| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496858
Identifier: 34496858
GI number: 34496858
Start: 1477509
End: 1478867
Strand: Reverse
Name: 34496858
Synonym: CV_1403
Alternate gene names: NA
Gene position: 1478867-1477509 (Counterclockwise)
Preceding gene: 34496859
Following gene: 34496857
Centisome position: 31.13
GC content: 69.02
Gene sequence:
>1359_bases ATGACTACGTCCCCAACTGAAAACGCCCACGCGGTGGTGCTGGGCGGCAGCGTCGCCGGCTGCCTGGCGGCGGCCGTGCT GGCCCGCCGCTATCCGCGCGTGACCATCGTGGAAAAAAGCGACTTCCACAACGAAACCGGCGCGCGCCAGAGCGTGCCGC AGGAACACCACGTCCACCTGCTGCTGCAGCGCGGCAAGGACATCATGGAAGCCATCTTCCCTGGCTTCCTGTCCGAACTG GAGCAGGCCGGCGCGCTGGTGGCCGACCTGGGCCACGACGTCAAGTGGTACCAGGCCGGCCGCTGGAAAAACCGTTATCG CTGCGGCATCCACGCCCACTACTGCAGCCGCCGGCTGATCGACACCCATCTGCGCCGCCGCGTCGCGCGGCTGCCGCAGG TGACGGTGCTGTCGCGCACCCAGATGGAAGGCCTGGACTTCCGCCGAGACGGCGACAGGCTGGCGGTCGGCGGCGTCCGG CTGCGCAACGACGACCATGCCTGGACGCTGGACGCCGACGCGCTGGTGGACGCCAGCGGCCGCGGCACCCGCCTGCCCGG CTGGCTGGAAACCGCCGGCCTCGGCGCGGTGGACAAGAGCATGGTCAAGACCGACCTCGGCTACGCTTCGCGCATCTACC GGCGCCGGCCCGAGTTCGCCAACCAGTGGAAAGTGCTGCTGGTGCTGGCCACGCCTCCCCATCAACGGGCGATGGGCGTG ATCAGTCCGATAGAGGGCGACCGCTGGATGGTGACCACCGGAGGCTGGTTCGGCCATTACCCTGACCGCGATCCGAACGC CTTCCTCAAAGCGCTAGCCGCGCTGCCGATGCCGGACATCCACCAAGTGATACGGGATGCCGAACCGCTGTCCGACGTGT CGGTGTTCCGCATGCCGGGCAGCCTGCGCCGCCATTACGACCGACTGCCGCGCTGGCCGGACGGCCTGCTGGTGGTCGGC GACGCCTTGGCCAGCATGAACCCGCTGTACAGCCAGGGCATGACGCTGTGCGCGCTGGAGGCCGAATGCCTGGACGAGAA TCTGGACGCGCTGCTCGCCGGCGGATTGCGTTGCCAGGAACTGCAGGAAAAGCTGTGCCGCGCGCTGGATCCGGCCTGGC AGATGGCGGTCACCGAGGATCTGCGCTTCCCGGAAACCGAAGGCGAACGAGGCTGGCGCACCCGCTTCCTGCACTGGTAC GGCGCCGGCCTGACCCGGCTGTCCGCCTATCACCGCGGCGCGCTGGAGGCGCAGATCGGCGTCAGCAACCTGATCGTCAA TCCGTCCCGGCTGTACGCGCCGCCGATCGCCGCGCGCATCGTGCTCGGCTCGCTGCTGCCCGGAGAGGCGCGAACATGA
Upstream 100 bases:
>100_bases GAGTGCCCCAACGCCGCCCGGCTGCTGCGCTCGCTGACCACGGTGCCGCTGCACCCGGACCTGGGCAACGCGGACCTCGA CTACATCGCGAGGACATTGA
Downstream 100 bases:
>100_bases GCGCGGCCTGGCTGGCAGGTGTCCGCCACCTGGTATTCGACTGGAACGGCACCCTGATAGACGACATCGATCTGGCGGTG GCCTCGGTAAACCGCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Monooxygenase; FAD Dependent Oxidoreductase; Hydroxylase; Oxygenase; Phytoene Dehydrogenase; Oxidoreductase; Monensin Epoxidase; Epoxidase; NADPH-Dependent Glutamate Synthase Beta Chain; Squalene Monooxygenase; FAD Dependent Dehydrogenase
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTTSPTENAHAVVLGGSVAGCLAAAVLARRYPRVTIVEKSDFHNETGARQSVPQEHHVHLLLQRGKDIMEAIFPGFLSEL EQAGALVADLGHDVKWYQAGRWKNRYRCGIHAHYCSRRLIDTHLRRRVARLPQVTVLSRTQMEGLDFRRDGDRLAVGGVR LRNDDHAWTLDADALVDASGRGTRLPGWLETAGLGAVDKSMVKTDLGYASRIYRRRPEFANQWKVLLVLATPPHQRAMGV ISPIEGDRWMVTTGGWFGHYPDRDPNAFLKALAALPMPDIHQVIRDAEPLSDVSVFRMPGSLRRHYDRLPRWPDGLLVVG DALASMNPLYSQGMTLCALEAECLDENLDALLAGGLRCQELQEKLCRALDPAWQMAVTEDLRFPETEGERGWRTRFLHWY GAGLTRLSAYHRGALEAQIGVSNLIVNPSRLYAPPIAARIVLGSLLPGEART
Sequences:
>Translated_452_residues MTTSPTENAHAVVLGGSVAGCLAAAVLARRYPRVTIVEKSDFHNETGARQSVPQEHHVHLLLQRGKDIMEAIFPGFLSEL EQAGALVADLGHDVKWYQAGRWKNRYRCGIHAHYCSRRLIDTHLRRRVARLPQVTVLSRTQMEGLDFRRDGDRLAVGGVR LRNDDHAWTLDADALVDASGRGTRLPGWLETAGLGAVDKSMVKTDLGYASRIYRRRPEFANQWKVLLVLATPPHQRAMGV ISPIEGDRWMVTTGGWFGHYPDRDPNAFLKALAALPMPDIHQVIRDAEPLSDVSVFRMPGSLRRHYDRLPRWPDGLLVVG DALASMNPLYSQGMTLCALEAECLDENLDALLAGGLRCQELQEKLCRALDPAWQMAVTEDLRFPETEGERGWRTRFLHWY GAGLTRLSAYHRGALEAQIGVSNLIVNPSRLYAPPIAARIVLGSLLPGEART >Mature_451_residues TTSPTENAHAVVLGGSVAGCLAAAVLARRYPRVTIVEKSDFHNETGARQSVPQEHHVHLLLQRGKDIMEAIFPGFLSELE QAGALVADLGHDVKWYQAGRWKNRYRCGIHAHYCSRRLIDTHLRRRVARLPQVTVLSRTQMEGLDFRRDGDRLAVGGVRL RNDDHAWTLDADALVDASGRGTRLPGWLETAGLGAVDKSMVKTDLGYASRIYRRRPEFANQWKVLLVLATPPHQRAMGVI SPIEGDRWMVTTGGWFGHYPDRDPNAFLKALAALPMPDIHQVIRDAEPLSDVSVFRMPGSLRRHYDRLPRWPDGLLVVGD ALASMNPLYSQGMTLCALEAECLDENLDALLAGGLRCQELQEKLCRALDPAWQMAVTEDLRFPETEGERGWRTRFLHWYG AGLTRLSAYHRGALEAQIGVSNLIVNPSRLYAPPIAARIVLGSLLPGEART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50373; Mature: 50242
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPTENAHAVVLGGSVAGCLAAAVLARRYPRVTIVEKSDFHNETGARQSVPQEHHVHL CCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCHHHHHHH LLQRGKDIMEAIFPGFLSELEQAGALVADLGHDVKWYQAGRWKNRYRCGIHAHYCSRRLI HHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCEECCEEHHHHHHHHH DTHLRRRVARLPQVTVLSRTQMEGLDFRRDGDRLAVGGVRLRNDDHAWTLDADALVDASG HHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCEEEECCEEEECCCCCEEECHHHEEECCC RGTRLPGWLETAGLGAVDKSMVKTDLGYASRIYRRRPEFANQWKVLLVLATPPHQRAMGV CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHCCC ISPIEGDRWMVTTGGWFGHYPDRDPNAFLKALAALPMPDIHQVIRDAEPLSDVSVFRMPG CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEECCH SLRRHYDRLPRWPDGLLVVGDALASMNPLYSQGMTLCALEAECLDENLDALLAGGLRCQE HHHHHHHHCCCCCCCEEEECHHHHHCCHHHHCCCEEEEEEHHHHHCCHHHHHHCCCCHHH LQEKLCRALDPAWQMAVTEDLRFPETEGERGWRTRFLHWYGAGLTRLSAYHRGALEAQIG HHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCEECCC VSNLIVNPSRLYAPPIAARIVLGSLLPGEART HHHEEECCHHHCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTSPTENAHAVVLGGSVAGCLAAAVLARRYPRVTIVEKSDFHNETGARQSVPQEHHVHL CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCHHHHHHH LLQRGKDIMEAIFPGFLSELEQAGALVADLGHDVKWYQAGRWKNRYRCGIHAHYCSRRLI HHHCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCEECCEEHHHHHHHHH DTHLRRRVARLPQVTVLSRTQMEGLDFRRDGDRLAVGGVRLRNDDHAWTLDADALVDASG HHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCEEEECCEEEECCCCCEEECHHHEEECCC RGTRLPGWLETAGLGAVDKSMVKTDLGYASRIYRRRPEFANQWKVLLVLATPPHQRAMGV CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHCCC ISPIEGDRWMVTTGGWFGHYPDRDPNAFLKALAALPMPDIHQVIRDAEPLSDVSVFRMPG CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEECCH SLRRHYDRLPRWPDGLLVVGDALASMNPLYSQGMTLCALEAECLDENLDALLAGGLRCQE HHHHHHHHCCCCCCCEEEECHHHHHCCHHHHCCCEEEEEEHHHHHCCHHHHHHCCCCHHH LQEKLCRALDPAWQMAVTEDLRFPETEGERGWRTRFLHWYGAGLTRLSAYHRGALEAQIG HHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHCCCCEECCC VSNLIVNPSRLYAPPIAARIVLGSLLPGEART HHHEEECCHHHCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA