| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is fabI [H]
Identifier: 34497038
GI number: 34497038
Start: 1707187
End: 1707975
Strand: Reverse
Name: fabI [H]
Synonym: CV_1583
Alternate gene names: 34497038
Gene position: 1707975-1707187 (Counterclockwise)
Preceding gene: 34497042
Following gene: 34497033
Centisome position: 35.95
GC content: 65.02
Gene sequence:
>789_bases ATGGGCTTTCTGCAAGGCAAGAAAATCCTGATCACCGGCATGATCTCCAATCGCTCCATCGCCTACGGCATCGCTCAGGC CTGTCATCGCGAAGGCGCCGAGCTGGCCTTCACTTACGTGGTGGACAAGCTGGAGGAACGCGTCCGTGAAATGGCGGCCG ACTTCGGCTCCCAGCTGGTCTACCGCTGCGACGTGCAGAACGACGACGAGATCAACCAGCTGTTCGTCGACCTCGCCAAG GAATGGGACGGTCTGGACGGCCTGGTGCACTCGATCGGCTTCGCCCCGCGCGAAGCGCTGGAAGGCGACTTCCTGGATTC TCTGAGCCGCGAAGCGTTCCAGATCGCCCACGACGTGTCGTCCTACAGCTTCCCGGCGCTGGCCAAGGCCGCGCGCCCGA TGATGCAGGGCCGCAAGGCCGCGCTGCTGACCCTGTCCTACCTGGGCGCGGTCCGCGCGATCCCGAACTACAACGTGATG GGCCTGGCCAAGGCCAGCCTGGAGGCGTCGGTGCGCTTCATGGCCGCCAGCCTGGGCAAGGAAGGCATCCGCGTCAACGG CATCTCCGCCGGTCCGATCAAGACCCTGGCCGCCTCCGGCATCTCCGGCTTCTCCAAGCTGCTGAACATGGCGTCCAGCC AGGCTTGCCTGCGCCGCAACGTGACCACCGAGGAAGTCGGCAACGCCGCCGCCTTCATGCTGTCGGACCTGTCGTCCGGC ATCACCGGCGAGATCACCTACGTCGACGCCGGCTACAGCGTCAACGCGCTGAACGTGCCGGAAGAATAA
Upstream 100 bases:
>100_bases GGGTTATCCTTGCTGAAACGGGCAGTTAGCGCAGACGACGCTGCTGCAAATCGCCGGCATTCGGTATAATGACCGGCTGT TTACATGAGAAGGACACCAA
Downstream 100 bases:
>100_bases GCGCTTTCGCGCGACCCAAGGCAGACGGCGCGGTTTTCCCGCGCCGTTTTTCATTCACGCGCCGCAATCGGCGCCGGCCA GCGTCCGCAAACCGCCGCCG
Product: enoyl-ACP reductase
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGFLQGKKILITGMISNRSIAYGIAQACHREGAELAFTYVVDKLEERVREMAADFGSQLVYRCDVQNDDEINQLFVDLAK EWDGLDGLVHSIGFAPREALEGDFLDSLSREAFQIAHDVSSYSFPALAKAARPMMQGRKAALLTLSYLGAVRAIPNYNVM GLAKASLEASVRFMAASLGKEGIRVNGISAGPIKTLAASGISGFSKLLNMASSQACLRRNVTTEEVGNAAAFMLSDLSSG ITGEITYVDAGYSVNALNVPEE
Sequences:
>Translated_262_residues MGFLQGKKILITGMISNRSIAYGIAQACHREGAELAFTYVVDKLEERVREMAADFGSQLVYRCDVQNDDEINQLFVDLAK EWDGLDGLVHSIGFAPREALEGDFLDSLSREAFQIAHDVSSYSFPALAKAARPMMQGRKAALLTLSYLGAVRAIPNYNVM GLAKASLEASVRFMAASLGKEGIRVNGISAGPIKTLAASGISGFSKLLNMASSQACLRRNVTTEEVGNAAAFMLSDLSSG ITGEITYVDAGYSVNALNVPEE >Mature_261_residues GFLQGKKILITGMISNRSIAYGIAQACHREGAELAFTYVVDKLEERVREMAADFGSQLVYRCDVQNDDEINQLFVDLAKE WDGLDGLVHSIGFAPREALEGDFLDSLSREAFQIAHDVSSYSFPALAKAARPMMQGRKAALLTLSYLGAVRAIPNYNVMG LAKASLEASVRFMAASLGKEGIRVNGISAGPIKTLAASGISGFSKLLNMASSQACLRRNVTTEEVGNAAAFMLSDLSSGI TGEITYVDAGYSVNALNVPEE
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=258, Percent_Identity=62.4031007751938, Blast_Score=330, Evalue=7e-92, Organism=Escherichia coli, GI87082100, Length=263, Percent_Identity=29.277566539924, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 28102; Mature: 27971
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLQGKKILITGMISNRSIAYGIAQACHREGAELAFTYVVDKLEERVREMAADFGSQLV CCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE YRCDVQNDDEINQLFVDLAKEWDGLDGLVHSIGFAPREALEGDFLDSLSREAFQIAHDVS EEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHH SYSFPALAKAARPMMQGRKAALLTLSYLGAVRAIPNYNVMGLAKASLEASVRFMAASLGK CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCC EGIRVNGISAGPIKTLAASGISGFSKLLNMASSQACLRRNVTTEEVGNAAAFMLSDLSSG CCCEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC ITGEITYVDAGYSVNALNVPEE CCEEEEEEECCCEEEECCCCCC >Mature Secondary Structure GFLQGKKILITGMISNRSIAYGIAQACHREGAELAFTYVVDKLEERVREMAADFGSQLV CCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE YRCDVQNDDEINQLFVDLAKEWDGLDGLVHSIGFAPREALEGDFLDSLSREAFQIAHDVS EEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHH SYSFPALAKAARPMMQGRKAALLTLSYLGAVRAIPNYNVMGLAKASLEASVRFMAASLGK CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCC EGIRVNGISAGPIKTLAASGISGFSKLLNMASSQACLRRNVTTEEVGNAAAFMLSDLSSG CCCEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC ITGEITYVDAGYSVNALNVPEE CCEEEEEEECCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]