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The map label for this gene is hvrA [H]

Identifier: 34496698

GI number: 34496698

Start: 1309470

End: 1309778

Strand: Reverse

Name: hvrA [H]

Synonym: CV_1243

Alternate gene names: 34496698

Gene position: 1309778-1309470 (Counterclockwise)

Preceding gene: 34496699

Following gene: 34496697

Centisome position: 27.57

GC content: 49.84

Gene sequence:

>309_bases
ATGGATTATCAATCGCTAAGCTTAACCGAACTGCAAGATTTGCTCGTACAGATCCAAGCAGAGATCAATCAACGTGAGAA
GGCTGAAAAGGCAGAAGCGAAGAGCAAGATCCTTGAGCTGGCTAAAGCTCATGGTCTGTCTTTGGATGACCTGTTCACAC
AGGCTGAGAGCAAGGTTAAGAAGCCAGTAGAGGCGAAATACCGCCACCCTGCTGATGCTTCACAAACGTGGTCTGGACGC
GGCCGTAAACCGCTGTGGCTGCAAGCACTGCTAGACCAAGGCAAGACCTTGGAAGAGCTAGCCATTTAA

Upstream 100 bases:

>100_bases
GTGGATATAGCAACAATTTCAGCTAAACAAGACACGCCTTACTACTTGACTTGCTCAGCACGCTTCGATTTAATAGCATC
ATTACCCTAAGGAGTTAATG

Downstream 100 bases:

>100_bases
TATTCACTCGCAGATAGTCTTTCGTATCCAATGGCTTACCAACTCAACACCTGATTAAGCCACTGGATACGAAGCCATGC
TACTGTAATAGTAAATTCTT

Product: trans-acting regulatory HvrA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDYQSLSLTELQDLLVQIQAEINQREKAEKAEAKSKILELAKAHGLSLDDLFTQAESKVKKPVEAKYRHPADASQTWSGR
GRKPLWLQALLDQGKTLEELAI

Sequences:

>Translated_102_residues
MDYQSLSLTELQDLLVQIQAEINQREKAEKAEAKSKILELAKAHGLSLDDLFTQAESKVKKPVEAKYRHPADASQTWSGR
GRKPLWLQALLDQGKTLEELAI
>Mature_102_residues
MDYQSLSLTELQDLLVQIQAEINQREKAEKAEAKSKILELAKAHGLSLDDLFTQAESKVKKPVEAKYRHPADASQTWSGR
GRKPLWLQALLDQGKTLEELAI

Specific function: It is a dim-light trans-acting activator of Puf and Puh expression, but has no effect on the expression of the Puc operon. It is responsible for regulating light-harvesting-I and reaction center structural gene expression differentially from that of light

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone-like protein H-NS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001801 [H]

Pfam domain/function: PF00816 Histone_HNS [H]

EC number: NA

Molecular weight: Translated: 11500; Mature: 11500

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYQSLSLTELQDLLVQIQAEINQREKAEKAEAKSKILELAKAHGLSLDDLFTQAESKVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
KPVEAKYRHPADASQTWSGRGRKPLWLQALLDQGKTLEELAI
CCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure
MDYQSLSLTELQDLLVQIQAEINQREKAEKAEAKSKILELAKAHGLSLDDLFTQAESKVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
KPVEAKYRHPADASQTWSGRGRKPLWLQALLDQGKTLEELAI
CCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961455 [H]