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The map label for this gene is fecD [C]

Identifier: 34496943

GI number: 34496943

Start: 1589204

End: 1590271

Strand: Reverse

Name: fecD [C]

Synonym: CV_1488

Alternate gene names: 34496943

Gene position: 1590271-1589204 (Counterclockwise)

Preceding gene: 34496944

Following gene: 34496942

Centisome position: 33.47

GC content: 71.82

Gene sequence:

>1068_bases
ATGAACGACTCCGCCCTGCCCCCGCTCACCGCCGCCGCGGTGAGCGGCGACTACCGCCGCGCGCTGCTGCGCCGGCTGCT
GCTGGTGGCCGGCCTGCTGGCGCTGCTGTCGCTGTCGCTGTCGCTGGACGTCACCACCGGCGCCAGCGGCATGCCGCTGG
CCGAGTTCTGGCGCACGCTGCTGGAGCCGTCCGCCGCCGACCCGGCCACCGCCGTCATCGTCTGGGACATCCGCCTGCCC
TACGCGCTGATCGCCGTCGGCGCCGGCCTGGCGCTGGGCCTGGCCGGCGCCGAGATGCAGACGGTGCTGCACAATCCGCT
GGCCGATCCGTTCACGCTGGGCCTGCAGCCGGCCGCCGCCTTCGGCGCGGCGCTGGCGCTGCTGCTGGGCTTCAGCCTGC
CCGGCGTGCCGGCGTCGTGGATGCTGCCGGTCAACGCCTTCGTGTTCGCGCTGGGCTCGGCGCTGCTGCTGGACCTGGTG
GCGCGCTGGACGCGGATGGCCGCCAGCGGCGTGGTGCTGTTCGGCATCGCGCTGTTCTTCAGCTTCAACGCCTTGGTGTC
GCTGCTGCAATTCGTCTCCACCGCCGACGCGCTGCAGGATCTGGTGTTCTGGCTGATGGGCAGCCTGTCACGCGCCGACT
GGCCAAAGATCGGCCTGATCTTCGCCGCCTTCGCGCTGATCCTGCCGTGGTCGCTGGCCAACGCCTGGCGGCTGACCGCG
CTGCGCCTCGGCGAGGACCGCGCCGCCAGCTTCGGCATCGACGTGCGCCGGCTGCGGCTGACCGCCCTGCTGCGCGCCAG
CCTGCTCACCTCGCTGGCGGTGGCCTTCGTCGGCACCATCGGCTTCATCGGCCTGATCGCGCCGCACATCGCCCGCCGGC
TGGTGGGCGAGGACCACCGCTTCTACCTGCCGGTGAGCGCGCTGACCGGCGCGGCCATCCTGTCCATGGCCTCGGTGGTG
ACCAAGAACCTGATTCCCGGCGTCATCGTGCCGGTGGGCATCGTCACCGCGCTGGTGGGCATTCCCTTCTTCATCGTCAT
CGTCTTGCGCAACGGAGGCCGGACATGA

Upstream 100 bases:

>100_bases
CGCGCTTCGCCAAGCTGGACCCCGACGCCAGCTGGCAGCAGCTGCACCGCGACTTCCTGGCGATCCCGCCGCAGGGCACC
TACTGGGTCAAGGGAGGCAA

Downstream 100 bases:

>100_bases
GCGAGCAGCTGTCCATCGAAAACCTGTCGGTCAGCTACGGCAAGCGCCGCGTCATCGACAAGCTGTCCGTCCCCTGTATG
CGGGCGGGCGAGGTCACCGC

Product: ferric citrate transport system permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNDSALPPLTAAAVSGDYRRALLRRLLLVAGLLALLSLSLSLDVTTGASGMPLAEFWRTLLEPSAADPATAVIVWDIRLP
YALIAVGAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAAFGAALALLLGFSLPGVPASWMLPVNAFVFALGSALLLDLV
ARWTRMAASGVVLFGIALFFSFNALVSLLQFVSTADALQDLVFWLMGSLSRADWPKIGLIFAAFALILPWSLANAWRLTA
LRLGEDRAASFGIDVRRLRLTALLRASLLTSLAVAFVGTIGFIGLIAPHIARRLVGEDHRFYLPVSALTGAAILSMASVV
TKNLIPGVIVPVGIVTALVGIPFFIVIVLRNGGRT

Sequences:

>Translated_355_residues
MNDSALPPLTAAAVSGDYRRALLRRLLLVAGLLALLSLSLSLDVTTGASGMPLAEFWRTLLEPSAADPATAVIVWDIRLP
YALIAVGAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAAFGAALALLLGFSLPGVPASWMLPVNAFVFALGSALLLDLV
ARWTRMAASGVVLFGIALFFSFNALVSLLQFVSTADALQDLVFWLMGSLSRADWPKIGLIFAAFALILPWSLANAWRLTA
LRLGEDRAASFGIDVRRLRLTALLRASLLTSLAVAFVGTIGFIGLIAPHIARRLVGEDHRFYLPVSALTGAAILSMASVV
TKNLIPGVIVPVGIVTALVGIPFFIVIVLRNGGRT
>Mature_355_residues
MNDSALPPLTAAAVSGDYRRALLRRLLLVAGLLALLSLSLSLDVTTGASGMPLAEFWRTLLEPSAADPATAVIVWDIRLP
YALIAVGAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAAFGAALALLLGFSLPGVPASWMLPVNAFVFALGSALLLDLV
ARWTRMAASGVVLFGIALFFSFNALVSLLQFVSTADALQDLVFWLMGSLSRADWPKIGLIFAAFALILPWSLANAWRLTA
LRLGEDRAASFGIDVRRLRLTALLRASLLTSLAVAFVGTIGFIGLIAPHIARRLVGEDHRFYLPVSALTGAAILSMASVV
TKNLIPGVIVPVGIVTALVGIPFFIVIVLRNGGRT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=294, Percent_Identity=36.734693877551, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=35.4385964912281, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786805, Length=292, Percent_Identity=35.6164383561644, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790741, Length=288, Percent_Identity=35.4166666666667, Blast_Score=108, Evalue=7e-25,
Organism=Escherichia coli, GI1786347, Length=289, Percent_Identity=32.1799307958478, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1786804, Length=297, Percent_Identity=32.6599326599327, Blast_Score=82, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37352; Mature: 37352

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSALPPLTAAAVSGDYRRALLRRLLLVAGLLALLSLSLSLDVTTGASGMPLAEFWRTL
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHH
LEPSAADPATAVIVWDIRLPYALIAVGAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAA
HCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCHHHH
FGAALALLLGFSLPGVPASWMLPVNAFVFALGSALLLDLVARWTRMAASGVVLFGIALFF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFNALVSLLQFVSTADALQDLVFWLMGSLSRADWPKIGLIFAAFALILPWSLANAWRLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRLGEDRAASFGIDVRRLRLTALLRASLLTSLAVAFVGTIGFIGLIAPHIARRLVGEDHR
HHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FYLPVSALTGAAILSMASVVTKNLIPGVIVPVGIVTALVGIPFFIVIVLRNGGRT
EEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDSALPPLTAAAVSGDYRRALLRRLLLVAGLLALLSLSLSLDVTTGASGMPLAEFWRTL
CCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHH
LEPSAADPATAVIVWDIRLPYALIAVGAGLALGLAGAEMQTVLHNPLADPFTLGLQPAAA
HCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHCCCCHHHH
FGAALALLLGFSLPGVPASWMLPVNAFVFALGSALLLDLVARWTRMAASGVVLFGIALFF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFNALVSLLQFVSTADALQDLVFWLMGSLSRADWPKIGLIFAAFALILPWSLANAWRLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRLGEDRAASFGIDVRRLRLTALLRASLLTSLAVAFVGTIGFIGLIAPHIARRLVGEDHR
HHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FYLPVSALTGAAILSMASVVTKNLIPGVIVPVGIVTALVGIPFFIVIVLRNGGRT
EEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]