| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496935
Identifier: 34496935
GI number: 34496935
Start: 1577744
End: 1578310
Strand: Direct
Name: 34496935
Synonym: CV_1480
Alternate gene names: NA
Gene position: 1577744-1578310 (Clockwise)
Preceding gene: 34496934
Following gene: 34496947
Centisome position: 33.21
GC content: 47.8
Gene sequence:
>567_bases ATGGAAATCGCCCAAAAGCTCAAAGCAGCCCTATCCACCATCAATGGCACGTTGGCACAGTTGAAGACCGATCTGGCTGA TACAAATGGCCAGATAGGTAGCATCAATGCACGCATTGCAGAGTTCAAGGCCATGCCGATAAGTCTGGGAGACTACAGTC TATACTTAAAGGCATGCATTAATCGCTGCGCCAAAGAACATATTGACCATTTGGAGTTTGAACTATTTCGCAACGCTCCA TCGTTGGGCAGCACGCCCAAAAATAAGGAACCATTTTCTCGGTTTGATTTTGAAAATGGGACGGCCATGTTCCCCAATGG AATGTTTGGAGGGGATGCGCTATCTATTCAGGCCGTCTGCTTTTTCTTTGGGGATCAAATTTACGAGAGTTTCTTGAAGC ATGCGCAGGGGAAGTTTGGAAATCGTTGGGGGAACGAGGAGTTCCCTTCCGTTGAGGAACGGTTCAAGATCATTGCCGAC TTAGAGGCTCAACGGGAAGAGTTGGAACAAAAGCGTCTCCAGCTGGAAGCCCAGATTGATGAAATATCGGGCATGCTGTC ATCCTGA
Upstream 100 bases:
>100_bases ATTATCAGCAAACATGTCCTGCGCTGTCTTACATGGAAGCAGCCACACTTGCCGAGCGAGTGCTGAACTTCTAATCACTA TCTCTAAATAGGTATCTGGT
Downstream 100 bases:
>100_bases GTCGCTGCATGTTGGAACGAAAAAGGCCGCAATGCGGCCTTTTTTGCAATTCCTTTGCAGCTTGTGAAACAATCTCGAAC ACCAATTATCGCGCACAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MEIAQKLKAALSTINGTLAQLKTDLADTNGQIGSINARIAEFKAMPISLGDYSLYLKACINRCAKEHIDHLEFELFRNAP SLGSTPKNKEPFSRFDFENGTAMFPNGMFGGDALSIQAVCFFFGDQIYESFLKHAQGKFGNRWGNEEFPSVEERFKIIAD LEAQREELEQKRLQLEAQIDEISGMLSS
Sequences:
>Translated_188_residues MEIAQKLKAALSTINGTLAQLKTDLADTNGQIGSINARIAEFKAMPISLGDYSLYLKACINRCAKEHIDHLEFELFRNAP SLGSTPKNKEPFSRFDFENGTAMFPNGMFGGDALSIQAVCFFFGDQIYESFLKHAQGKFGNRWGNEEFPSVEERFKIIAD LEAQREELEQKRLQLEAQIDEISGMLSS >Mature_188_residues MEIAQKLKAALSTINGTLAQLKTDLADTNGQIGSINARIAEFKAMPISLGDYSLYLKACINRCAKEHIDHLEFELFRNAP SLGSTPKNKEPFSRFDFENGTAMFPNGMFGGDALSIQAVCFFFGDQIYESFLKHAQGKFGNRWGNEEFPSVEERFKIIAD LEAQREELEQKRLQLEAQIDEISGMLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21067; Mature: 21067
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIAQKLKAALSTINGTLAQLKTDLADTNGQIGSINARIAEFKAMPISLGDYSLYLKACI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH NRCAKEHIDHLEFELFRNAPSLGSTPKNKEPFSRFDFENGTAMFPNGMFGGDALSIQAVC HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCEECCCCCCCCCHHHHHHHH FFFGDQIYESFLKHAQGKFGNRWGNEEFPSVEERFKIIADLEAQREELEQKRLQLEAQID HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISGMLSS HHHHHHCC >Mature Secondary Structure MEIAQKLKAALSTINGTLAQLKTDLADTNGQIGSINARIAEFKAMPISLGDYSLYLKACI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH NRCAKEHIDHLEFELFRNAPSLGSTPKNKEPFSRFDFENGTAMFPNGMFGGDALSIQAVC HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCEECCCCCCCCCHHHHHHHH FFFGDQIYESFLKHAQGKFGNRWGNEEFPSVEERFKIIADLEAQREELEQKRLQLEAQID HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EISGMLSS HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA