| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496687
Identifier: 34496687
GI number: 34496687
Start: 1294332
End: 1294925
Strand: Reverse
Name: 34496687
Synonym: CV_1232
Alternate gene names: NA
Gene position: 1294925-1294332 (Counterclockwise)
Preceding gene: 34496692
Following gene: 34496678
Centisome position: 27.26
GC content: 65.49
Gene sequence:
>594_bases ATGGGTTTCAATCCACGCGCCCGCGTTGGGCGCGACGGCATTTTGGGCGCGCAGTATCTGGAAGCCTGGTTGTTTCAATC CACGCGCCCGCGTTGGGCGCGACTCGACCAGATGGCGGTGATCGGTGCCGCCGCGGCGTTTCAATCCACGCGCCCGCGTT GGGCGCGACTCTCCGCTTCTACGTCCTGCATGTTGTACACGCAGTTTCAATCCACGCGCCCGCGTTGGGCGCGACCACCG GTTTTAGCGCGCGGCACAAATTCGACGATGTTTCAATCCACGCGCCCGCGTTGGGCGCGACGCGGCCAAGGTGGAAGCCC AGGCCGTAGCGTTCATGTTTCAATCCACGCGCCCGTGTTGGGCGCGACGCGCAACCGCGTCCAGGGCATCACCAAGCTGT CCGTTTCAATCCACGCGCCCGCGTTGGGCGCGACTTGCTGCGCATCGGTGATGAGCTGGGGGCGTCAGTTTCAATCCACG CGCCCGCGTTGGGCGCGACGCCATGGCATCCAAGCCCGACGCCGGCGTGTCGAGTTTCAATCCACGCGCCCGCGTTGGGC GCGACGTACGGTGCCGAGCAGCATCAAGGAGTGA
Upstream 100 bases:
>100_bases CACGACCTCAAAACTATTGCTCGGTCTATGCATGCAGATGTTTCAATCCACGCACCCGCGTGGGGCGCGACTCCCTCTAT TGAAGCAGTAAAAGCCCTTG
Downstream 100 bases:
>100_bases GACGATGTTTCAATCCACGCGCCCGCGTTGGGCGCGACGATCTCGCCGCGCTCTTCATCGCTGGCGAAATCATTGTTTCA ATCCACGCGCCCGCGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MGFNPRARVGRDGILGAQYLEAWLFQSTRPRWARLDQMAVIGAAAAFQSTRPRWARLSASTSCMLYTQFQSTRPRWARPP VLARGTNSTMFQSTRPRWARRGQGGSPGRSVHVSIHAPVLGATRNRVQGITKLSVSIHAPALGATCCASVMSWGRQFQST RPRWARRHGIQARRRRVEFQSTRPRWARRTVPSSIKE
Sequences:
>Translated_197_residues MGFNPRARVGRDGILGAQYLEAWLFQSTRPRWARLDQMAVIGAAAAFQSTRPRWARLSASTSCMLYTQFQSTRPRWARPP VLARGTNSTMFQSTRPRWARRGQGGSPGRSVHVSIHAPVLGATRNRVQGITKLSVSIHAPALGATCCASVMSWGRQFQST RPRWARRHGIQARRRRVEFQSTRPRWARRTVPSSIKE >Mature_196_residues GFNPRARVGRDGILGAQYLEAWLFQSTRPRWARLDQMAVIGAAAAFQSTRPRWARLSASTSCMLYTQFQSTRPRWARPPV LARGTNSTMFQSTRPRWARRGQGGSPGRSVHVSIHAPVLGATRNRVQGITKLSVSIHAPALGATCCASVMSWGRQFQSTR PRWARRHGIQARRRRVEFQSTRPRWARRTVPSSIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22252; Mature: 22121
Theoretical pI: Translated: 12.80; Mature: 12.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNPRARVGRDGILGAQYLEAWLFQSTRPRWARLDQMAVIGAAAAFQSTRPRWARLSAS CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC TSCMLYTQFQSTRPRWARPPVLARGTNSTMFQSTRPRWARRGQGGSPGRSVHVSIHAPVL CEEEEEEECCCCCCCCCCCCEEEECCCCCHHCCCCCHHHHCCCCCCCCCEEEEEEECCCH GATRNRVQGITKLSVSIHAPALGATCCASVMSWGRQFQSTRPRWARRHGIQARRRRVEFQ HCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHC STRPRWARRTVPSSIKE CCCCHHHHHCCCHHCCC >Mature Secondary Structure GFNPRARVGRDGILGAQYLEAWLFQSTRPRWARLDQMAVIGAAAAFQSTRPRWARLSAS CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC TSCMLYTQFQSTRPRWARPPVLARGTNSTMFQSTRPRWARRGQGGSPGRSVHVSIHAPVL CEEEEEEECCCCCCCCCCCCEEEECCCCCHHCCCCCHHHHCCCCCCCCCEEEEEEECCCH GATRNRVQGITKLSVSIHAPALGATCCASVMSWGRQFQSTRPRWARRHGIQARRRRVEFQ HCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHC STRPRWARRTVPSSIKE CCCCHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA