| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34496602
Identifier: 34496602
GI number: 34496602
Start: 1204916
End: 1205836
Strand: Reverse
Name: 34496602
Synonym: CV_1147
Alternate gene names: NA
Gene position: 1205836-1204916 (Counterclockwise)
Preceding gene: 34496605
Following gene: 34496601
Centisome position: 25.38
GC content: 72.31
Gene sequence:
>921_bases ATGGCCGTCCATCAGGATGGCCACCAGCATGCCCGACACGTTCAGCGCCAGCGCCAGCAGGAGGTCGGTGGCGGCGCTGC CCATGCCCGCGCGCACCAGGCCGGCCGGCGGCAGCGCCGCCAGCGACAACAGCAGCGACACCATGCCGGACGTCAGCGCC GCGCCGCCAAGGCCGGTGCGGCAGGCCGCCCACAAGATCAGGGGGAAAAACAGCAGCTGGCTGGGCACGCCGGGCGGCTC GCCGACCGCCAGCAGCAGGCCGACGCCGCCGGCCGACAGCAGCAGGATCAACGCCAGCTCCAGGCGCAGCGGCAGCGGCA GCGGGCGCCCGGCCGGCAAGGCCAGCGGCGCGCACAGGAACAGGGCCGAAGCCAGCGCCGCCCAGCATTGCCAGGTCCAG GGCCAGGGGTTGCCGGAAAGCCCGCCTGCCGCCCAGGCGTAGCCGCCCGGCAACAGCGCCGCGGCCAGCGCAGGATAGAA GATCAGCGCCAGCAGCAGGTGGCGCAGCTGCTGCGGCGTGCCGGGCCGCTCCAGGCCGGCCAGCAGCCCGCCCAGGCGCA GGCCCGGCCGGATCAGATACAAGGACGCCGCCATCAGCAACGCCCACAGCGGCGGCATCCACGCCGCCGCCGCGCTGCCC GCCGCCAGCGGCCACCACCAGCAGCGGCGCGGCTCGCGCGCCAGCAATTGCCAGCACAGCAGGCCGTGCGGCGCGAAACT CGCCAGAGACAATGCCGCGTGCGGACCGCGCGGCCACAAGGCCACGCTGGCGACAAAGCCCAGGAAAACCAACAACTCCT CCACCCTAGGTGTGGCTCTCACGCTCCCATCCTCTTCCTGTCGTCCGGTTGGCCGGATCTTGCTCCATCTCGACTCCGGC GCCCTGGGCGGCAGCGGAGACTTGTCTATTATTTTTTTTGA
Upstream 100 bases:
>100_bases AGCGGCCGTCCATGTCCTTCAGCGACATCATGGTGGGGCTGTGGTTGACCAGGGAGGCGATGCGGGCGCGGAACACCCTC AGCGCCTCGCCGTCGGCGCG
Downstream 100 bases:
>100_bases TATCTGATTCGCATCAATAGCCTATTTTCTTCATGCAAAAGTAAAATAGGCTTGAAGCAAACGCATACGATAGCCGGGAA TCCCCGCGCCGGCTAGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAVHQDGHQHARHVQRQRQQEVGGGAAHARAHQAGRRQRRQRQQQRHHAGRQRRAAKAGAAGRPQDQGEKQQLAGHAGRL ADRQQQADAAGRQQQDQRQLQAQRQRQRAPGRQGQRRAQEQGRSQRRPALPGPGPGVAGKPACRPGVAARQQRRGQRRIE DQRQQQVAQLLRRAGPLQAGQQPAQAQARPDQIQGRRHQQRPQRRHPRRRRAARRQRPPPAAARLARQQLPAQQAVRRET RQRQCRVRTARPQGHAGDKAQENQQLLHPRCGSHAPILFLSSGWPDLAPSRLRRPGRQRRLVYYFF
Sequences:
>Translated_306_residues MAVHQDGHQHARHVQRQRQQEVGGGAAHARAHQAGRRQRRQRQQQRHHAGRQRRAAKAGAAGRPQDQGEKQQLAGHAGRL ADRQQQADAAGRQQQDQRQLQAQRQRQRAPGRQGQRRAQEQGRSQRRPALPGPGPGVAGKPACRPGVAARQQRRGQRRIE DQRQQQVAQLLRRAGPLQAGQQPAQAQARPDQIQGRRHQQRPQRRHPRRRRAARRQRPPPAAARLARQQLPAQQAVRRET RQRQCRVRTARPQGHAGDKAQENQQLLHPRCGSHAPILFLSSGWPDLAPSRLRRPGRQRRLVYYFF >Mature_305_residues AVHQDGHQHARHVQRQRQQEVGGGAAHARAHQAGRRQRRQRQQQRHHAGRQRRAAKAGAAGRPQDQGEKQQLAGHAGRLA DRQQQADAAGRQQQDQRQLQAQRQRQRAPGRQGQRRAQEQGRSQRRPALPGPGPGVAGKPACRPGVAARQQRRGQRRIED QRQQQVAQLLRRAGPLQAGQQPAQAQARPDQIQGRRHQQRPQRRHPRRRRAARRQRPPPAAARLARQQLPAQQAVRRETR QRQCRVRTARPQGHAGDKAQENQQLLHPRCGSHAPILFLSSGWPDLAPSRLRRPGRQRRLVYYFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34961; Mature: 34830
Theoretical pI: Translated: 12.82; Mature: 12.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVHQDGHQHARHVQRQRQQEVGGGAAHARAHQAGRRQRRQRQQQRHHAGRQRRAAKAGA CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGRPQDQGEKQQLAGHAGRLADRQQQADAAGRQQQDQRQLQAQRQRQRAPGRQGQRRAQE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QGRSQRRPALPGPGPGVAGKPACRPGVAARQQRRGQRRIEDQRQQQVAQLLRRAGPLQAG HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QQPAQAQARPDQIQGRRHQQRPQRRHPRRRRAARRQRPPPAAARLARQQLPAQQAVRRET CCCHHHCCCCHHHHCHHHHHCHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH RQRQCRVRTARPQGHAGDKAQENQQLLHPRCGSHAPILFLSSGWPDLAPSRLRRPGRQRR HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHCC LVYYFF EEEEEC >Mature Secondary Structure AVHQDGHQHARHVQRQRQQEVGGGAAHARAHQAGRRQRRQRQQQRHHAGRQRRAAKAGA CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AGRPQDQGEKQQLAGHAGRLADRQQQADAAGRQQQDQRQLQAQRQRQRAPGRQGQRRAQE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QGRSQRRPALPGPGPGVAGKPACRPGVAARQQRRGQRRIEDQRQQQVAQLLRRAGPLQAG HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QQPAQAQARPDQIQGRRHQQRPQRRHPRRRRAARRQRPPPAAARLARQQLPAQQAVRRET CCCHHHCCCCHHHHCHHHHHCHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHH RQRQCRVRTARPQGHAGDKAQENQQLLHPRCGSHAPILFLSSGWPDLAPSRLRRPGRQRR HHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHCCCHHCC LVYYFF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA