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The map label for this gene is recR

Identifier: 34497067

GI number: 34497067

Start: 1739566

End: 1740162

Strand: Direct

Name: recR

Synonym: CV_1612

Alternate gene names: 34497067

Gene position: 1739566-1740162 (Clockwise)

Preceding gene: 34497066

Following gene: 34497068

Centisome position: 36.61

GC content: 66.67

Gene sequence:

>597_bases
ATGAAGAATCCTCCCGCGCTGGAGCAGTTGATCTCCGCGTTGAAAGTGTTGCCGGGCGTGGGGCCGAAAACCGCGCAGCG
GATGGCTTTCCACCTGCTGCAGCGCGACAAGCAGGGCGCCGACAAGCTGGCGCGCGCGCTGGATCGGGCATTGACCCAGC
TCACGCATTGCCAGCGCTGCAACACCTTCAGCGAGGCGGAGCTGTGCGCCATCTGCGCCGACGAGACGCGCCGCCGGGAC
CAGCTGTGCATCGTCGAAATGCCGGCCGACCTGATGATGCTGGAGCAGGCCAAGTGCTTCGACGGCCTGTATTTCGTGCT
GATGGGGCGGATTTCGCCGCTGGACAACATCGGGCCCAAGGACCTGCACCTGGACAAGCTGTTGGCGCGGGCGCTGGACG
GGCAGGTGAGCGAGATCGTGATCGCCACCAACTTCACCGCCGAGGGCGAGGTGACGTCCCACATGCTCAGCGAGTTGTTC
AAGGAGCGCGGCCTGACGGTGACGCGCATCGCGCGCGGCATGCCGGTGGGCGGCGAGCTGGAATACGTCGACCTGGGCAC
GCTGGCGCAGGCGGTGTACGAGCGCCGCGGCGTGTAG

Upstream 100 bases:

>100_bases
TTCGGCGCGACAGCGGCCCGCATCCCATGCCGCGGCGCTGCGCCGAGTTTCCCATCCGCGTCCCGGGACGCCGTTTTGCC
TGCAGGTTGATGCCGTGTCG

Downstream 100 bases:

>100_bases
TCCGGCATTGTCTTGTCATGGCCGCTTCGCTAGAATCGGTCCTTCCTACCCCGATTTCATCCTCAGGAGCCCTGTCGAAA
TGAACAAGTGATGCCCGGAT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRCNTFSEAELCAICADETRRRD
QLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPKDLHLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELF
KERGLTVTRIARGMPVGGELEYVDLGTLAQAVYERRGV

Sequences:

>Translated_198_residues
MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRCNTFSEAELCAICADETRRRD
QLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPKDLHLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELF
KERGLTVTRIARGMPVGGELEYVDLGTLAQAVYERRGV
>Mature_198_residues
MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRCNTFSEAELCAICADETRRRD
QLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPKDLHLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELF
KERGLTVTRIARGMPVGGELEYVDLGTLAQAVYERRGV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=49.748743718593, Blast_Score=207, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CHRVO (Q7NXL4)

Other databases:

- EMBL:   AE016825
- RefSeq:   NP_901282.1
- ProteinModelPortal:   Q7NXL4
- SMR:   Q7NXL4
- GeneID:   2550823
- GenomeReviews:   AE016825_GR
- KEGG:   cvi:CV_1612
- NMPDR:   fig|243365.1.peg.1612
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q7NXL4
- ProtClustDB:   PRK00076
- BioCyc:   CVIO243365:CV_1612-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21926; Mature: 21926

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRC
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
NTFSEAELCAICADETRRRDQLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPK
CCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DLHLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELFKERGLTVTRIARGMPVGGEL
HHHHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCE
EYVDLGTLAQAVYERRGV
EEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNPPALEQLISALKVLPGVGPKTAQRMAFHLLQRDKQGADKLARALDRALTQLTHCQRC
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
NTFSEAELCAICADETRRRDQLCIVEMPADLMMLEQAKCFDGLYFVLMGRISPLDNIGPK
CCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DLHLDKLLARALDGQVSEIVIATNFTAEGEVTSHMLSELFKERGLTVTRIARGMPVGGEL
HHHHHHHHHHHHCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCE
EYVDLGTLAQAVYERRGV
EEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782