| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496768
Identifier: 34496768
GI number: 34496768
Start: 1383422
End: 1384108
Strand: Reverse
Name: 34496768
Synonym: CV_1313
Alternate gene names: NA
Gene position: 1384108-1383422 (Counterclockwise)
Preceding gene: 34496770
Following gene: 34496767
Centisome position: 29.13
GC content: 70.01
Gene sequence:
>687_bases ATGAACCCACCCTATACCATCGTTTTCGCCCTGTATCCCGGCGTCACCCAGCTCGACTTCACCGGCCCGCTGGAGTTTCT GAGCAAGCTGCCCCATGCCCGCTGCGTACTGGCATCCAGCCGGGGGGAAGATATCCGCGCCGACGGCGGCATCGTCTTCG CCGACATCGCCCGGCTTGGCGCTATCGAGCGCTGCGATCTGCTGCTGGTGCCGGGCGGCCTGGGCACCATAGAAGCGATG GAGGATGCCGAATTGCTGGCGCAGTTGCGCCGTCTCGCCGCCAGCGCCGACTATGTCAGCTCGGTCTGCACCGGCTCGCT GCTGCTCGGCGCGGCCGGCCTGCTCAAGGGTCGCCGCGCCGCCTGCCACTGGGCCTGGCTGGACAGCCTGGCGGCCTTCG GCGCCCAGCCCTGCCCGGATCGGGTGGTGGTGGACGGCAAGCTGATCAGCGGCGGCGGCGTCACCGCCGGCATAGACATG GCGCTGACGCTGATGGCGGAAATCGCCGGGCCGCAATTCGCGCAAACGGCGCAGCTGACGCTGGAATACGCGCCGGCTCC GCCATTCGCATCCGGCCGGCCGGAGTTGGCCAGCCCGGAAGTGCTGGCCGCGGCCCGGCAGGGGATCGACCAGGTCAGAG ACCGGCGCGAGGCGGCGGTGATACGCGCCGCCGCCGCATGCTTGTGA
Upstream 100 bases:
>100_bases GCGATGTCCCGGATCATGGCATGAAAAGCTGCAATCTTGTCATTTACGCCAAATCATAGCCATTCGATGATGGCAGGGTC AATCACGGCCCGGAGGCATC
Downstream 100 bases:
>100_bases ATGGGGAAAACCTGTCCAAGCGGCTGACCTGCGCCGCTGCTGCAGCGGCTAAACCTAAAGCATGACACTCCATCCCTGCG CGCGCCGCTCCGGCCCTCCG
Product: ThiJ/PfpI family protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; Transcriptional Regulator; AraC Family Transcriptional Regulator; ThiJ Family Protein; DJ-1/PfpI Family; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; Transcriptional Regulator AraC Family; PfpI Family Protein; Hydratase; Cyclohexyl-Isocyanide Hydratase; ThiH/PfpI Family Amidotransferase; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLGAIERCDLLLVPGGLGTIEAM EDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRAACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDM ALTLMAEIAGPQFAQTAQLTLEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL
Sequences:
>Translated_228_residues MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLGAIERCDLLLVPGGLGTIEAM EDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRAACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDM ALTLMAEIAGPQFAQTAQLTLEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL >Mature_228_residues MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLGAIERCDLLLVPGGLGTIEAM EDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRAACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDM ALTLMAEIAGPQFAQTAQLTLEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23784; Mature: 23784
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLG CCCCEEEEEEECCCCEEECCCCHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEHHHHHC AIERCDLLLVPGGLGTIEAMEDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDMALTLMAEIAGPQFAQTAQLT HHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHHHHHHHHHHHHHCCCCHHCEEEEE LEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNPPYTIVFALYPGVTQLDFTGPLEFLSKLPHARCVLASSRGEDIRADGGIVFADIARLG CCCCEEEEEEECCCCEEECCCCHHHHHHHCCCCEEEEECCCCCCEECCCCEEEEHHHHHC AIERCDLLLVPGGLGTIEAMEDAELLAQLRRLAASADYVSSVCTGSLLLGAAGLLKGRRA CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ACHWAWLDSLAAFGAQPCPDRVVVDGKLISGGGVTAGIDMALTLMAEIAGPQFAQTAQLT HHHHHHHHHHHHHCCCCCCCCEEECCEEECCCCCHHHHHHHHHHHHHHCCCCHHCEEEEE LEYAPAPPFASGRPELASPEVLAAARQGIDQVRDRREAAVIRAAAACL EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA