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The map label for this gene is ykfA [H]

Identifier: 34496665

GI number: 34496665

Start: 1273967

End: 1274848

Strand: Reverse

Name: ykfA [H]

Synonym: CV_1210

Alternate gene names: 34496665

Gene position: 1274848-1273967 (Counterclockwise)

Preceding gene: 34496666

Following gene: 34496659

Centisome position: 26.83

GC content: 58.73

Gene sequence:

>882_bases
ATGATACCGCCTGCCTCACGGCAAGAACTGGCGCAGTGGCTGCAACAGCCCTTCCAGTCCCATGCCGGCGCATTCAGCGA
CGAACAGCTGAACAAACTGCGCGAGCGCATCGAAGAGCTGGTGAATTACGAAGCCGCCGTTGGCTTGATGGGCAAAAGCG
GCGCCGGCAAGTCCAGCCTATGCAATGCCCTGTTCGGGCAGGACGTGGCCGAAGTCGATGACGTGGCCCCCTGCACCGTC
GGCGCTTCCGAATACACCCTGGCCTACCAGAACGGCAAAGGCATCTCGCTGATTGATCTACCCGGCGTCGGCGAACGCCA
GGATAAGGAAGCCGCTTACGCCAAGCAGTATCAAGAGATGCTGCCGGAGCTGGATCTGGTGCTGTGGCTGATCAAAGCGG
ATGATCGCGCGCTGAGCGTGGACGAGCAGTGCTATCAGCGCCTGATCCTGCCCTATCTGATCGAGCACGATATTCCGTTG
CTATTCGTGGTGAATCAGGTAGACAAGATCGAGCCTTGCCGGGAGTGGGACTTCATCCACAGCATGCCCGGCCCGCAGCA
GCGGACCAACATCAGCCGCAAGCAGATGCAGGTCAGCCAATTGTTCAACGTGCCATTGACCCAGATCTTCGTCACTTCCG
CCGTGGAAGGCTACGGCCTGCAGATCCTGATCGAGCAAATCATCCATAGGCTGCCCAAAGAAAAAAAGTGGAGCGTCACG
CGGGAGACCCGCGCCGAGTACGTGACGCCTTCCATGCAGCGGGAATCCATAGGTGGGCTCTGGGACACGATCAAGGAGGC
CGCCAAGACGATCTTGCGCGAAACCTGGACCACGATCTCGCATCGCGTAGAAAGCTGGTTCAACAAACTGTTCAGTTGGT
AG

Upstream 100 bases:

>100_bases
CCAAGCTGAGCAGCATTCTTTTTGATCCCCTTTGACGGCATAACACCCATCCTCAGCTCACCGAGGATGGGCGTGCTATT
TTTATTCCATGGAGAAAATC

Downstream 100 bases:

>100_bases
TAGAGAACAACAGGTAGCTTGAGGAAGGGGATGCTAGGCATCGCATCCTGCAGGAACCGCCTGCTGACCGCGTAGATTCA
CAGCGACCGAGACGGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIPPASRQELAQWLQQPFQSHAGAFSDEQLNKLRERIEELVNYEAAVGLMGKSGAGKSSLCNALFGQDVAEVDDVAPCTV
GASEYTLAYQNGKGISLIDLPGVGERQDKEAAYAKQYQEMLPELDLVLWLIKADDRALSVDEQCYQRLILPYLIEHDIPL
LFVVNQVDKIEPCREWDFIHSMPGPQQRTNISRKQMQVSQLFNVPLTQIFVTSAVEGYGLQILIEQIIHRLPKEKKWSVT
RETRAEYVTPSMQRESIGGLWDTIKEAAKTILRETWTTISHRVESWFNKLFSW

Sequences:

>Translated_293_residues
MIPPASRQELAQWLQQPFQSHAGAFSDEQLNKLRERIEELVNYEAAVGLMGKSGAGKSSLCNALFGQDVAEVDDVAPCTV
GASEYTLAYQNGKGISLIDLPGVGERQDKEAAYAKQYQEMLPELDLVLWLIKADDRALSVDEQCYQRLILPYLIEHDIPL
LFVVNQVDKIEPCREWDFIHSMPGPQQRTNISRKQMQVSQLFNVPLTQIFVTSAVEGYGLQILIEQIIHRLPKEKKWSVT
RETRAEYVTPSMQRESIGGLWDTIKEAAKTILRETWTTISHRVESWFNKLFSW
>Mature_293_residues
MIPPASRQELAQWLQQPFQSHAGAFSDEQLNKLRERIEELVNYEAAVGLMGKSGAGKSSLCNALFGQDVAEVDDVAPCTV
GASEYTLAYQNGKGISLIDLPGVGERQDKEAAYAKQYQEMLPELDLVLWLIKADDRALSVDEQCYQRLILPYLIEHDIPL
LFVVNQVDKIEPCREWDFIHSMPGPQQRTNISRKQMQVSQLFNVPLTQIFVTSAVEGYGLQILIEQIIHRLPKEKKWSVT
RETRAEYVTPSMQRESIGGLWDTIKEAAKTILRETWTTISHRVESWFNKLFSW

Specific function: Unknown

COG id: COG3596

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfjP and yeeP [H]

Homologues:

Organism=Escherichia coli, GI87081706, Length=240, Percent_Identity=40, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI48994902, Length=257, Percent_Identity=37.3540856031128, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 33427; Mature: 33427

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPPASRQELAQWLQQPFQSHAGAFSDEQLNKLRERIEELVNYEAAVGLMGKSGAGKSSL
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
CNALFGQDVAEVDDVAPCTVGASEYTLAYQNGKGISLIDLPGVGERQDKEAAYAKQYQEM
HHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH
LPELDLVLWLIKADDRALSVDEQCYQRLILPYLIEHDIPLLFVVNQVDKIEPCREWDFIH
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCHHHHHHHH
SMPGPQQRTNISRKQMQVSQLFNVPLTQIFVTSAVEGYGLQILIEQIIHRLPKEKKWSVT
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
RETRAEYVTPSMQRESIGGLWDTIKEAAKTILRETWTTISHRVESWFNKLFSW
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPPASRQELAQWLQQPFQSHAGAFSDEQLNKLRERIEELVNYEAAVGLMGKSGAGKSSL
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
CNALFGQDVAEVDDVAPCTVGASEYTLAYQNGKGISLIDLPGVGERQDKEAAYAKQYQEM
HHHHHCCCHHHHHCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH
LPELDLVLWLIKADDRALSVDEQCYQRLILPYLIEHDIPLLFVVNQVDKIEPCREWDFIH
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCHHHHHHHH
SMPGPQQRTNISRKQMQVSQLFNVPLTQIFVTSAVEGYGLQILIEQIIHRLPKEKKWSVT
CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHH
RETRAEYVTPSMQRESIGGLWDTIKEAAKTILRETWTTISHRVESWFNKLFSW
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]