Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34496925

Identifier: 34496925

GI number: 34496925

Start: 1564087

End: 1565925

Strand: Reverse

Name: 34496925

Synonym: CV_1470

Alternate gene names: NA

Gene position: 1565925-1564087 (Counterclockwise)

Preceding gene: 34496926

Following gene: 34496924

Centisome position: 32.96

GC content: 63.78

Gene sequence:

>1839_bases
TTGAGCGGTAATTTTGTCGACAAAAATGTCGGCAATGGCAAAACGATAACGCTGAATTCAACCCCGACGCTGGCAGGCGC
CAACGCCGGCAACTATTTGCTGGCCCCCTATGTCGTCAACGCTTTCAGCGCCAACATCACCCCGCTGGCCATCACGGTTA
GCGCCACCGGGCAGAACAAGACCTATGACGGCACCGTCCACGATACCGTGACGCTGTCCAGCAGCGGCGTGCTGGCCGGC
GATACCGTCAACTTCTCCGACACCAGCGCCACCTTCGCCAACAAGAACGTCGGCAACGCCAAAACCGTCTCGGTATCGGG
CATCTCCGCCAGCGGCGCCGACGCCGGCAACTACACCATCAATAGCACCACCACCACCAGCGCCAACATCACGCCGCTGG
CCATTACTGTTAGCGCCACCGGACAGAACAAGACCTACGACGCGACCGTCAACGACGCCGTGACGCTGTCCAGCAGCGGC
GTGCTGGCCGGCGATGCCGTCAACTTCTCCGACACCAGCGCCACCTTCGCCAACAAGAACGTCGGCAACGCCAAAACCGT
CTCGGTATCGGGCATATCCGCCAGCGGCGCCGACGCCGGCAACTACACGCTCAACAACAGCACCGCCACCACCAGCGCCA
ACATCACCCCGCTGGCCATCACCGTTAACGCCACCGGGCAGAACAAGACTTATGACGCCACCGTCAACGCCAGCGTCACG
CTGAGCAGCAGCGGCGTGCTGGCCGGCGATACCGTCAACTTCGCCGATACCAGCGCCGCCTTCAACAACAAGAACGTCGG
CAATGCCAAGCCGGTATCGGTGGCCGGCATCTCCGCCAGCGGCGCCGACGCCGGCAACTACACGCTCAACAACAACACCG
CCACCACCAGCGCCAACATCACCCCGCTGGCCATCACCGTTAACGCCGCCGGGCAGAACAAGACCTATGACGGCACCGTC
AACGATACCGTGACGCTGTCCAGTAGCGGCGTGCTGGCCGGCGATACCGTCAACTTCTCCGACACCAGCGCCACCTTCGC
CAACAAGAACGTCGGCAACGCCAAAACCGTCTCGGTATCGGGCATCTCCGCCAGCGGCGCCGACGCCGGCAACTACACCA
TCAATAGCACCGCCACCACCAGCGCCAACATCGCCCCGCTGGCCATTACCGTCTCTGCCACCGGGCAGAACAAGACTTAT
GACGCCACCGTCAACGGCGCCGTGACGCTGTCCAGCAGCGGCGTGCTGGCCGGCGATGCCGTCAGCTTCTCCGACACCAG
CGCCACCTTCAACAACAAGAACATCGGCACCGCCAAGCCGGTGTCGGTAACTGGCATCTCCGCCAGCGGCGCCGACGCCG
GCAACTACACGCTCAACAACAGCACCGCCACCACCAGCGCCAACATCACGCCTCTGGCGCTCAGCGTCAACGGCGCGGGC
GCCTTCGACAAACTGTATGACGGCACCAATGCCGCCACCTTGTATGGCAGCATCGGCACCCTCGGCAGCGACGCCGTGAC
GTTGAGCGGCAATGGCACATTCGCCAGCGCCCACGTCGCCCATGACGGCAGCGGCAACGTCATCGCTCAGAGCGTCGCCG
CCAACTACGCCATCAGCGGCGCGGATGCCGGCAATTACACATTGACGCAGCCTACCGGGCTGGCCGCCGCCATCAGGCCG
GTTACCGTCACCGCCAATATCAGCGCCGCCAATAAAACCTATGACGGCACCACCAGCGCGACCCTGACCAGTCAGGCACC
ATCAACGGCGAAACCCTGGCCCTCAACGCCGCCGCCGCCAACTTCGACACCAAGGACGCCGGCACCGGCAAGACCGTGA

Upstream 100 bases:

>100_bases
CTCCGCCAGCAACAAGGTCTATGACGGCACCGCCGCGGCCAGCGGCATCACCGCCAACCTGGCGGGGATCCTACCCGGAC
AAACCGTCGGCCTCTCTTCC

Downstream 100 bases:

>100_bases
CAGCCAGCGGCCTGACGCTGAGCAATGGCACGGGCCTCGCCAGCGACTACGCGCTGCAAAGCAACACCGCAGCCACCACC
GCCAACATCAATCAGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion; The GLUG Motif Domain Protein; Alpha Beta-Propellor Repeat-Containing Integrin; Filamentous Hemagglutinin Outer Membrane Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein; Large Exoproteins Involved In Heme Utilization Or Adhesion; Heme/Hemopexin Utilization Protein HuxA; Ig Family Protein; Hemagglutination Activity Domain Protein

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MSGNFVDKNVGNGKTITLNSTPTLAGANAGNYLLAPYVVNAFSANITPLAITVSATGQNKTYDGTVHDTVTLSSSGVLAG
DTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTINSTTTTSANITPLAITVSATGQNKTYDATVNDAVTLSSSG
VLAGDAVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTLNNSTATTSANITPLAITVNATGQNKTYDATVNASVT
LSSSGVLAGDTVNFADTSAAFNNKNVGNAKPVSVAGISASGADAGNYTLNNNTATTSANITPLAITVNAAGQNKTYDGTV
NDTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTINSTATTSANIAPLAITVSATGQNKTY
DATVNGAVTLSSSGVLAGDAVSFSDTSATFNNKNIGTAKPVSVTGISASGADAGNYTLNNSTATTSANITPLALSVNGAG
AFDKLYDGTNAATLYGSIGTLGSDAVTLSGNGTFASAHVAHDGSGNVIAQSVAANYAISGADAGNYTLTQPTGLAAAIRP
VTVTANISAANKTYDGTTSATLTSQAPSTAKPWPSTPPPPTSTPRTPAPARP

Sequences:

>Translated_612_residues
MSGNFVDKNVGNGKTITLNSTPTLAGANAGNYLLAPYVVNAFSANITPLAITVSATGQNKTYDGTVHDTVTLSSSGVLAG
DTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTINSTTTTSANITPLAITVSATGQNKTYDATVNDAVTLSSSG
VLAGDAVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTLNNSTATTSANITPLAITVNATGQNKTYDATVNASVT
LSSSGVLAGDTVNFADTSAAFNNKNVGNAKPVSVAGISASGADAGNYTLNNNTATTSANITPLAITVNAAGQNKTYDGTV
NDTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTINSTATTSANIAPLAITVSATGQNKTY
DATVNGAVTLSSSGVLAGDAVSFSDTSATFNNKNIGTAKPVSVTGISASGADAGNYTLNNSTATTSANITPLALSVNGAG
AFDKLYDGTNAATLYGSIGTLGSDAVTLSGNGTFASAHVAHDGSGNVIAQSVAANYAISGADAGNYTLTQPTGLAAAIRP
VTVTANISAANKTYDGTTSATLTSQAPSTAKPWPSTPPPPTSTPRTPAPARP
>Mature_611_residues
SGNFVDKNVGNGKTITLNSTPTLAGANAGNYLLAPYVVNAFSANITPLAITVSATGQNKTYDGTVHDTVTLSSSGVLAGD
TVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTINSTTTTSANITPLAITVSATGQNKTYDATVNDAVTLSSSGV
LAGDAVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTLNNSTATTSANITPLAITVNATGQNKTYDATVNASVTL
SSSGVLAGDTVNFADTSAAFNNKNVGNAKPVSVAGISASGADAGNYTLNNNTATTSANITPLAITVNAAGQNKTYDGTVN
DTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTINSTATTSANIAPLAITVSATGQNKTYD
ATVNGAVTLSSSGVLAGDAVSFSDTSATFNNKNIGTAKPVSVTGISASGADAGNYTLNNSTATTSANITPLALSVNGAGA
FDKLYDGTNAATLYGSIGTLGSDAVTLSGNGTFASAHVAHDGSGNVIAQSVAANYAISGADAGNYTLTQPTGLAAAIRPV
TVTANISAANKTYDGTTSATLTSQAPSTAKPWPSTPPPPTSTPRTPAPARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60055; Mature: 59924

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNFVDKNVGNGKTITLNSTPTLAGANAGNYLLAPYVVNAFSANITPLAITVSATGQNK
CCCCEECCCCCCCCEEEECCCCCEECCCCCCEEEECEEEEHHCCCCEEEEEEEEECCCCC
TYDGTVHDTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTI
EECCEEEEEEEECCCCEEECCEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCEEE
NSTTTTSANITPLAITVSATGQNKTYDATVNDAVTLSSSGVLAGDAVNFSDTSATFANKN
CCEEECCCCCEEEEEEEEECCCCCEEEEECCCEEEEECCCEEEECEECCCCCCCEECCCC
VGNAKTVSVSGISASGADAGNYTLNNSTATTSANITPLAITVNATGQNKTYDATVNASVT
CCCEEEEEEECCCCCCCCCCCEEECCCCEECCCCCEEEEEEEECCCCCCEEEEEEEEEEE
LSSSGVLAGDTVNFADTSAAFNNKNVGNAKPVSVAGISASGADAGNYTLNNNTATTSANI
EECCCEEECCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEEEECCC
TPLAITVNAAGQNKTYDGTVNDTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVS
EEEEEEEECCCCCCEECCCCCCEEEEECCCEEECCEECCCCCCCEECCCCCCCEEEEEEE
GISASGADAGNYTINSTATTSANIAPLAITVSATGQNKTYDATVNGAVTLSSSGVLAGDA
CCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEECEEEEEECCCEEECCE
VSFSDTSATFNNKNIGTAKPVSVTGISASGADAGNYTLNNSTATTSANITPLALSVNGAG
EEECCCCCEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEECCCCCEEEEEEECCCC
AFDKLYDGTNAATLYGSIGTLGSDAVTLSGNGTFASAHVAHDGSGNVIAQSVAANYAISG
CHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEC
ADAGNYTLTQPTGLAAAIRPVTVTANISAANKTYDGTTSATLTSQAPSTAKPWPSTPPPP
CCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
TSTPRTPAPARP
CCCCCCCCCCCC
>Mature Secondary Structure 
SGNFVDKNVGNGKTITLNSTPTLAGANAGNYLLAPYVVNAFSANITPLAITVSATGQNK
CCCEECCCCCCCCEEEECCCCCEECCCCCCEEEECEEEEHHCCCCEEEEEEEEECCCCC
TYDGTVHDTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVSGISASGADAGNYTI
EECCEEEEEEEECCCCEEECCEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCEEE
NSTTTTSANITPLAITVSATGQNKTYDATVNDAVTLSSSGVLAGDAVNFSDTSATFANKN
CCEEECCCCCEEEEEEEEECCCCCEEEEECCCEEEEECCCEEEECEECCCCCCCEECCCC
VGNAKTVSVSGISASGADAGNYTLNNSTATTSANITPLAITVNATGQNKTYDATVNASVT
CCCEEEEEEECCCCCCCCCCCEEECCCCEECCCCCEEEEEEEECCCCCCEEEEEEEEEEE
LSSSGVLAGDTVNFADTSAAFNNKNVGNAKPVSVAGISASGADAGNYTLNNNTATTSANI
EECCCEEECCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCEEEEECCC
TPLAITVNAAGQNKTYDGTVNDTVTLSSSGVLAGDTVNFSDTSATFANKNVGNAKTVSVS
EEEEEEEECCCCCCEECCCCCCEEEEECCCEEECCEECCCCCCCEECCCCCCCEEEEEEE
GISASGADAGNYTINSTATTSANIAPLAITVSATGQNKTYDATVNGAVTLSSSGVLAGDA
CCCCCCCCCCCEEECCCCCCCCCEEEEEEEEEECCCCCEEEEEECEEEEEECCCEEECCE
VSFSDTSATFNNKNIGTAKPVSVTGISASGADAGNYTLNNSTATTSANITPLALSVNGAG
EEECCCCCEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEECCCCCEEEEEEECCCC
AFDKLYDGTNAATLYGSIGTLGSDAVTLSGNGTFASAHVAHDGSGNVIAQSVAANYAISG
CHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEEECCCEEEEC
ADAGNYTLTQPTGLAAAIRPVTVTANISAANKTYDGTTSATLTSQAPSTAKPWPSTPPPP
CCCCCEEEECCCCCEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC
TSTPRTPAPARP
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA