| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496977
Identifier: 34496977
GI number: 34496977
Start: 1628752
End: 1629879
Strand: Direct
Name: 34496977
Synonym: CV_1522
Alternate gene names: NA
Gene position: 1628752-1629879 (Clockwise)
Preceding gene: 34496976
Following gene: 34496978
Centisome position: 34.28
GC content: 71.72
Gene sequence:
>1128_bases ATGAGACGGGACGCGCCGCCATCGCCGCTGGGGCTGTTTCGCGCGGTCTCGCTGCTGTCCTGTCTGGCGCTGTGGCTGCG GCAAGCGCTGCCGCTGGCATGGCTGGGCCAGGAGGGCTTTTCCCATCTGCACCTGCGCCTGCTGTTGTTGCTGGGGCCGG AGGCGGAGCCGTGGATGGCGCAGGCGGCCTATGGGCTGGGCTTCGCCGGATTCGGCTGGATGCTGTGGCGCTGCGCCGCC GCGGGCGAGCAGACACCGCGGCCGGCGGCGAGAGCTGTCCTGCTGGCGGGCCAGATCGCGCTGGCGCTGCTGATCGACGA CAAGCTGCTGTACCTGACTGCGGCCGAGCTGGCGCTGCTGTTGTCCTGGCGGGCTGCCTGCATGACGCTGGGCGCGCAGC TGGCCTTGATGGCGCTGGCTTGCGCCTGGCAGGCGCAGCGGCTGGACGAGAGCGAGCTGGTTTGCAATGTCAGCGGCTCC GAGGTCCAGGCCCCGCCGCTGGAGCGGCGGCGGGGCCAATTGTGGCTGGACGCGGCGCTGGGCGGCGGTTTTCAGCTGCT GACGTTTGGCGTCGGCTGCCTGGGCGCGGCCGAGCGGCGGCGGCGGGAAAGGCTGGAAGCCACCCATGCCAGCTTGCTGG CCGCGCGGCAATTGCTGGCCGCCGCCGCCGGCAACGGCGAACGCTTGCGCGTCGCGCGCGAGCTGCACGACGGCCTGGGC CATCATCTTTCGGCTCTCAATCTGCAATTGGAGCTGATGCTGAGGCGCGGCGCAGGCGAGGCGGAACCGCCGTTGCGGGA GGCCCGGCAGGCGGCGCGGCAGTTGCTGGCTGAGGTGAGATCCATGGTCGGCGCGGAGCGCAGCGGCAGGGCCGCGCCCT TGGAGGCCGTGCTGCGCCGCCTGTGCGAGGGGAGGCGGATAGCGGCCGACATCGCGCCGCTGGCGGCGTCGGACGAGCTG GCTTGGCGGGTGTTCGCGGCGGCGAGGGAAGGATTGGACGCCGTGGGCGATCGCCCAGTCAGGCTGCGCCTGTCCGGCAC GGATGACGGCGGCGCGGCGCTGAGCTTGGACTATCTGGATGGAAAGGACGAGGCATGGACCAAGGTATTCCGGGAGGTCG GAGCGTGA
Upstream 100 bases:
>100_bases GCGAGCGGGTGGAGGGCCGGGGCGGCACGCTGGACATCCTGTCGCCGCAGGCGGGCGGCTGCTGCCTGCGCGTCTGGCTG CCGCTGGTGGGAGGCGAGCG
Downstream 100 bases:
>100_bases TCCGCGTCGGCGTGGTGGACGATCAGGCGCTGGTGCGCAGCGGCGTGCGCGGCCTGCTGGAATTGACCGGCGACATCCAG GTGGTGCTGGAGGCCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRRDAPPSPLGLFRAVSLLSCLALWLRQALPLAWLGQEGFSHLHLRLLLLLGPEAEPWMAQAAYGLGFAGFGWMLWRCAA AGEQTPRPAARAVLLAGQIALALLIDDKLLYLTAAELALLLSWRAACMTLGAQLALMALACAWQAQRLDESELVCNVSGS EVQAPPLERRRGQLWLDAALGGGFQLLTFGVGCLGAAERRRRERLEATHASLLAARQLLAAAAGNGERLRVARELHDGLG HHLSALNLQLELMLRRGAGEAEPPLREARQAARQLLAEVRSMVGAERSGRAAPLEAVLRRLCEGRRIAADIAPLAASDEL AWRVFAAAREGLDAVGDRPVRLRLSGTDDGGAALSLDYLDGKDEAWTKVFREVGA
Sequences:
>Translated_375_residues MRRDAPPSPLGLFRAVSLLSCLALWLRQALPLAWLGQEGFSHLHLRLLLLLGPEAEPWMAQAAYGLGFAGFGWMLWRCAA AGEQTPRPAARAVLLAGQIALALLIDDKLLYLTAAELALLLSWRAACMTLGAQLALMALACAWQAQRLDESELVCNVSGS EVQAPPLERRRGQLWLDAALGGGFQLLTFGVGCLGAAERRRRERLEATHASLLAARQLLAAAAGNGERLRVARELHDGLG HHLSALNLQLELMLRRGAGEAEPPLREARQAARQLLAEVRSMVGAERSGRAAPLEAVLRRLCEGRRIAADIAPLAASDEL AWRVFAAAREGLDAVGDRPVRLRLSGTDDGGAALSLDYLDGKDEAWTKVFREVGA >Mature_375_residues MRRDAPPSPLGLFRAVSLLSCLALWLRQALPLAWLGQEGFSHLHLRLLLLLGPEAEPWMAQAAYGLGFAGFGWMLWRCAA AGEQTPRPAARAVLLAGQIALALLIDDKLLYLTAAELALLLSWRAACMTLGAQLALMALACAWQAQRLDESELVCNVSGS EVQAPPLERRRGQLWLDAALGGGFQLLTFGVGCLGAAERRRRERLEATHASLLAARQLLAAAAGNGERLRVARELHDGLG HHLSALNLQLELMLRRGAGEAEPPLREARQAARQLLAEVRSMVGAERSGRAAPLEAVLRRLCEGRRIAADIAPLAASDEL AWRVFAAAREGLDAVGDRPVRLRLSGTDDGGAALSLDYLDGKDEAWTKVFREVGA
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40449; Mature: 40449
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDAPPSPLGLFRAVSLLSCLALWLRQALPLAWLGQEGFSHLHLRLLLLLGPEAEPWMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCCHHHH QAAYGLGFAGFGWMLWRCAAAGEQTPRPAARAVLLAGQIALALLIDDKLLYLTAAELALL HHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LSWRAACMTLGAQLALMALACAWQAQRLDESELVCNVSGSEVQAPPLERRRGQLWLDAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCEEEEECC GGGFQLLTFGVGCLGAAERRRRERLEATHASLLAARQLLAAAAGNGERLRVARELHDGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HHLSALNLQLELMLRRGAGEAEPPLREARQAARQLLAEVRSMVGAERSGRAAPLEAVLRR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LCEGRRIAADIAPLAASDELAWRVFAAAREGLDAVGDRPVRLRLSGTDDGGAALSLDYLD HHCCCEEHHHHHCCCCCCHHHHHHHHHHHHCHHHHCCCCEEEEECCCCCCCCEEEEECCC GKDEAWTKVFREVGA CCHHHHHHHHHHHCC >Mature Secondary Structure MRRDAPPSPLGLFRAVSLLSCLALWLRQALPLAWLGQEGFSHLHLRLLLLLGPEAEPWMA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHCCCCCCHHHH QAAYGLGFAGFGWMLWRCAAAGEQTPRPAARAVLLAGQIALALLIDDKLLYLTAAELALL HHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH LSWRAACMTLGAQLALMALACAWQAQRLDESELVCNVSGSEVQAPPLERRRGQLWLDAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHCCCEEEEECC GGGFQLLTFGVGCLGAAERRRRERLEATHASLLAARQLLAAAAGNGERLRVARELHDGLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH HHLSALNLQLELMLRRGAGEAEPPLREARQAARQLLAEVRSMVGAERSGRAAPLEAVLRR HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LCEGRRIAADIAPLAASDELAWRVFAAAREGLDAVGDRPVRLRLSGTDDGGAALSLDYLD HHCCCEEHHHHHCCCCCCHHHHHHHHHHHHCHHHHCCCCEEEEECCCCCCCCEEEEECCC GKDEAWTKVFREVGA CCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA