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The map label for this gene is ybaB [C]

Identifier: 34497066

GI number: 34497066

Start: 1739091

End: 1739438

Strand: Direct

Name: ybaB [C]

Synonym: CV_1611

Alternate gene names: 34497066

Gene position: 1739091-1739438 (Clockwise)

Preceding gene: 34497065

Following gene: 34497067

Centisome position: 36.6

GC content: 61.78

Gene sequence:

>348_bases
GTGACCGCGATGTTCGGTAAAGCTGGTATCGCCGGCCTGATGAAACAGGCCCAGCAAATGCAGGAAAACATGAAGAAGGC
CCAGGAAGAGCTGGCCAAGGTGGAAGTGGAAGGCCAGTCCGGCGCCGGCATGGTCAAGGTCACCATGACCTGCTCCCACG
ACGTCAAGCGCGTCGCCATCGACGACAGCGTGCTGGAAGACGCCAAGGAAGACAAGGAAATGCTGGAGGACCTGATCGCC
GCCGCCTTCAACGACGCGGTGCGCAAGGTCGAGGCCACCACCCAGGAGCGGATGTCCGGCTTCACCAACGGCCTGAACCT
GCCGGCCGGGATGAAGTTCCCGTTCTGA

Upstream 100 bases:

>100_bases
CCGTCGCCCGCGAGTGCATGCAAAACGATCCGGTGGTGCAGCAGATGGTACGCGAATTCGGCGCCACGCTGCTCATCGAG
ACCATTCAACCCGTACAGGA

Downstream 100 bases:

>100_bases
TCCCAGGGCCCGGCGACGGGCCTTTTCTTCGGCGCGACAGCGGCCCGCATCCCATGCCGCGGCGCTGCGCCGAGTTTCCC
ATCCGCGTCCCGGGACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTAMFGKAGIAGLMKQAQQMQENMKKAQEELAKVEVEGQSGAGMVKVTMTCSHDVKRVAIDDSVLEDAKEDKEMLEDLIA
AAFNDAVRKVEATTQERMSGFTNGLNLPAGMKFPF

Sequences:

>Translated_115_residues
MTAMFGKAGIAGLMKQAQQMQENMKKAQEELAKVEVEGQSGAGMVKVTMTCSHDVKRVAIDDSVLEDAKEDKEMLEDLIA
AAFNDAVRKVEATTQERMSGFTNGLNLPAGMKFPF
>Mature_114_residues
TAMFGKAGIAGLMKQAQQMQENMKKAQEELAKVEVEGQSGAGMVKVTMTCSHDVKRVAIDDSVLEDAKEDKEMLEDLIAA
AFNDAVRKVEATTQERMSGFTNGLNLPAGMKFPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family [H]

Homologues:

Organism=Escherichia coli, GI1786677, Length=112, Percent_Identity=60.7142857142857, Blast_Score=143, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004401 [H]

Pfam domain/function: PF02575 DUF149 [H]

EC number: NA

Molecular weight: Translated: 12517; Mature: 12385

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.7 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMFGKAGIAGLMKQAQQMQENMKKAQEELAKVEVEGQSGAGMVKVTMTCSHDVKRVAI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
DDSVLEDAKEDKEMLEDLIAAAFNDAVRKVEATTQERMSGFTNGLNLPAGMKFPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TAMFGKAGIAGLMKQAQQMQENMKKAQEELAKVEVEGQSGAGMVKVTMTCSHDVKRVAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHH
DDSVLEDAKEDKEMLEDLIAAAFNDAVRKVEATTQERMSGFTNGLNLPAGMKFPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]