| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496692
Identifier: 34496692
GI number: 34496692
Start: 1302574
End: 1303017
Strand: Reverse
Name: 34496692
Synonym: CV_1237
Alternate gene names: NA
Gene position: 1303017-1302574 (Counterclockwise)
Preceding gene: 34496697
Following gene: 34496687
Centisome position: 27.43
GC content: 42.12
Gene sequence:
>444_bases ATGTCGATATTTAAATCGTACAATAGCTTATCTCTGGAAAGAAAGCTTGGAATTTGGGGATCAATTGCATCCATTATAGG TTTAATTCTATATTTCTGGCCGACATCCCCTGCTACCAAGTTGGCTCAAACAGCAACAGGTAGCGGGGCAACTCAAATTG GAACTGTTTCGGGTAATGTAACAGTAAACCAACCGTATCCTCAACTAGGAGACCCAGTCGATCTGGCCCGCAATGAACGT ATGGCTACACAAAGCATGCGTGCCATTGCTCGAGATAGAATTCCATACAAGCCCCCCTACCCTGAGGATTGGATTGAGGC TGAAAAATACTATGAAACTGCAAAATACCAATTTGATAGCAAAGATTACGTGAGTGCCGCCAAAAACTACAAGCATGCAT TTGATGCATATGCTGACATTATTGCCAAAAGCAATGATAAATAG
Upstream 100 bases:
>100_bases TCTATGGGTGCAAGAACTGCTGGACCAAGGCAAGACACTGGAAGAAATCACGATCTAACTTCACGTAACTCATGCCAGTA CTTTCTTTGAGGAAATGCAG
Downstream 100 bases:
>100_bases CCAAATTAACTCATAAGTTCTGCTGCAGAAAAACAATAATTTCACTCGAATGGGATTATTGTTTTTTTATTATTGTGCAT TGCCATCGCAAAATCCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSIFKSYNSLSLERKLGIWGSIASIIGLILYFWPTSPATKLAQTATGSGATQIGTVSGNVTVNQPYPQLGDPVDLARNER MATQSMRAIARDRIPYKPPYPEDWIEAEKYYETAKYQFDSKDYVSAAKNYKHAFDAYADIIAKSNDK
Sequences:
>Translated_147_residues MSIFKSYNSLSLERKLGIWGSIASIIGLILYFWPTSPATKLAQTATGSGATQIGTVSGNVTVNQPYPQLGDPVDLARNER MATQSMRAIARDRIPYKPPYPEDWIEAEKYYETAKYQFDSKDYVSAAKNYKHAFDAYADIIAKSNDK >Mature_146_residues SIFKSYNSLSLERKLGIWGSIASIIGLILYFWPTSPATKLAQTATGSGATQIGTVSGNVTVNQPYPQLGDPVDLARNERM ATQSMRAIARDRIPYKPPYPEDWIEAEKYYETAKYQFDSKDYVSAAKNYKHAFDAYADIIAKSNDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16442; Mature: 16310
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFKSYNSLSLERKLGIWGSIASIIGLILYFWPTSPATKLAQTATGSGATQIGTVSGNV CCCHHCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCE TVNQPYPQLGDPVDLARNERMATQSMRAIARDRIPYKPPYPEDWIEAEKYYETAKYQFDS EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC KDYVSAAKNYKHAFDAYADIIAKSNDK HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SIFKSYNSLSLERKLGIWGSIASIIGLILYFWPTSPATKLAQTATGSGATQIGTVSGNV CCHHCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCCE TVNQPYPQLGDPVDLARNERMATQSMRAIARDRIPYKPPYPEDWIEAEKYYETAKYQFDS EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC KDYVSAAKNYKHAFDAYADIIAKSNDK HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA