| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is entC [H]
Identifier: 34496940
GI number: 34496940
Start: 1582984
End: 1584162
Strand: Reverse
Name: entC [H]
Synonym: CV_1485
Alternate gene names: 34496940
Gene position: 1584162-1582984 (Counterclockwise)
Preceding gene: 34496941
Following gene: 34496939
Centisome position: 33.34
GC content: 70.4
Gene sequence:
>1179_bases ATGCACACCGCGTCGGCCCTGACCGGCAACGCCGAAGACGGCGAGTTTTATTTCATGTCGTCCCACCGCAGCCTGAAGGC CGGCGGTGTCCATTCCCGGATCCGCACGCCCGCCCGCGGCGCGCTGGATCCCCGCAGCGCTTTTAGCCTCGAAGTGGCGG AAGCCTTCGCCCGCGCCCGCGCCGGCGGCATCGAATCCCCAGTGCTGATGGGCGCCATCCCCTTCGACATCGACCAGCCT TCCGAATTGTTCATCCCCGCCCGCCATGCCTTCTTCGACCGCGGCGAGCGCCTGCTGGCGGCCGCCCAGCGCGCCGGCGA CGGCGGCAAGGTGGTCAGCGCGCGCAGCATTCCGGACGAGCAAGGCTTCAAGGCGGCGGTCAGCCAGGCCATCGAGCAAT TCGGCCGCGGCGAGATCCGCAAGGCGGTGCTGTCCCGCGTGCTGGAGGTGGACTTCGAGCGCCCGGTGTCGGCGGAACGG GTGTTCGACGCGGTATGCGCGCAGAATCCCAACGGCTACCAGTTCCAGCTGCCGCTGGCCGACGGCGGCCACCTGGTGGG CGTGAGTCCGGAGCTGCTGCTGCAAAAGGACGGCGCGCGCGTGCGCACCTTCCCGCTGGCCGGCTCCGCCAAGCGCCAGG GCGACCCGGCGGCTGACGCCGCCGCCAGCGCCAAGCTGCTGGATTCGGCGAAGGACCACTACGAGCACAGCCTGGTGATA GACGATATCCGCGACGTGCTGGCGCCCTATTGCTCCCGGCTGGACATCCCCGCCGCGCCGACGCTGCTGGCCACCCGCGC GATGTGGCATCTGGGCTCGCCGATAGACGGCGTGCTCTCCGACCCCTCGCTGCCGATTCTGCAGCTGGCCTGCCGCCTGC ATCCGACGCCGGCGATCTGCGGCTTCCCCACCCAGGCTTCGCGCCAACTGATCCGAGAGATCGAGCCGTTCGAGCGCGGC GTGTTCAGCGGCATCGTCGGCTGGTGCGACGAACACGGCAACGGCGAATGGGCGGTGACCATACGCTGCGCCACCGTCGC CCAGCGCCGCGTGCGGCTGTTCGCCGGCGCCGGCATCGTCGCCGCTTCCACGCCGGAAGCGGAATGGGCGGAAACCCAGG CCAAGCTCGGCACCATGCTGGGTGCCTTCGGCCTGTCCGGCCAGGAGGCGGTGGCATGA
Upstream 100 bases:
>100_bases ATATTTCCCGAGCATGAACAGGGGCATTCAACAATTGACAGGTGATGGCTTTGAATATACATTGAACGATAATTATTATC ATTATCATCGGAGCGCAATC
Downstream 100 bases:
>100_bases GCGTCGCCTTCACCCGCTGGCCGGATGACCTGGCCGCGCGCTACCGCGCCGCCGGCTACTGGAACGACCAGCCGATGACC GAGATGCTGGCGCGGCAATG
Product: isochorismate synthase
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MHTASALTGNAEDGEFYFMSSHRSLKAGGVHSRIRTPARGALDPRSAFSLEVAEAFARARAGGIESPVLMGAIPFDIDQP SELFIPARHAFFDRGERLLAAAQRAGDGGKVVSARSIPDEQGFKAAVSQAIEQFGRGEIRKAVLSRVLEVDFERPVSAER VFDAVCAQNPNGYQFQLPLADGGHLVGVSPELLLQKDGARVRTFPLAGSAKRQGDPAADAAASAKLLDSAKDHYEHSLVI DDIRDVLAPYCSRLDIPAAPTLLATRAMWHLGSPIDGVLSDPSLPILQLACRLHPTPAICGFPTQASRQLIREIEPFERG VFSGIVGWCDEHGNGEWAVTIRCATVAQRRVRLFAGAGIVAASTPEAEWAETQAKLGTMLGAFGLSGQEAVA
Sequences:
>Translated_392_residues MHTASALTGNAEDGEFYFMSSHRSLKAGGVHSRIRTPARGALDPRSAFSLEVAEAFARARAGGIESPVLMGAIPFDIDQP SELFIPARHAFFDRGERLLAAAQRAGDGGKVVSARSIPDEQGFKAAVSQAIEQFGRGEIRKAVLSRVLEVDFERPVSAER VFDAVCAQNPNGYQFQLPLADGGHLVGVSPELLLQKDGARVRTFPLAGSAKRQGDPAADAAASAKLLDSAKDHYEHSLVI DDIRDVLAPYCSRLDIPAAPTLLATRAMWHLGSPIDGVLSDPSLPILQLACRLHPTPAICGFPTQASRQLIREIEPFERG VFSGIVGWCDEHGNGEWAVTIRCATVAQRRVRLFAGAGIVAASTPEAEWAETQAKLGTMLGAFGLSGQEAVA >Mature_392_residues MHTASALTGNAEDGEFYFMSSHRSLKAGGVHSRIRTPARGALDPRSAFSLEVAEAFARARAGGIESPVLMGAIPFDIDQP SELFIPARHAFFDRGERLLAAAQRAGDGGKVVSARSIPDEQGFKAAVSQAIEQFGRGEIRKAVLSRVLEVDFERPVSAER VFDAVCAQNPNGYQFQLPLADGGHLVGVSPELLLQKDGARVRTFPLAGSAKRQGDPAADAAASAKLLDSAKDHYEHSLVI DDIRDVLAPYCSRLDIPAAPTLLATRAMWHLGSPIDGVLSDPSLPILQLACRLHPTPAICGFPTQASRQLIREIEPFERG VFSGIVGWCDEHGNGEWAVTIRCATVAQRRVRLFAGAGIVAASTPEAEWAETQAKLGTMLGAFGLSGQEAVA
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=374, Percent_Identity=46.7914438502674, Blast_Score=339, Evalue=2e-94, Organism=Escherichia coli, GI87082077, Length=260, Percent_Identity=31.9230769230769, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788114, Length=202, Percent_Identity=30.1980198019802, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787518, Length=291, Percent_Identity=27.4914089347079, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=265, Percent_Identity=29.0566037735849, Blast_Score=90, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 41824; Mature: 41824
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTASALTGNAEDGEFYFMSSHRSLKAGGVHSRIRTPARGALDPRSAFSLEVAEAFARAR CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH AGGIESPVLMGAIPFDIDQPSELFIPARHAFFDRGERLLAAAQRAGDGGKVVSARSIPDE CCCCCCCEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC QGFKAAVSQAIEQFGRGEIRKAVLSRVLEVDFERPVSAERVFDAVCAQNPNGYQFQLPLA CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEC DGGHLVGVSPELLLQKDGARVRTFPLAGSAKRQGDPAADAAASAKLLDSAKDHYEHSLVI CCCEEEECCHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DDIRDVLAPYCSRLDIPAAPTLLATRAMWHLGSPIDGVLSDPSLPILQLACRLHPTPAIC HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC GFPTQASRQLIREIEPFERGVFSGIVGWCDEHGNGEWAVTIRCATVAQRRVRLFAGAGIV CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCEE AASTPEAEWAETQAKLGTMLGAFGLSGQEAVA EECCCCHHHHHHHHHHHHHHHHCCCCCHHHCC >Mature Secondary Structure MHTASALTGNAEDGEFYFMSSHRSLKAGGVHSRIRTPARGALDPRSAFSLEVAEAFARAR CCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH AGGIESPVLMGAIPFDIDQPSELFIPARHAFFDRGERLLAAAQRAGDGGKVVSARSIPDE CCCCCCCEEEEECCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCC QGFKAAVSQAIEQFGRGEIRKAVLSRVLEVDFERPVSAERVFDAVCAQNPNGYQFQLPLA CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEC DGGHLVGVSPELLLQKDGARVRTFPLAGSAKRQGDPAADAAASAKLLDSAKDHYEHSLVI CCCEEEECCHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DDIRDVLAPYCSRLDIPAAPTLLATRAMWHLGSPIDGVLSDPSLPILQLACRLHPTPAIC HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC GFPTQASRQLIREIEPFERGVFSGIVGWCDEHGNGEWAVTIRCATVAQRRVRLFAGAGIV CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHCCCEE AASTPEAEWAETQAKLGTMLGAFGLSGQEAVA EECCCCHHHHHHHHHHHHHHHHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]