| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is eutB [H]
Identifier: 34496640
GI number: 34496640
Start: 1247654
End: 1249036
Strand: Reverse
Name: eutB [H]
Synonym: CV_1185
Alternate gene names: 34496640
Gene position: 1249036-1247654 (Counterclockwise)
Preceding gene: 34496641
Following gene: 34496639
Centisome position: 26.29
GC content: 69.2
Gene sequence:
>1383_bases ATGAGCCACGCCATCGCCATAGGCCCGCGAACCTACCGCTTCGCCGACTTGAAAACGCTGCTGGCGCGCGCCAGTCCCCT GCGCTCCGGCGACCAGCTGGCCGGCGTCGCCGCCGCCAGCGCCGAAGAGCGGGTGGCGGCGCAGATGTGCCTGGCCGACT TGCCGCTGAAGGTCTTTCTCAACCAGGCGGTGATTCCGTACGAGGAGGACGAGGTCACCCGGCTGATCCTGGACAGCCAT GACCAGGCCGCCTTCGCCGCCGTATCGCACCTGACCGTCGGCGGCCTGCGCGACTGGCTGCTGTCCGACGCCGCCACCGC GGAAACGCTGGCGGCGCTGGCGCCCGGCCTCACGCCGGAAATGGCGGCGGCGGTGTCCAAGCTGATGCGCAACCAGGACC TGGTGCTGGCGGCGAGGAAATGCCGCGTCGTCACCGCCTTCCGCAACACCCAGGGACTGCCCGGCCGCATGGGCGTGCGG CTGCAGCCCAATCATCCGGCCGACGACGCGCGCGCCATCGCCGCCGCGACGCTGGACGGCCTGCTGTACGGCGCCGGCGA CGCGGTGATCGGCATCAACCCGGCCGGCGACAGCCCGGACGACATCCGGAGCTTGCTGACGCTGCTGGACGAGGTGCGCC AGCGCTACGCCATCCCTACCCAGAGCTGCGTGCTCACCCACGTCACCAGCACGCTGGACCTGATGCGCCGGGGCGCGCCG GTGGATCTGGTGTTCCAGTCCATCGCCGGCACTCAGAAGGCCAACGCCGGCTTCGGCGTCAGCCTCGCCGTGCTGGACGA GGCGCATCAGGCGGCGCGGGAGCTGAAGCGCGGCACGGTGGGCGACAATGTGATGTATTTCGAAACCGGCCAGGGCAGCG CGCTGTCGGCCAACGCCCACTGGGGCGTGGACCAACAGACCTGCGAGGCGCGCGCCTACGCGGTGGCGCGGCGCTACTCG CCCTTGCTGGTCAACACCGTGGTCGGCTTCATCGGCCCGGAATACCTGTACAACGGCAAGCAGATCATCCGCGCCGGACT GGAAGACCATTTCTGCGGCAAGCTGCTGGGCCTGCCGATGGGCTGCGACATCTGCTACACCAACCACGCCGAAGCCGACC AGGACGATATGGACGCGCTGTTGACGCTGCTGGGCGCGGCCGGCGTGCATTTCATCATCGGCGTGCCCGGCGCCGACGAC ATCATGCTGGGCTATCAGAGCACCTCCTTCCACGACGCGCTCTACCTGCGCAATGTGCTGGGACTCAAGCGCGCGCCGGA GTTCGAAGACTGGCTGGAAACGATGGAGATCACCCGCGGCGGCAGGCTGCTGCCGCAGGACAGGCGGCAACGGCTGCTGG CGATGATGGAGGGCGTGGCGTGA
Upstream 100 bases:
>100_bases TCGCCACCGCCCGCCAGCGCGCCGCCGCCGCCGACGACGCGCAGCTGCAAGGTTTGGCCGAGCCGCCAGCCGAGCCAGCC CCCTCCGTCCGGAGTCCGAC
Downstream 100 bases:
>100_bases AAGAAAAGCAAAATCCCGTCACCGAAGACGGCTGGGGCGAGCTGTCCCGCCTCACCGCGGCTCGCATCGCGCTGGGCCGC GCCGGCAGCAGCCTGCCCTG
Product: ethanolamine ammonia-lyase heavy chain
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase large subunit [H]
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MSHAIAIGPRTYRFADLKTLLARASPLRSGDQLAGVAAASAEERVAAQMCLADLPLKVFLNQAVIPYEEDEVTRLILDSH DQAAFAAVSHLTVGGLRDWLLSDAATAETLAALAPGLTPEMAAAVSKLMRNQDLVLAARKCRVVTAFRNTQGLPGRMGVR LQPNHPADDARAIAAATLDGLLYGAGDAVIGINPAGDSPDDIRSLLTLLDEVRQRYAIPTQSCVLTHVTSTLDLMRRGAP VDLVFQSIAGTQKANAGFGVSLAVLDEAHQAARELKRGTVGDNVMYFETGQGSALSANAHWGVDQQTCEARAYAVARRYS PLLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGLPMGCDICYTNHAEADQDDMDALLTLLGAAGVHFIIGVPGADD IMLGYQSTSFHDALYLRNVLGLKRAPEFEDWLETMEITRGGRLLPQDRRQRLLAMMEGVA
Sequences:
>Translated_460_residues MSHAIAIGPRTYRFADLKTLLARASPLRSGDQLAGVAAASAEERVAAQMCLADLPLKVFLNQAVIPYEEDEVTRLILDSH DQAAFAAVSHLTVGGLRDWLLSDAATAETLAALAPGLTPEMAAAVSKLMRNQDLVLAARKCRVVTAFRNTQGLPGRMGVR LQPNHPADDARAIAAATLDGLLYGAGDAVIGINPAGDSPDDIRSLLTLLDEVRQRYAIPTQSCVLTHVTSTLDLMRRGAP VDLVFQSIAGTQKANAGFGVSLAVLDEAHQAARELKRGTVGDNVMYFETGQGSALSANAHWGVDQQTCEARAYAVARRYS PLLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGLPMGCDICYTNHAEADQDDMDALLTLLGAAGVHFIIGVPGADD IMLGYQSTSFHDALYLRNVLGLKRAPEFEDWLETMEITRGGRLLPQDRRQRLLAMMEGVA >Mature_459_residues SHAIAIGPRTYRFADLKTLLARASPLRSGDQLAGVAAASAEERVAAQMCLADLPLKVFLNQAVIPYEEDEVTRLILDSHD QAAFAAVSHLTVGGLRDWLLSDAATAETLAALAPGLTPEMAAAVSKLMRNQDLVLAARKCRVVTAFRNTQGLPGRMGVRL QPNHPADDARAIAAATLDGLLYGAGDAVIGINPAGDSPDDIRSLLTLLDEVRQRYAIPTQSCVLTHVTSTLDLMRRGAPV DLVFQSIAGTQKANAGFGVSLAVLDEAHQAARELKRGTVGDNVMYFETGQGSALSANAHWGVDQQTCEARAYAVARRYSP LLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGLPMGCDICYTNHAEADQDDMDALLTLLGAAGVHFIIGVPGADDI MLGYQSTSFHDALYLRNVLGLKRAPEFEDWLETMEITRGGRLLPQDRRQRLLAMMEGVA
Specific function: Ethanolamine utilization. [C]
COG id: COG4303
COG function: function code E; Ethanolamine ammonia-lyase, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082106, Length=434, Percent_Identity=51.6129032258064, Blast_Score=459, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010628 [H]
Pfam domain/function: PF06751 EutB [H]
EC number: =4.3.1.7 [H]
Molecular weight: Translated: 49431; Mature: 49300
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAIAIGPRTYRFADLKTLLARASPLRSGDQLAGVAAASAEERVAAQMCLADLPLKVFL CCCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NQAVIPYEEDEVTRLILDSHDQAAFAAVSHLTVGGLRDWLLSDAATAETLAALAPGLTPE CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MAAAVSKLMRNQDLVLAARKCRVVTAFRNTQGLPGRMGVRLQPNHPADDARAIAAATLDG HHHHHHHHHCCCCCEEEHHHHEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH LLYGAGDAVIGINPAGDSPDDIRSLLTLLDEVRQRYAIPTQSCVLTHVTSTLDLMRRGAP HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC VDLVFQSIAGTQKANAGFGVSLAVLDEAHQAARELKRGTVGDNVMYFETGQGSALSANAH HHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCC WGVDQQTCEARAYAVARRYSPLLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGLPM CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCCC GCDICYTNHAEADQDDMDALLTLLGAAGVHFIIGVPGADDIMLGYQSTSFHDALYLRNVL CCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHH GLKRAPEFEDWLETMEITRGGRLLPQDRRQRLLAMMEGVA HCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SHAIAIGPRTYRFADLKTLLARASPLRSGDQLAGVAAASAEERVAAQMCLADLPLKVFL CCEEEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH NQAVIPYEEDEVTRLILDSHDQAAFAAVSHLTVGGLRDWLLSDAATAETLAALAPGLTPE CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MAAAVSKLMRNQDLVLAARKCRVVTAFRNTQGLPGRMGVRLQPNHPADDARAIAAATLDG HHHHHHHHHCCCCCEEEHHHHEEEEEECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH LLYGAGDAVIGINPAGDSPDDIRSLLTLLDEVRQRYAIPTQSCVLTHVTSTLDLMRRGAP HHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC VDLVFQSIAGTQKANAGFGVSLAVLDEAHQAARELKRGTVGDNVMYFETGQGSALSANAH HHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCC WGVDQQTCEARAYAVARRYSPLLVNTVVGFIGPEYLYNGKQIIRAGLEDHFCGKLLGLPM CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCHHHHHHCCCHHHHHHHHCCCC GCDICYTNHAEADQDDMDALLTLLGAAGVHFIIGVPGADDIMLGYQSTSFHDALYLRNVL CCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHH GLKRAPEFEDWLETMEITRGGRLLPQDRRQRLLAMMEGVA HCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]