| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ydjC [C]
Identifier: 34496613
GI number: 34496613
Start: 1216593
End: 1217405
Strand: Reverse
Name: ydjC [C]
Synonym: CV_1158
Alternate gene names: 34496613
Gene position: 1217405-1216593 (Counterclockwise)
Preceding gene: 34496614
Following gene: 34496610
Centisome position: 25.62
GC content: 68.27
Gene sequence:
>813_bases ATGACGAAACGATTGACACTCTGCGCCGACGACTTCGCCCAGTCCGGCAGCATCAGCGCCGGCATCCTGCAACTGGTCGA TGCCGGCCGCCTGTCCGCCACCAGCGTGCTCTGCCAGTCGCCGCTCTGGCCAGAGCTGGCCGGCGAGATCAAGGCGCGGG CCGATCGCGTCGATGTCGGCTTGCATTTCAATCTCACCCACCCGTTCGACGCGCCGGTCAAGCCGCTGTCTCACTGGCTG ATGAAGAGCCAGTTGCGCCAGCTGTCGCAGGCTGCGCTGCGCGACGAGGCGCTGGCGCAGATCGACAGGTTCGCAGAGCA CTACGGCCGCTTGCCGGACTTCGTCGACGGCCATCAGCACGTGCACGCGCTGCCGGTGATACGCGACGCGCTGTTCGACG CCATCCGGCGGCGCTGGCAACAGGATGCGCCGCCCTACCTGCGCTCGCCCGACAAACTGGGCCATCCCGGCGACAACCGG CTGAAGGCGCTGGTGCTGCGCAGCGTGTGCACCAATTTCGACGAGCAGGCGCGCGAGCGCGGCTTTTCCACCTCGCCGTG GTTCGGCGGCATGTATTCGCTGAGCCCGCAGGCGGATTTCGCCGGTCTGATGCAGGCCTGGCTGGCCCGCGCGCCGGACC GCGCGCTGATCATGTGCCATCCCGGCCTGCCCACCAACGACGCCTCCGACCCCATCGCCGCCAGCCGCGGCCGCGAATTC GATTTTCTCTCCGGCAGCGCCTTCGCCGAGCTTTGCCTCAAGCACAAGGTCGGCATCGCCCGCTTCCAGCCCGAGCCCGC CATCGCCGCCTAA
Upstream 100 bases:
>100_bases GCTCGGCAAGCTGTGGGCCTTCGCCTCCGCGCCACAAACAAATTAACGCCCGGCCGGCTCGCTCGGTAAACTTTCCCGCC AGCCACCGGTCATACCGCCC
Downstream 100 bases:
>100_bases AGGCCTGGGGCGCTCAGGCGCCCGGCCACGGCTGGCACCAGGGCTCGCCCAGGTCCGCCAGCCTGTCGCGGCAGGCCTCG CCGATAAAGCGCTCTCCCGC
Product: cellobiose phosphorylase
Products: alpha-D-glucose 1-phosphate; D-glucose
Alternate protein names: YdjC-Like Protein; Cellobiose Phosphorylase; Exported Protein
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTKRLTLCADDFAQSGSISAGILQLVDAGRLSATSVLCQSPLWPELAGEIKARADRVDVGLHFNLTHPFDAPVKPLSHWL MKSQLRQLSQAALRDEALAQIDRFAEHYGRLPDFVDGHQHVHALPVIRDALFDAIRRRWQQDAPPYLRSPDKLGHPGDNR LKALVLRSVCTNFDEQARERGFSTSPWFGGMYSLSPQADFAGLMQAWLARAPDRALIMCHPGLPTNDASDPIAASRGREF DFLSGSAFAELCLKHKVGIARFQPEPAIAA
Sequences:
>Translated_270_residues MTKRLTLCADDFAQSGSISAGILQLVDAGRLSATSVLCQSPLWPELAGEIKARADRVDVGLHFNLTHPFDAPVKPLSHWL MKSQLRQLSQAALRDEALAQIDRFAEHYGRLPDFVDGHQHVHALPVIRDALFDAIRRRWQQDAPPYLRSPDKLGHPGDNR LKALVLRSVCTNFDEQARERGFSTSPWFGGMYSLSPQADFAGLMQAWLARAPDRALIMCHPGLPTNDASDPIAASRGREF DFLSGSAFAELCLKHKVGIARFQPEPAIAA >Mature_269_residues TKRLTLCADDFAQSGSISAGILQLVDAGRLSATSVLCQSPLWPELAGEIKARADRVDVGLHFNLTHPFDAPVKPLSHWLM KSQLRQLSQAALRDEALAQIDRFAEHYGRLPDFVDGHQHVHALPVIRDALFDAIRRRWQQDAPPYLRSPDKLGHPGDNRL KALVLRSVCTNFDEQARERGFSTSPWFGGMYSLSPQADFAGLMQAWLARAPDRALIMCHPGLPTNDASDPIAASRGREFD FLSGSAFAELCLKHKVGIARFQPEPAIAA
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.4.1.20
Molecular weight: Translated: 29841; Mature: 29710
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRLTLCADDFAQSGSISAGILQLVDAGRLSATSVLCQSPLWPELAGEIKARADRVDVG CCCCEEECHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEE LHFNLTHPFDAPVKPLSHWLMKSQLRQLSQAALRDEALAQIDRFAEHYGRLPDFVDGHQH EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VHALPVIRDALFDAIRRRWQQDAPPYLRSPDKLGHPGDNRLKALVLRSVCTNFDEQARER HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHC GFSTSPWFGGMYSLSPQADFAGLMQAWLARAPDRALIMCHPGLPTNDASDPIAASRGREF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCC DFLSGSAFAELCLKHKVGIARFQPEPAIAA CCCCCHHHHHHHHHHHCCHHHCCCCCCCCC >Mature Secondary Structure TKRLTLCADDFAQSGSISAGILQLVDAGRLSATSVLCQSPLWPELAGEIKARADRVDVG CCCEEECHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHEEEE LHFNLTHPFDAPVKPLSHWLMKSQLRQLSQAALRDEALAQIDRFAEHYGRLPDFVDGHQH EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH VHALPVIRDALFDAIRRRWQQDAPPYLRSPDKLGHPGDNRLKALVLRSVCTNFDEQARER HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHC GFSTSPWFGGMYSLSPQADFAGLMQAWLARAPDRALIMCHPGLPTNDASDPIAASRGREF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHCCCCCC DFLSGSAFAELCLKHKVGIARFQPEPAIAA CCCCCHHHHHHHHHHHCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: cellobiose; phosphate
Specific reaction: cellobiose + phosphate = alpha-D-glucose 1-phosphate + D-glucose
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA