| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496929
Identifier: 34496929
GI number: 34496929
Start: 1571130
End: 1573856
Strand: Direct
Name: 34496929
Synonym: CV_1474
Alternate gene names: NA
Gene position: 1571130-1573856 (Clockwise)
Preceding gene: 34496928
Following gene: 34496930
Centisome position: 33.07
GC content: 57.76
Gene sequence:
>2727_bases ATGGACAAAAACCTCGCGGTATCCATCAGCATTGGCGCGCATGCGGCATCGGCGCTTGCGGCATTTGGCAACGTCAAGCA AAGCTTGGCCGGCATAGGACAAGCCACATCCATGCTCAAGGCAAAGCAAAATGAGCTGGGAAGCGCCATTCAACGGCAAA TGGGAACGCTGGCTCCAAAGACCCTTGCCGCGATGAACCATGATTATGAAAAGCTGGGCCGTGCCATTGATAGTTTGCGG CTGAAACAAGAGAAACTCGCCTCCAGCATGGCGCGCGGTGAAACGCTGAAGGGCCGCCGTCAAGAGCATTGGTCCGGTCT TCGGGAAAGTGCTGCGACAGCCGCCGCTGTCGCCTTGCCTGTTGGAAAGTCGGTCCAGCTGTCCGCATCCTATCAAGACG CCATCAAGGATATTGCCATTACCGGTGACCTCGCGCCAGCCGCTGAAGCGGCGTTAGGCCAATCGGTGCGAGCGGCGGCC CTGCGTTTCAATCAATCTCAATTCGAAATCGCCAAGGGCGTCGGCATCCTGATCGCGGAAGGCATGAGCCCGGACAAAGC CTCCAGTCAAATCGGCCTGCTGGCCAAATTCACCACTGCCACTCGCGCGGCCATGGCAGATGCCGCGCGCATGAATGTCG CATTTGATCAATTGGGGGTGAAAGACAAAGAGCTGGCATTCAATCAAGCCACCAAGGCGGGGAAGCAGGGTTCATTTGAA ATTCGGGATATGGCGAAATGGTTTCCCGATTTGGGCGGCATGATGAAGTCTATTGGCGTAGAGGGGAATGAGGCGGTGGT CAACATGGCCAGCCGCCTGCAAATTGCCAGACGAACGGCAGGCAATAATGATGAAGCGGCAAATAACTTTAAGAATTTCC TTTCTAAACTCACATCGCCAGATACGCTGAATGATTTTGCAAAGGTAAATATCGATCTGCAAGGCAGTTTGTTGCGCTTG GCACGTCAAGGGCTGGACCCAGTAGAGGGCGCGGTGGGCGCGATCATGGATAAAATGCGCCAATCATCGCCCCAGGCGGT AAAAGAGTTGGAGAAATTATCGGCGGAGCTGGCCGCTATCAAAGACCCTACCGAGCGCGCCGCCGAAATGGCGCGGCGAC GCACCATGATTGAAGCCATCGGCAATCGCGCAGGGCTGAGCAGCATGTTCCAGGACATGCAGGCCATGAGCTATCTGCTC GCCGAAGTGCAAAACCGCAGCGACCTCAAGAAAATCCAAGAGGAGGTTAAAACCGGCAAAGGTAAAAGCGGTCAATCGCA GATTGACGAAGACTTTGCCAAGCGCATGCAAGGGGCCAGCGAGCAATTCAAACAGCTCAAGATCGGCTTGACGGACATCG GCATTACCATCGGTGATGCCTTGCTCCCCAGCCTTGTGAGCGCGGTGGACGCCATCAAACCCGGCGTCAAAGCATTTGGA GACTGGGCCAAACAGAATCCAGGCTTGTTAAAGGGCATTATCGGCGTGGTCGGCGGGCTCACACTTTTACGAACGGCCAT GTTCAGCCTTAAACTACTGGGCAACCTGATGTTTTTGGCGCCCAGTAATTCGATATTCACCCGCTGGATGAGCCTGACCA GCAGAATCACCACCCTCCGCGCGCTGCTGGCGGGCGGCATGCCGCGTTTGCCCTTGGCGCTCCCTCGTGTGGCAACAAGC GGCATCGCCAACCTTGCGCCCCGCTTGTTGGTGGGCTTCCAAGCCGTCCTGCCTTGGATTGGCAGGGTGGGCATGATGCT GCTGCGGTTGTCGCCGATCGGCCTGGTGCTCTCGACCGTGGGCCTGGTGGTGTACAAGTATTGGAAGCCGATCAAAGGCT TCTTTGTCGGACTGTGGCAAGGTCTGTCCAGCGTGGCCGGGCCGGCCATCAAGTCGCTCATCCAGTCGGTTATCGGGTTT GGAACATCCATTGGGCGGCTGCTCCTCTCCATTCCAGGCGTAGGCTTTGCCTTCCGGGCAATCAGCACCATCGCGGCCCC GCTGTTCTCTATGTTGGTTAACGGCGTGAAAGCCGTATGGAACTGGTTTGCCAACCTGCTCGAACCCGTGGACGACGTAG GGGGCAAAGCGCAGAACATGGGCCAAAAGGTCGGCGTGGTGCTGGGTGGCATCGTCAAGGGACTGATTGATTTGCCAACC AAGTTCATCAAACTGGGAACGGATTTAGTCGATGGCCTGGTCAACGGTATTCGGGCCAGGATCGGCAGCGCCGTCCAAGT CGTGGAGGAACTGGGGAATAGCGCCATCGGCAAATTCAAGTCTGCGCTGGGCATCAAGTCCCCTTCGCGGGTGTTTATGG GGTTCGGTGACAATATTGCTCAGGGCACGGCAATCGGTGTCGCCCGCACGGCGGGTGTCGTCGCTACGGCCACGGCAGGT ATGGCGTTGGCCACCACCACCGCGTGGGGCAAACCCACATTGCCGCCGCCTTCCGTTGGCAAGCGCCCGGCCATCACGCA GCAAGCCCAGCTGGCCGCCGTCGTACAAGCTGGCGCAGGCGCGTCAGCGCCCAATGCGTCCCGCCAGATGGCCAGCCCCG CCGCAACGGGCAATGTCACCGTTAACTTGTATCAAACCTTCCATATCGACGGCGGAGGCAAGAACGTCAAAGAGCAGATT CTGCAGGCAACACAGCTAACAGTCCGGGAGCTGGAAAAAATGATGGAGCAGGTCTACGCCCGCCAGCAGCGGCGAGCATT CAACTAA
Upstream 100 bases:
>100_bases CGAGTCTGGAAAGCCCACAACCAGGAATAGGCTAAATCGTTCACGCACAACTTTGCCGCCATCGTTAATCGCTGGCGGCA TTTTTCATATAGGCGGCACC
Downstream 100 bases:
>100_bases GCGTTTCACTCCTTCAGATGGCCGCCGGCTTGGCGGCCATTTCGCATTCCTTGCGCCCCTCCAGGCTCGCCGCCGTTTTG GAATTCACGCATTCCAGCCG
Product: bacteriophage protein
Products: NA
Alternate protein names: Bacteriophage Protein; Phage Tail Protein; Phage Tail Tape Measure Core Region; Pyocin R2_PP Tail Length Determination Protein; Bacteriophage Tail Protein; Prophage; Tail Tape Meausure Protein; Phage-Related Tail Protein; Phage-Related Tail Transmembrane Protein; Phage TMP Domain-Containing Protein; Phage Minor Tail Protein; Tail Tape Measure Protein; Phage Tail Tape-Measure Protein; Phage Tail Length Determination Protein; Bacteriophage P2 Tail Protein GPT; Bacteriophage Protein; Tail Tape Measure Core Region; Phage Tail Tape Measure Protein Core Region
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MDKNLAVSISIGAHAASALAAFGNVKQSLAGIGQATSMLKAKQNELGSAIQRQMGTLAPKTLAAMNHDYEKLGRAIDSLR LKQEKLASSMARGETLKGRRQEHWSGLRESAATAAAVALPVGKSVQLSASYQDAIKDIAITGDLAPAAEAALGQSVRAAA LRFNQSQFEIAKGVGILIAEGMSPDKASSQIGLLAKFTTATRAAMADAARMNVAFDQLGVKDKELAFNQATKAGKQGSFE IRDMAKWFPDLGGMMKSIGVEGNEAVVNMASRLQIARRTAGNNDEAANNFKNFLSKLTSPDTLNDFAKVNIDLQGSLLRL ARQGLDPVEGAVGAIMDKMRQSSPQAVKELEKLSAELAAIKDPTERAAEMARRRTMIEAIGNRAGLSSMFQDMQAMSYLL AEVQNRSDLKKIQEEVKTGKGKSGQSQIDEDFAKRMQGASEQFKQLKIGLTDIGITIGDALLPSLVSAVDAIKPGVKAFG DWAKQNPGLLKGIIGVVGGLTLLRTAMFSLKLLGNLMFLAPSNSIFTRWMSLTSRITTLRALLAGGMPRLPLALPRVATS GIANLAPRLLVGFQAVLPWIGRVGMMLLRLSPIGLVLSTVGLVVYKYWKPIKGFFVGLWQGLSSVAGPAIKSLIQSVIGF GTSIGRLLLSIPGVGFAFRAISTIAAPLFSMLVNGVKAVWNWFANLLEPVDDVGGKAQNMGQKVGVVLGGIVKGLIDLPT KFIKLGTDLVDGLVNGIRARIGSAVQVVEELGNSAIGKFKSALGIKSPSRVFMGFGDNIAQGTAIGVARTAGVVATATAG MALATTTAWGKPTLPPPSVGKRPAITQQAQLAAVVQAGAGASAPNASRQMASPAATGNVTVNLYQTFHIDGGGKNVKEQI LQATQLTVRELEKMMEQVYARQQRRAFN
Sequences:
>Translated_908_residues MDKNLAVSISIGAHAASALAAFGNVKQSLAGIGQATSMLKAKQNELGSAIQRQMGTLAPKTLAAMNHDYEKLGRAIDSLR LKQEKLASSMARGETLKGRRQEHWSGLRESAATAAAVALPVGKSVQLSASYQDAIKDIAITGDLAPAAEAALGQSVRAAA LRFNQSQFEIAKGVGILIAEGMSPDKASSQIGLLAKFTTATRAAMADAARMNVAFDQLGVKDKELAFNQATKAGKQGSFE IRDMAKWFPDLGGMMKSIGVEGNEAVVNMASRLQIARRTAGNNDEAANNFKNFLSKLTSPDTLNDFAKVNIDLQGSLLRL ARQGLDPVEGAVGAIMDKMRQSSPQAVKELEKLSAELAAIKDPTERAAEMARRRTMIEAIGNRAGLSSMFQDMQAMSYLL AEVQNRSDLKKIQEEVKTGKGKSGQSQIDEDFAKRMQGASEQFKQLKIGLTDIGITIGDALLPSLVSAVDAIKPGVKAFG DWAKQNPGLLKGIIGVVGGLTLLRTAMFSLKLLGNLMFLAPSNSIFTRWMSLTSRITTLRALLAGGMPRLPLALPRVATS GIANLAPRLLVGFQAVLPWIGRVGMMLLRLSPIGLVLSTVGLVVYKYWKPIKGFFVGLWQGLSSVAGPAIKSLIQSVIGF GTSIGRLLLSIPGVGFAFRAISTIAAPLFSMLVNGVKAVWNWFANLLEPVDDVGGKAQNMGQKVGVVLGGIVKGLIDLPT KFIKLGTDLVDGLVNGIRARIGSAVQVVEELGNSAIGKFKSALGIKSPSRVFMGFGDNIAQGTAIGVARTAGVVATATAG MALATTTAWGKPTLPPPSVGKRPAITQQAQLAAVVQAGAGASAPNASRQMASPAATGNVTVNLYQTFHIDGGGKNVKEQI LQATQLTVRELEKMMEQVYARQQRRAFN >Mature_908_residues MDKNLAVSISIGAHAASALAAFGNVKQSLAGIGQATSMLKAKQNELGSAIQRQMGTLAPKTLAAMNHDYEKLGRAIDSLR LKQEKLASSMARGETLKGRRQEHWSGLRESAATAAAVALPVGKSVQLSASYQDAIKDIAITGDLAPAAEAALGQSVRAAA LRFNQSQFEIAKGVGILIAEGMSPDKASSQIGLLAKFTTATRAAMADAARMNVAFDQLGVKDKELAFNQATKAGKQGSFE IRDMAKWFPDLGGMMKSIGVEGNEAVVNMASRLQIARRTAGNNDEAANNFKNFLSKLTSPDTLNDFAKVNIDLQGSLLRL ARQGLDPVEGAVGAIMDKMRQSSPQAVKELEKLSAELAAIKDPTERAAEMARRRTMIEAIGNRAGLSSMFQDMQAMSYLL AEVQNRSDLKKIQEEVKTGKGKSGQSQIDEDFAKRMQGASEQFKQLKIGLTDIGITIGDALLPSLVSAVDAIKPGVKAFG DWAKQNPGLLKGIIGVVGGLTLLRTAMFSLKLLGNLMFLAPSNSIFTRWMSLTSRITTLRALLAGGMPRLPLALPRVATS GIANLAPRLLVGFQAVLPWIGRVGMMLLRLSPIGLVLSTVGLVVYKYWKPIKGFFVGLWQGLSSVAGPAIKSLIQSVIGF GTSIGRLLLSIPGVGFAFRAISTIAAPLFSMLVNGVKAVWNWFANLLEPVDDVGGKAQNMGQKVGVVLGGIVKGLIDLPT KFIKLGTDLVDGLVNGIRARIGSAVQVVEELGNSAIGKFKSALGIKSPSRVFMGFGDNIAQGTAIGVARTAGVVATATAG MALATTTAWGKPTLPPPSVGKRPAITQQAQLAAVVQAGAGASAPNASRQMASPAATGNVTVNLYQTFHIDGGGKNVKEQI LQATQLTVRELEKMMEQVYARQQRRAFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95939; Mature: 95939
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNLAVSISIGAHAASALAAFGNVKQSLAGIGQATSMLKAKQNELGSAIQRQMGTLAPK CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TLAAMNHDYEKLGRAIDSLRLKQEKLASSMARGETLKGRRQEHWSGLRESAATAAAVALP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCC VGKSVQLSASYQDAIKDIAITGDLAPAAEAALGQSVRAAALRFNQSQFEIAKGVGILIAE CCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEC GMSPDKASSQIGLLAKFTTATRAAMADAARMNVAFDQLGVKDKELAFNQATKAGKQGSFE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH IRDMAKWFPDLGGMMKSIGVEGNEAVVNMASRLQIARRTAGNNDEAANNFKNFLSKLTSP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC DTLNDFAKVNIDLQGSLLRLARQGLDPVEGAVGAIMDKMRQSSPQAVKELEKLSAELAAI CCCCHHHHEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KDPTERAAEMARRRTMIEAIGNRAGLSSMFQDMQAMSYLLAEVQNRSDLKKIQEEVKTGK CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC GKSGQSQIDEDFAKRMQGASEQFKQLKIGLTDIGITIGDALLPSLVSAVDAIKPGVKAFG CCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DWAKQNPGLLKGIIGVVGGLTLLRTAMFSLKLLGNLMFLAPSNSIFTRWMSLTSRITTLR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHH ALLAGGMPRLPLALPRVATSGIANLAPRLLVGFQAVLPWIGRVGMMLLRLSPIGLVLSTV HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVVYKYWKPIKGFFVGLWQGLSSVAGPAIKSLIQSVIGFGTSIGRLLLSIPGVGFAFRA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH ISTIAAPLFSMLVNGVKAVWNWFANLLEPVDDVGGKAQNMGQKVGVVLGGIVKGLIDLPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KFIKLGTDLVDGLVNGIRARIGSAVQVVEELGNSAIGKFKSALGIKSPSRVFMGFGDNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCHH QGTAIGVARTAGVVATATAGMALATTTAWGKPTLPPPSVGKRPAITQQAQLAAVVQAGAG CCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC ASAPNASRQMASPAATGNVTVNLYQTFHIDGGGKNVKEQILQATQLTVRELEKMMEQVYA CCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RQQRRAFN HHHHHCCC >Mature Secondary Structure MDKNLAVSISIGAHAASALAAFGNVKQSLAGIGQATSMLKAKQNELGSAIQRQMGTLAPK CCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TLAAMNHDYEKLGRAIDSLRLKQEKLASSMARGETLKGRRQEHWSGLRESAATAAAVALP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHCC VGKSVQLSASYQDAIKDIAITGDLAPAAEAALGQSVRAAALRFNQSQFEIAKGVGILIAE CCCCEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEC GMSPDKASSQIGLLAKFTTATRAAMADAARMNVAFDQLGVKDKELAFNQATKAGKQGSFE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCH IRDMAKWFPDLGGMMKSIGVEGNEAVVNMASRLQIARRTAGNNDEAANNFKNFLSKLTSP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC DTLNDFAKVNIDLQGSLLRLARQGLDPVEGAVGAIMDKMRQSSPQAVKELEKLSAELAAI CCCCHHHHEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KDPTERAAEMARRRTMIEAIGNRAGLSSMFQDMQAMSYLLAEVQNRSDLKKIQEEVKTGK CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC GKSGQSQIDEDFAKRMQGASEQFKQLKIGLTDIGITIGDALLPSLVSAVDAIKPGVKAFG CCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH DWAKQNPGLLKGIIGVVGGLTLLRTAMFSLKLLGNLMFLAPSNSIFTRWMSLTSRITTLR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHH ALLAGGMPRLPLALPRVATSGIANLAPRLLVGFQAVLPWIGRVGMMLLRLSPIGLVLSTV HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVVYKYWKPIKGFFVGLWQGLSSVAGPAIKSLIQSVIGFGTSIGRLLLSIPGVGFAFRA HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH ISTIAAPLFSMLVNGVKAVWNWFANLLEPVDDVGGKAQNMGQKVGVVLGGIVKGLIDLPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KFIKLGTDLVDGLVNGIRARIGSAVQVVEELGNSAIGKFKSALGIKSPSRVFMGFGDNIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCHH QGTAIGVARTAGVVATATAGMALATTTAWGKPTLPPPSVGKRPAITQQAQLAAVVQAGAG CCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC ASAPNASRQMASPAATGNVTVNLYQTFHIDGGGKNVKEQILQATQLTVRELEKMMEQVYA CCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RQQRRAFN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA