| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496934
Identifier: 34496934
GI number: 34496934
Start: 1577109
End: 1577717
Strand: Direct
Name: 34496934
Synonym: CV_1479
Alternate gene names: NA
Gene position: 1577109-1577717 (Clockwise)
Preceding gene: 34496933
Following gene: 34496935
Centisome position: 33.19
GC content: 50.41
Gene sequence:
>609_bases ATGAATAAGCAGCATCGGCTATTTCAAATATTCAAGACGGGTACATTCGGTAGCATGGGTGGCACATCCCTATCTTTCAG CGAGGGTGATTTGCAGATGACTGCCAGCGCCTACAATCCGCAGCGCTATGCCGCGCCGTTGGTTATAGGCCACCCGCAAG ATGATAAGCCCGTCTATGGGAAGGTAACCGGGTTATTTGTCAAAGATGGCGGGCTATATGCCCAAGCCATTTCTGATTCG GCTTTGGAAACACTGGTCAAAGCGGGCCGCTACCGGAAAATATCCGCATCGTTCTTTCCTCCTTGGTCGAGTAACAACCC TACGCCGGGAGCTTACAGCTTAAAGCATGTTGGCTTTCTGGGGGCAATGCCGCCAGCCGTCAAAGGAATGGCCAACCCAG AATTTGCCGAGATGGCAAACTCATTGTGCTTCAGTGAAGGTTTTGAATTATCAAAACCAGCAACAGCAGCTTTTGCGGAA TTCTCCAGTCAATCTTTCGAGCAGGGGCGAGCTGTACATCATCAGCTAACTCTGGATTATCAGCAAACATGTCCTGCGCT GTCTTACATGGAAGCAGCCACACTTGCCGAGCGAGTGCTGAACTTCTAA
Upstream 100 bases:
>100_bases GCACCGTCAGAGTCAAACAACAACAAGAGCAAGAAGAGGAAAAACAAGCCCAGCGAGAAAAGGAGCGTACGCGATGGAAG CGTGAGAACTGGGGTTCGGA
Downstream 100 bases:
>100_bases TCACTATCTCTAAATAGGTATCTGGTATGGAAATCGCCCAAAAGCTCAAAGCAGCCCTATCCACCATCAATGGCACGTTG GCACAGTTGAAGACCGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MNKQHRLFQIFKTGTFGSMGGTSLSFSEGDLQMTASAYNPQRYAAPLVIGHPQDDKPVYGKVTGLFVKDGGLYAQAISDS ALETLVKAGRYRKISASFFPPWSSNNPTPGAYSLKHVGFLGAMPPAVKGMANPEFAEMANSLCFSEGFELSKPATAAFAE FSSQSFEQGRAVHHQLTLDYQQTCPALSYMEAATLAERVLNF
Sequences:
>Translated_202_residues MNKQHRLFQIFKTGTFGSMGGTSLSFSEGDLQMTASAYNPQRYAAPLVIGHPQDDKPVYGKVTGLFVKDGGLYAQAISDS ALETLVKAGRYRKISASFFPPWSSNNPTPGAYSLKHVGFLGAMPPAVKGMANPEFAEMANSLCFSEGFELSKPATAAFAE FSSQSFEQGRAVHHQLTLDYQQTCPALSYMEAATLAERVLNF >Mature_202_residues MNKQHRLFQIFKTGTFGSMGGTSLSFSEGDLQMTASAYNPQRYAAPLVIGHPQDDKPVYGKVTGLFVKDGGLYAQAISDS ALETLVKAGRYRKISASFFPPWSSNNPTPGAYSLKHVGFLGAMPPAVKGMANPEFAEMANSLCFSEGFELSKPATAAFAE FSSQSFEQGRAVHHQLTLDYQQTCPALSYMEAATLAERVLNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21910; Mature: 21910
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQHRLFQIFKTGTFGSMGGTSLSFSEGDLQMTASAYNPQRYAAPLVIGHPQDDKPVYG CCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCHHCCCEEEECCCCCCCEEE KVTGLFVKDGGLYAQAISDSALETLVKAGRYRKISASFFPPWSSNNPTPGAYSLKHVGFL EEEEEEEECCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH GAMPPAVKGMANPEFAEMANSLCFSEGFELSKPATAAFAEFSSQSFEQGRAVHHQLTLDY CCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECH QQTCPALSYMEAATLAERVLNF HHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKQHRLFQIFKTGTFGSMGGTSLSFSEGDLQMTASAYNPQRYAAPLVIGHPQDDKPVYG CCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCCHHCCCEEEECCCCCCCEEE KVTGLFVKDGGLYAQAISDSALETLVKAGRYRKISASFFPPWSSNNPTPGAYSLKHVGFL EEEEEEEECCCEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHH GAMPPAVKGMANPEFAEMANSLCFSEGFELSKPATAAFAEFSSQSFEQGRAVHHQLTLDY CCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECH QQTCPALSYMEAATLAERVLNF HHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA