| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496897
Identifier: 34496897
GI number: 34496897
Start: 1525800
End: 1526354
Strand: Direct
Name: 34496897
Synonym: CV_1442
Alternate gene names: NA
Gene position: 1525800-1526354 (Clockwise)
Preceding gene: 34496894
Following gene: 34496900
Centisome position: 32.11
GC content: 67.03
Gene sequence:
>555_bases GTGGGAACGCTGGAAGAGATTCTGCTGGAGCTGAGCCGCGGCGAGGGCTTGCCGGATTCGGCGGTGCTGGACATGATCGC GGTGCAGCGCAGCCTGCACCCGCGCGCCAGCCTGCTGTACTGGGCGGTGGTCGATTACGGCCGTCCGTCCACCGAGGGGC GGCTGTTCGTGTTCGACACGCTGGAGGCCAGCGTGCAGCGCTTCCTGGTCGCGCATGGGCGCGACGCCGACGCCAATCTG CTGCGGGCCGGCACCTTTTCCAACGAGCCGGGCTCCGATGCCTCCAGCCTGGGCGTGTGCCGCGCGTCCGAGACCTATTT CGGCAGCCAGGGCCTGTCCTTGTGGCTGGATGGGCTGGAGCGCAGCAATTCCAATATGCGCCGGCGCAATCTGGTGATGT ACGGCTCTCCCCAGGTGACGCCGCAATACATGGCCGAACACGGCATCCTCTGGCGGTCCGACGGCAGCCTGGCCGTGGAG CCGCAATACAGCGTCGGCCTGATCAACATGCTGCAGGGCGGTTCCTACATCAACTGCATCCGCAGCCGCCGCTGA
Upstream 100 bases:
>100_bases TCATTCGGGCCTGCCTAGGATGAACTGTCCGCCGGCTCGCATTCGGCTGGGGCGGGCAGGGACAAGATGCGGCCCGCGCA ACCGCAGGCAAGGATGGGAT
Downstream 100 bases:
>100_bases CGCGGCGCCGAGCCGCGGAGCGGCCCGGCGCCCGGTTACGCTATGCCGTCGCTAGGCGGCGGGAAGCGGCGCTCAGCATT GCACCTGCAAATGGAAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MGTLEEILLELSRGEGLPDSAVLDMIAVQRSLHPRASLLYWAVVDYGRPSTEGRLFVFDTLEASVQRFLVAHGRDADANL LRAGTFSNEPGSDASSLGVCRASETYFGSQGLSLWLDGLERSNSNMRRRNLVMYGSPQVTPQYMAEHGILWRSDGSLAVE PQYSVGLINMLQGGSYINCIRSRR
Sequences:
>Translated_184_residues MGTLEEILLELSRGEGLPDSAVLDMIAVQRSLHPRASLLYWAVVDYGRPSTEGRLFVFDTLEASVQRFLVAHGRDADANL LRAGTFSNEPGSDASSLGVCRASETYFGSQGLSLWLDGLERSNSNMRRRNLVMYGSPQVTPQYMAEHGILWRSDGSLAVE PQYSVGLINMLQGGSYINCIRSRR >Mature_183_residues GTLEEILLELSRGEGLPDSAVLDMIAVQRSLHPRASLLYWAVVDYGRPSTEGRLFVFDTLEASVQRFLVAHGRDADANLL RAGTFSNEPGSDASSLGVCRASETYFGSQGLSLWLDGLERSNSNMRRRNLVMYGSPQVTPQYMAEHGILWRSDGSLAVEP QYSVGLINMLQGGSYINCIRSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20317; Mature: 20186
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLEEILLELSRGEGLPDSAVLDMIAVQRSLHPRASLLYWAVVDYGRPSTEGRLFVFDT CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCEEEEEEC LEASVQRFLVAHGRDADANLLRAGTFSNEPGSDASSLGVCRASETYFGSQGLSLWLDGLE HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCEEEECCCCCCCCCCHHHHHHHHH RSNSNMRRRNLVMYGSPQVTPQYMAEHGILWRSDGSLAVEPQYSVGLINMLQGGSYINCI CCCCCCCCCEEEEECCCCCCHHHHHHCCCEEECCCCEEECCCCCCHHHHHHCCCCHHHHH RSRR CCCC >Mature Secondary Structure GTLEEILLELSRGEGLPDSAVLDMIAVQRSLHPRASLLYWAVVDYGRPSTEGRLFVFDT CCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCCCEEEEEEC LEASVQRFLVAHGRDADANLLRAGTFSNEPGSDASSLGVCRASETYFGSQGLSLWLDGLE HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHCEEEECCCCCCCCCCHHHHHHHHH RSNSNMRRRNLVMYGSPQVTPQYMAEHGILWRSDGSLAVEPQYSVGLINMLQGGSYINCI CCCCCCCCCEEEEECCCCCCHHHHHHCCCEEECCCCEEECCCCCCHHHHHHCCCCHHHHH RSRR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA