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The map label for this gene is nudK [H]

Identifier: 34496854

GI number: 34496854

Start: 1474238

End: 1474834

Strand: Reverse

Name: nudK [H]

Synonym: CV_1399

Alternate gene names: 34496854

Gene position: 1474834-1474238 (Counterclockwise)

Preceding gene: 34496855

Following gene: 34496853

Centisome position: 31.04

GC content: 64.82

Gene sequence:

>597_bases
ATGAGCGATGTCGCCGCCACTCGGGAACGGGTGCGCATCCAGAAAGTGGAAGTGTTGTCCGATGACTGGTACGTGCTGCG
CAAGACCACTTTCGACTACCGGCGCCGCGACGGCAGCTGGCAGACGCTGTCGCGCGAAACCTACGACCGCGGCAACGGCG
CGGTGATCCTGCTGTACAACCGCGCGCGCCGCTCGGTGATCCTCACCCGCCAGTTCCGCTTTCCAGCCTTCGTCAACGGA
CACGACGGCATGTTGATCGAAGCTTGCGCCGGCCTGCTCGACCAGGACGACGCGGAAACCTGCATCCGCCGCGAAACCGA
GGAGGAGACCGGCTACCGGATAGACAATGTGCGCAAGATATTCGAGGCCTTCATGAGCCCGGGATCGGTCACCGAAAAGC
TGTTCTTCTTCGTCGGCGAATACCACGCCCGCGACAAGGTGGGCGACGGCGGCGGCGTAGCGGCGGACGGCGAGGAGCTG
GAGGTGCTGGAGCTGCCGCTGCAGCAGGCGCTGGCGATGGTGGACTGCGGCGACATCGCCGACGGCAAGACCATCATGCT
GCTGCAGTACGCGCAACTGCACCGGCTGCTGGACTAG

Upstream 100 bases:

>100_bases
TCATGACCGCGCCGGAACAACGCGATCCGGCCATGCTCGCGAAACTGTTGACCGTGGCGCCAAACGCCAACCGATTGATG
AACAAGCAAAAGGAAAATTC

Downstream 100 bases:

>100_bases
CGCGTCCGGCTGCCAGGCTGCGCCGGCTTCAGCCGGCGCGGATGCCCCTCTCAAAACCTCCGGTCGCCCAGAGCCGCAGA
CCACAAAACACCCGGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSDVAATRERVRIQKVEVLSDDWYVLRKTTFDYRRRDGSWQTLSRETYDRGNGAVILLYNRARRSVILTRQFRFPAFVNG
HDGMLIEACAGLLDQDDAETCIRRETEEETGYRIDNVRKIFEAFMSPGSVTEKLFFFVGEYHARDKVGDGGGVAADGEEL
EVLELPLQQALAMVDCGDIADGKTIMLLQYAQLHRLLD

Sequences:

>Translated_198_residues
MSDVAATRERVRIQKVEVLSDDWYVLRKTTFDYRRRDGSWQTLSRETYDRGNGAVILLYNRARRSVILTRQFRFPAFVNG
HDGMLIEACAGLLDQDDAETCIRRETEEETGYRIDNVRKIFEAFMSPGSVTEKLFFFVGEYHARDKVGDGGGVAADGEEL
EVLELPLQQALAMVDCGDIADGKTIMLLQYAQLHRLLD
>Mature_197_residues
SDVAATRERVRIQKVEVLSDDWYVLRKTTFDYRRRDGSWQTLSRETYDRGNGAVILLYNRARRSVILTRQFRFPAFVNGH
DGMLIEACAGLLDQDDAETCIRRETEEETGYRIDNVRKIFEAFMSPGSVTEKLFFFVGEYHARDKVGDGGGVAADGEELE
VLELPLQQALAMVDCGDIADGKTIMLLQYAQLHRLLD

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI37594467, Length=187, Percent_Identity=29.9465240641711, Blast_Score=71, Evalue=6e-13,
Organism=Escherichia coli, GI1788810, Length=191, Percent_Identity=50.7853403141361, Blast_Score=203, Evalue=5e-54,
Organism=Escherichia coli, GI1789412, Length=187, Percent_Identity=29.4117647058824, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22578; Mature: 22447

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVAATRERVRIQKVEVLSDDWYVLRKTTFDYRRRDGSWQTLSRETYDRGNGAVILLYN
CCCHHHHHHHHHHHHHEEECCCEEEEEECHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEC
RARRSVILTRQFRFPAFVNGHDGMLIEACAGLLDQDDAETCIRRETEEETGYRIDNVRKI
CCCCEEEEEEEECCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHCCCCHHHHHHH
FEAFMSPGSVTEKLFFFVGEYHARDKVGDGGGVAADGEELEVLELPLQQALAMVDCGDIA
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCC
DGKTIMLLQYAQLHRLLD
CCCEEEEEEHHHHHHHCC
>Mature Secondary Structure 
SDVAATRERVRIQKVEVLSDDWYVLRKTTFDYRRRDGSWQTLSRETYDRGNGAVILLYN
CCHHHHHHHHHHHHHEEECCCEEEEEECHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEC
RARRSVILTRQFRFPAFVNGHDGMLIEACAGLLDQDDAETCIRRETEEETGYRIDNVRKI
CCCCEEEEEEEECCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHCCCCHHHHHHH
FEAFMSPGSVTEKLFFFVGEYHARDKVGDGGGVAADGEELEVLELPLQQALAMVDCGDIA
HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCC
DGKTIMLLQYAQLHRLLD
CCCEEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA