCH AQLPEPLGQLNVLVVDDNPLAGEILMDTISTVGWRAEYADGGEEALEKVHGAGSAGQRYD HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCEEE VVLMDWRMPGLDGVGVAEVMRQQLAGDKPPVIIMVTAFGREVLAEAAERPNPPFNDFLTK EEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCHHHHCCC PITPQQLVDAVVRSVTGEGEAERTPATTAFGRRLDGMSVLLVEDNALNRQVASELLQEEG CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCC ARVSLAEGGLSGVSQAVSADPAFDIVIMDVQMPDIDGLEATRRIRADMRCQRLPILAMTA CEEEECCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEC NASQADRAACLAAGMNDHVGKPIDIDELVPKLLALAGREGGPDGTAASVPAPRADDSGAL CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH VESLPSRLRRFGNKLRVYRAALATFRPECETLLSGIAESGRLDARPELASGLHTLKGLAA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TLGAQALSRLAAELEKRARDGEAISGEDLERLRGLLGDSVAQLFDSLPAEETGKTAKPLP HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DGDWRRQLRDILALLEDSNLAAIDLVDELLDRPLGAQEDSVREVAACVQRLQFEQAIAIV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RELLALAD HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1314807 [H]