| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496944
Identifier: 34496944
GI number: 34496944
Start: 1590268
End: 1591377
Strand: Reverse
Name: 34496944
Synonym: CV_1489
Alternate gene names: NA
Gene position: 1591377-1590268 (Counterclockwise)
Preceding gene: 34496945
Following gene: 34496943
Centisome position: 33.5
GC content: 68.74
Gene sequence:
>1110_bases ATGAAAACCCGATTCTCCCGCCTGCTGGCCGCCGCGCTGATCGCAGCCGCCGCGCTGTCGGCCCAGGCCGCCGCCGTCAC CGACATCGCCGGCCGCAAAGTGGAAGTGCCGGCCAAGGTGAACCGCATCCTGCTGGGCGAAGGCCGGCTGTTCTATTCCT TGGCGCTGCTGGAAGGCAAGCAGCCGCTGGCCCGCATCGCCGGCTGGCAGGGCGATTTCCGCCAGCTGGACCCGCAGACC TACGCCCAGTACAAGAAACGCTTTCCCGAGATCGACCGCATCCCGCTGATCGGCCAGACCAGCGAAAACTCGGTCAGCGC CGAAAAGGTGCTGACGCTGAAGCCGGACATCGCCATCTTCAGCATCTCCGGCCACGGCCCGGGCCTGAACAACCCCATCG TCCAGCAGCTGCAAGCGGCCAAGGTGCCGGTGGTGTTCGTCGATTTCCGCAACGCGCCGCTGGAGCACACCGTGCCCAGC CTGCGCATCATGGGCAAGGCGCTGCAGCGCGAGGCCGAAGCCGAGCGCTTCATCCGCTTCTACCAAAGCCGGATCGACGC CATCCGCAACACGGTGGCCGCCATCCCGGCGCAGCAGAAACCCAAGGTCTTCCTCGATCTGCGCGCCGCCGCCTTCCCCA ATGTGACCAGCGCCGGCAAGGGCAGCCTGGGCGAGCTGGTGGACGCCGCCGGCGGCGTCAATATCGGCGACAAGCTGATT CCCGGCGCGGTGGGCGAGGTGAACATGGAGCACGTGCTGGCCGCCAGGCCAGACTGGTACATCGGCACCGGCAGCGCCGA CGCGGCCGACAAGATCGGCGTCCAGTTCGGCGCCGACATCTCGCCGGCCCAGGCCCGGGCATCGCTGGCCCGCGCCGCCG CGCGCAAGCCGGTGAGCGCGCTCGCCGCCGTGCGCGACGGCCGCACTTTCGGCGCCTGGCACCACTTCTACAACACGCCC TACCACATCGTGCTGCTGGAAGCCTTCGCCAAGACGCTGCAGCCGGCGCGCTTCGCCAAGCTGGACCCCGACGCCAGCTG GCAGCAGCTGCACCGCGACTTCCTGGCGATCCCGCCGCAGGGCACCTACTGGGTCAAGGGAGGCAAATGA
Upstream 100 bases:
>100_bases GACAAGCTGGCCAAGATCGAATTCATCATGGACGAGCACCTGGGCCTGATGGCCAAGCAGCCGGAACTCAAGCTCGACTG GCAAAAGTAAAGGACGCCCG
Downstream 100 bases:
>100_bases ACGACTCCGCCCTGCCCCCGCTCACCGCCGCCGCGGTGAGCGGCGACTACCGCCGCGCGCTGCTGCGCCGGCTGCTGCTG GTGGCCGGCCTGCTGGCGCT
Product: ABC transporter substrate-binding protein
Products: NA
Alternate protein names: Ferrichrome/Ferrioxamine B Periplasmic Transporter; Iron Transporter; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC Transporter; Iron(III) ABC Transporter; Ferrisiderophore Receptor Irp6A; Copper Amine Oxidase Domain Protein; Copper Amine Oxidase Domain-Containing Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKTRFSRLLAAALIAAAALSAQAAAVTDIAGRKVEVPAKVNRILLGEGRLFYSLALLEGKQPLARIAGWQGDFRQLDPQT YAQYKKRFPEIDRIPLIGQTSENSVSAEKVLTLKPDIAIFSISGHGPGLNNPIVQQLQAAKVPVVFVDFRNAPLEHTVPS LRIMGKALQREAEAERFIRFYQSRIDAIRNTVAAIPAQQKPKVFLDLRAAAFPNVTSAGKGSLGELVDAAGGVNIGDKLI PGAVGEVNMEHVLAARPDWYIGTGSADAADKIGVQFGADISPAQARASLARAAARKPVSALAAVRDGRTFGAWHHFYNTP YHIVLLEAFAKTLQPARFAKLDPDASWQQLHRDFLAIPPQGTYWVKGGK
Sequences:
>Translated_369_residues MKTRFSRLLAAALIAAAALSAQAAAVTDIAGRKVEVPAKVNRILLGEGRLFYSLALLEGKQPLARIAGWQGDFRQLDPQT YAQYKKRFPEIDRIPLIGQTSENSVSAEKVLTLKPDIAIFSISGHGPGLNNPIVQQLQAAKVPVVFVDFRNAPLEHTVPS LRIMGKALQREAEAERFIRFYQSRIDAIRNTVAAIPAQQKPKVFLDLRAAAFPNVTSAGKGSLGELVDAAGGVNIGDKLI PGAVGEVNMEHVLAARPDWYIGTGSADAADKIGVQFGADISPAQARASLARAAARKPVSALAAVRDGRTFGAWHHFYNTP YHIVLLEAFAKTLQPARFAKLDPDASWQQLHRDFLAIPPQGTYWVKGGK >Mature_369_residues MKTRFSRLLAAALIAAAALSAQAAAVTDIAGRKVEVPAKVNRILLGEGRLFYSLALLEGKQPLARIAGWQGDFRQLDPQT YAQYKKRFPEIDRIPLIGQTSENSVSAEKVLTLKPDIAIFSISGHGPGLNNPIVQQLQAAKVPVVFVDFRNAPLEHTVPS LRIMGKALQREAEAERFIRFYQSRIDAIRNTVAAIPAQQKPKVFLDLRAAAFPNVTSAGKGSLGELVDAAGGVNIGDKLI PGAVGEVNMEHVLAARPDWYIGTGSADAADKIGVQFGADISPAQARASLARAAARKPVSALAAVRDGRTFGAWHHFYNTP YHIVLLEAFAKTLQPARFAKLDPDASWQQLHRDFLAIPPQGTYWVKGGK
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39909; Mature: 39909
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRFSRLLAAALIAAAALSAQAAAVTDIAGRKVEVPAKVNRILLGEGRLFYSLALLEGK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCEEEEECCCEEEEEEHHCCC QPLARIAGWQGDFRQLDPQTYAQYKKRFPEIDRIPLIGQTSENSVSAEKVLTLKPDIAIF CHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHEEEEECCCEEEE SISGHGPGLNNPIVQQLQAAKVPVVFVDFRNAPLEHTVPSLRIMGKALQREAEAERFIRF EECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH YQSRIDAIRNTVAAIPAQQKPKVFLDLRAAAFPNVTSAGKGSLGELVDAAGGVNIGDKLI HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHC PGAVGEVNMEHVLAARPDWYIGTGSADAADKIGVQFGADISPAQARASLARAAARKPVSA CCCCCCCCHHHHHCCCCCEEEECCCCCCHHHCCHHCCCCCCHHHHHHHHHHHHHHCHHHH LAAVRDGRTFGAWHHFYNTPYHIVLLEAFAKTLQPARFAKLDPDASWQQLHRDFLAIPPQ HHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHEECCCC GTYWVKGGK CCEEECCCC >Mature Secondary Structure MKTRFSRLLAAALIAAAALSAQAAAVTDIAGRKVEVPAKVNRILLGEGRLFYSLALLEGK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHCEEEEECCCEEEEEEHHCCC QPLARIAGWQGDFRQLDPQTYAQYKKRFPEIDRIPLIGQTSENSVSAEKVLTLKPDIAIF CHHHHHCCCCCCHHHCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHEEEEECCCEEEE SISGHGPGLNNPIVQQLQAAKVPVVFVDFRNAPLEHTVPSLRIMGKALQREAEAERFIRF EECCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHH YQSRIDAIRNTVAAIPAQQKPKVFLDLRAAAFPNVTSAGKGSLGELVDAAGGVNIGDKLI HHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHC PGAVGEVNMEHVLAARPDWYIGTGSADAADKIGVQFGADISPAQARASLARAAARKPVSA CCCCCCCCHHHHHCCCCCEEEECCCCCCHHHCCHHCCCCCCHHHHHHHHHHHHHHCHHHH LAAVRDGRTFGAWHHFYNTPYHIVLLEAFAKTLQPARFAKLDPDASWQQLHRDFLAIPPQ HHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHEECCCC GTYWVKGGK CCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA