| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is mtaD [H]
Identifier: 34496487
GI number: 34496487
Start: 1075739
End: 1077058
Strand: Reverse
Name: mtaD [H]
Synonym: CV_1032
Alternate gene names: 34496487
Gene position: 1077058-1075739 (Counterclockwise)
Preceding gene: 34496490
Following gene: 34496486
Centisome position: 22.67
GC content: 66.21
Gene sequence:
>1320_bases ATGCCGCAGTCCCGTTATGAAAAGATTATCTCCGCCCGCTGGATCATCACCGTGGAAACTGACGGCGAAGTCCTGGAAAA CCACGCGATCGCCATTCGGGACGGCAAGATAGCCGCCATTATTCCAGCAGCCGACGCCGCCGGGCTAGAGGCGGATGAAA GGCTGGAGCTGCCCGACCATGTGCTGATGCCCGGCCTGATCAACCTGCACGGCCACTCCGCGATGTCGCTGCTGCGCGGC CTGGCCGACGACAAGGCGCTGATGGACTGGCTGACCAATTACATCTGGCCCACCGAAGGCAAGCACGTCCACGACGACTT CGTGTTCGACGGCTCGCTGCTGGCGATGGGCGAAATGATCCGCGGCGGCACCACCACCATCAACGACATGTATTTCTATA ATGCCGCCGTCGCCCGCGCCGGCCTGGCTTCCGGCATGCGCACCTTCGTCGGCTGTTCCATCCTGGAATTCCCGACCAAT TACGCGTCCAACGCCGATGACTACATCGCCAAGGGCATGGCCGAGCGCAGCCAGTTCCTGGGGGAAGACCTGCTGACCTT CACGCTGGCGCCGCACGCGCCCTACACCGTATCGGACGATACCTTCCGCAAGGTTGTGACGCTGGCCGAGCAGGAGGACA TGCTGATCCACTGCCACATCCACGAAACCGCGGACGAGGTGAACAACAGCGTCAAGGAGCACGGCCAGCGCCCGCTGGCC CGCCTGCAGCGGCTGGGCCTGCTGTCCCCGCGCCTGGTGGCGGCGCACATGGTGCACCTGAACGACGCCGAAGTCGAACT GGCGGCCAGGCACGGCCTGTCCACCGCGCACAACCCCGCCTCGAACATGAAGCTGGCTTCGGGCATCTCGCCGGTGAGCA AGCTGATGGACGCCGGCGTCGCCGTGGGCATCGGCACCGACGGCGCCGCGTCCAACAACAAGCTGGACATGCTGGCGGAA ACCCGCCTGGCCGCGCTGCTGGCCAAGGTGGGCACCCTGGACCCGACCTCGGTGCCGGCCGCCGCCGCCATCCGCATGGC CACGCTGAACGGCGCGCGCGCGCTGGGCATCGCCGACAAGGTCGGCTCGGTCAAGGTGGGCAAGCAGGCCGACCTGATCG CCCTCGACCTGGCCCAACTGGAAACCGCGCCGGCATTCGACCCGATCTCCCATGTGGTGTACGCTGCCGGTCGCGAACAG GTCAGCCACGTCTGGGTCAAGGGCCGCGCGCTGATGCGCGAGCGCAAGCTGACCACGCTGGACGAAAGCGACCTGAAGGC CCGCGCCGGCGACTGGCGCAACCGCATTCTGGCAAAGTGA
Upstream 100 bases:
>100_bases CGGTGAAATATAAAGAGAGCACAGCAGCTCATTGCCTTGCCGCAATCGCAGGGCCTAAAATCCACGACACTTAAGACAAC GGATCATCAGGATATCAGCC
Downstream 100 bases:
>100_bases TAGCATGAGCAACGTAGACGAACTCGAAATCGACAAATTCAGCCAGCTGGCGCACAAGTGGTGGGACAAGGACAGCGAAT TCAAGCCGCTGCACGAGATC
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MPQSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRG LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFYNAAVARAGLASGMRTFVGCSILEFPTN YASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLA RLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGVAVGIGTDGAASNNKLDMLAE TRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQ VSHVWVKGRALMRERKLTTLDESDLKARAGDWRNRILAK
Sequences:
>Translated_439_residues MPQSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRG LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFYNAAVARAGLASGMRTFVGCSILEFPTN YASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLA RLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGVAVGIGTDGAASNNKLDMLAE TRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQ VSHVWVKGRALMRERKLTTLDESDLKARAGDWRNRILAK >Mature_438_residues PQSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRGL ADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYFYNAAVARAGLASGMRTFVGCSILEFPTNY ASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLAR LQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGVAVGIGTDGAASNNKLDMLAET RLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQV SHVWVKGRALMRERKLTTLDESDLKARAGDWRNRILAK
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=378, Percent_Identity=26.984126984127, Blast_Score=125, Evalue=6e-29, Organism=Escherichia coli, GI1789249, Length=401, Percent_Identity=26.1845386533666, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI87082177, Length=440, Percent_Identity=24.3181818181818, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17540282, Length=428, Percent_Identity=24.7663551401869, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319963, Length=331, Percent_Identity=24.4712990936556, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI24643849, Length=435, Percent_Identity=26.4367816091954, Blast_Score=134, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 47382; Mature: 47251
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDH CCHHHHHHHHHEEEEEEEECCCHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCH VLMPGLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMI HHCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEECCCEEECCHHHHHHHHH RGGTTTINDMYFYNAAVARAGLASGMRTFVGCSILEFPTNYASNADDYIAKGMAERSQFL CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHHHHHHHHHH GEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLA HCHHHEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHH RLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGV HHHHCCCCCCHHHHHHHEECCCCHHHHHHHCCCCCCCCCHHCCCHHCCCCHHHHHHHCCE AVGIGTDGAASNNKLDMLAETRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIADK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCCEEECCHHC VGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQVSHVWVKGRALMRERKLTTL CCCEECCCCCCEEEEEHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC DESDLKARAGDWRNRILAK CCHHHHHHCCCHHHHHCCC >Mature Secondary Structure PQSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDH CHHHHHHHHHEEEEEEEECCCHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCH VLMPGLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMI HHCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEECCCEEECCHHHHHHHHH RGGTTTINDMYFYNAAVARAGLASGMRTFVGCSILEFPTNYASNADDYIAKGMAERSQFL CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHHHHHHHHHH GEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLA HCHHHEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCCHHH RLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGV HHHHCCCCCCHHHHHHHEECCCCHHHHHHHCCCCCCCCCHHCCCHHCCCCHHHHHHHCCE AVGIGTDGAASNNKLDMLAETRLAALLAKVGTLDPTSVPAAAAIRMATLNGARALGIADK EEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEECCCCEEECCHHC VGSVKVGKQADLIALDLAQLETAPAFDPISHVVYAAGREQVSHVWVKGRALMRERKLTTL CCCEECCCCCCEEEEEHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC DESDLKARAGDWRNRILAK CCHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA