| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496793
Identifier: 34496793
GI number: 34496793
Start: 1408860
End: 1409234
Strand: Direct
Name: 34496793
Synonym: CV_1338
Alternate gene names: NA
Gene position: 1408860-1409234 (Clockwise)
Preceding gene: 34496792
Following gene: 34496803
Centisome position: 29.65
GC content: 42.93
Gene sequence:
>375_bases ATGAATTGTTTAATGGTGGATCCTTCAGATTTTGATATTTGGGCGCGAGTGGATGTGGGAGCATCTTTAGCTGTGGCAGA GTGGCTTGCTAAAAACTTAGCCATATCGAAAATAGATGCTTTTCGTGCGATATCGCCAGCAATGAAGGCTAGTCAATATA TACAGATATATTCTGGGTATGGTTGGAGTGAGTTGCCAAAGTTATTGGAAAATTTGCCACCGTTTGTTTTGTCAGGGACT GCTGCTTTTGCCAAGGTGGATTGTAGTCCTGAGTACAAAGTCAGTTATTGTGAAGAGCATAAGCTGTATCATCGCCCTGC TGGGTGCCCCATATGTTCTGGAAACTATATTCATGAAGGGTGTCGAGGAGGTTAA
Upstream 100 bases:
>100_bases TGATTTATATTTATGGGTTCGTGAATTTTCTCGGTAAACGTTGGGCTTCATTTCATTCAGCCCAACCTACGGCCCTGTTC CTAAGAAAAGATAATGCAGA
Downstream 100 bases:
>100_bases TTTTCTTGTGCTGACTTGGAAAAGGTCTTACTTGTATGGTTGGTAAGGTTGGTGTGCTGTTTTAAAATAAGTGACCTTCT ATATTTCATCTCGGTAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNCLMVDPSDFDIWARVDVGASLAVAEWLAKNLAISKIDAFRAISPAMKASQYIQIYSGYGWSELPKLLENLPPFVLSGT AAFAKVDCSPEYKVSYCEEHKLYHRPAGCPICSGNYIHEGCRGG
Sequences:
>Translated_124_residues MNCLMVDPSDFDIWARVDVGASLAVAEWLAKNLAISKIDAFRAISPAMKASQYIQIYSGYGWSELPKLLENLPPFVLSGT AAFAKVDCSPEYKVSYCEEHKLYHRPAGCPICSGNYIHEGCRGG >Mature_124_residues MNCLMVDPSDFDIWARVDVGASLAVAEWLAKNLAISKIDAFRAISPAMKASQYIQIYSGYGWSELPKLLENLPPFVLSGT AAFAKVDCSPEYKVSYCEEHKLYHRPAGCPICSGNYIHEGCRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13636; Mature: 13636
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCLMVDPSDFDIWARVDVGASLAVAEWLAKNLAISKIDAFRAISPAMKASQYIQIYSGY CCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEEECCC GWSELPKLLENLPPFVLSGTAAFAKVDCSPEYKVSYCEEHKLYHRPAGCPICSGNYIHEG CHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCHHHHHCHHEECCCCCCEECCCCCCCC CRGG CCCC >Mature Secondary Structure MNCLMVDPSDFDIWARVDVGASLAVAEWLAKNLAISKIDAFRAISPAMKASQYIQIYSGY CCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEEECCC GWSELPKLLENLPPFVLSGTAAFAKVDCSPEYKVSYCEEHKLYHRPAGCPICSGNYIHEG CHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCHHHHHCHHEECCCCCCEECCCCCCCC CRGG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA