| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496842
Identifier: 34496842
GI number: 34496842
Start: 1465615
End: 1465941
Strand: Direct
Name: 34496842
Synonym: CV_1387
Alternate gene names: NA
Gene position: 1465615-1465941 (Clockwise)
Preceding gene: 34496841
Following gene: 34496843
Centisome position: 30.85
GC content: 65.44
Gene sequence:
>327_bases ATGGCCTTCCCCACCGCAGTCAACAGCCAGATCACCGACGCCGTCACTCAGTCCAACGTCAAAGTGGTGGGAGAGGCGCC CGCCATGGCGATGGGTTCCATCTATCAGAGCCTGGCCCATTCCACCGGCATCCTGTTCGAGAACGCCGTTTCGGCCCAGC AGCAGCAAACCGCGTTGGCGCAGGCGGTGGCGAACATGGGCGTGATGCAGGTCTACAGCCTGGACACCATCGCTGCGGCG ACAGCCGGCGCGAAGGTGTCCCAGGGCGGCGCCGGAGAGGATCTGTCCAGCTTGTTGGCGGCGCTGCGGAGCTTGCGCGG CCAATAG
Upstream 100 bases:
>100_bases TAGCCGCTCTTAGTGTGAGCCGTTCGCCTAAGTAATGTCACATATTGAAGCGCTTTTCCCTGGCTGCCAGTCTGAAGCGT CAGACCATCAGGAGAGACGC
Downstream 100 bases:
>100_bases CCCCCTCTCGGCCCGCCGCCTGTCCATTCTGCTCGATCGCCGTCCGCTCCAGTTTTATAGGATCAGCTCTTTGTTTTGAT GGATGAAAATGGAGTTGGGT
Product: RebB like protein
Products: NA
Alternate protein names: RebB Like Protein; R Body Protein RebB-Like Protein; R Body Protein; RebA Protein
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MAFPTAVNSQITDAVTQSNVKVVGEAPAMAMGSIYQSLAHSTGILFENAVSAQQQQTALAQAVANMGVMQVYSLDTIAAA TAGAKVSQGGAGEDLSSLLAALRSLRGQ
Sequences:
>Translated_108_residues MAFPTAVNSQITDAVTQSNVKVVGEAPAMAMGSIYQSLAHSTGILFENAVSAQQQQTALAQAVANMGVMQVYSLDTIAAA TAGAKVSQGGAGEDLSSLLAALRSLRGQ >Mature_107_residues AFPTAVNSQITDAVTQSNVKVVGEAPAMAMGSIYQSLAHSTGILFENAVSAQQQQTALAQAVANMGVMQVYSLDTIAAAT AGAKVSQGGAGEDLSSLLAALRSLRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10927; Mature: 10796
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFPTAVNSQITDAVTQSNVKVVGEAPAMAMGSIYQSLAHSTGILFENAVSAQQQQTALA CCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QAVANMGVMQVYSLDTIAAATAGAKVSQGGAGEDLSSLLAALRSLRGQ HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AFPTAVNSQITDAVTQSNVKVVGEAPAMAMGSIYQSLAHSTGILFENAVSAQQQQTALA CCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH QAVANMGVMQVYSLDTIAAATAGAKVSQGGAGEDLSSLLAALRSLRGQ HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA