| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ubiG
Identifier: 34496486
GI number: 34496486
Start: 1075036
End: 1075734
Strand: Reverse
Name: ubiG
Synonym: CV_1031
Alternate gene names: 34496486
Gene position: 1075734-1075036 (Counterclockwise)
Preceding gene: 34496487
Following gene: 34496485
Centisome position: 22.64
GC content: 65.24
Gene sequence:
>699_bases ATGAGCAACGTAGACGAACTCGAAATCGACAAATTCAGCCAGCTGGCGCACAAGTGGTGGGACAAGGACAGCGAATTCAA GCCGCTGCACGAGATCAACCCGCTGCGCCTGGACTTCATCGACCGCCACGCGTCCATCGCCGGCAAGAAGGTGCTGGACG TCGGCTGCGGCGGCGGCATCCTGGCCGAGAGCATGGCGCTGAGAGGCGCGCAGGTGACCGGCATCGACCTGGCTAAAAAA TCGCTGAAGGTGGCGCAGCTGCACAGCCTGGAGTCCGGCGTGCCCATCGACTACCGCTGCGTGGCGGTGGAGGATCTGGC GGCCGAAATGCCGGGCGCCTTCGATGCGGTGACCTGCATGGAGATGCTGGAACACGTGCCGGACCCGGAAAGCGTGGTGC GCGCCTGCTCCACGCTGGTGAAGCCGGGCGGCTGGGTGTTCTTCTCCACGCTGAACCGCAACGCCAAGGCCTATCTGCTG GCCGTGGTCGGTGCCGAATACGTGTTGAACATGCTGCCGCGCGGCACCCATGAATACGCGCGTTTTCTGAAGCCGTCGGA GCTGGGCCGCATGGCCCGCCACGCCGGCCTCGGCCTGCAGACGCTGAGCGGCATGGGCTACAACCCCGTCACCCGCATCT ACTCGCTGAACGACGACACCGCCGTCAACTACCTGATGGCGACCCGCCGCGCCGACTGA
Upstream 100 bases:
>100_bases CGCGCGCTGATGCGCGAGCGCAAGCTGACCACGCTGGACGAAAGCGACCTGAAGGCCCGCGCCGGCGACTGGCGCAACCG CATTCTGGCAAAGTGATAGC
Downstream 100 bases:
>100_bases GCCCCCCGCCCCGGCCCCGCGCGCCTTGCGGACCGCCCGGCCGGGGAAGGAAGGTCTCCCGGCGGCTGCCCTGCCCATGA GGCCCGGCCATGCCGGGCCT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSNVDELEIDKFSQLAHKWWDKDSEFKPLHEINPLRLDFIDRHASIAGKKVLDVGCGGGILAESMALRGAQVTGIDLAKK SLKVAQLHSLESGVPIDYRCVAVEDLAAEMPGAFDAVTCMEMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLL AVVGAEYVLNMLPRGTHEYARFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYLMATRRAD
Sequences:
>Translated_232_residues MSNVDELEIDKFSQLAHKWWDKDSEFKPLHEINPLRLDFIDRHASIAGKKVLDVGCGGGILAESMALRGAQVTGIDLAKK SLKVAQLHSLESGVPIDYRCVAVEDLAAEMPGAFDAVTCMEMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLL AVVGAEYVLNMLPRGTHEYARFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYLMATRRAD >Mature_231_residues SNVDELEIDKFSQLAHKWWDKDSEFKPLHEINPLRLDFIDRHASIAGKKVLDVGCGGGILAESMALRGAQVTGIDLAKKS LKVAQLHSLESGVPIDYRCVAVEDLAAEMPGAFDAVTCMEMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLLA VVGAEYVLNMLPRGTHEYARFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYLMATRRAD
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=237, Percent_Identity=37.1308016877637, Blast_Score=179, Evalue=2e-45, Organism=Escherichia coli, GI1788564, Length=228, Percent_Identity=57.8947368421053, Blast_Score=277, Evalue=4e-76, Organism=Caenorhabditis elegans, GI115533050, Length=235, Percent_Identity=31.063829787234, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324476, Length=283, Percent_Identity=31.095406360424, Blast_Score=129, Evalue=4e-31, Organism=Drosophila melanogaster, GI24585589, Length=234, Percent_Identity=31.6239316239316, Blast_Score=130, Evalue=7e-31, Organism=Drosophila melanogaster, GI281365311, Length=245, Percent_Identity=30.6122448979592, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_CHRVO (Q7NZ91)
Other databases:
- EMBL: AE016825 - RefSeq: NP_900701.1 - ProteinModelPortal: Q7NZ91 - SMR: Q7NZ91 - GeneID: 2551055 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_1031 - NMPDR: fig|243365.1.peg.1031 - HOGENOM: HBG738842 - OMA: DHAEIAK - PhylomeDB: Q7NZ91 - ProtClustDB: PRK05134 - BioCyc: CVIO243365:CV_1031-MONOMER - BRENDA: 2.1.1.64 - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 25508; Mature: 25376
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNVDELEIDKFSQLAHKWWDKDSEFKPLHEINPLRLDFIDRHASIAGKKVLDVGCGGGI CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEECCCCHH LAESMALRGAQVTGIDLAKKSLKVAQLHSLESGVPIDYRCVAVEDLAAEMPGAFDAVTCM HHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHHHHHHH EMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLLAVVGAEYVLNMLPRGTHEYA HHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCHHHHH RFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYLMATRRAD HHCCHHHHHHHHHHHCCCHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure SNVDELEIDKFSQLAHKWWDKDSEFKPLHEINPLRLDFIDRHASIAGKKVLDVGCGGGI CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHCCCCEEEECCCCHH LAESMALRGAQVTGIDLAKKSLKVAQLHSLESGVPIDYRCVAVEDLAAEMPGAFDAVTCM HHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHHHHHHH EMLEHVPDPESVVRACSTLVKPGGWVFFSTLNRNAKAYLLAVVGAEYVLNMLPRGTHEYA HHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCHHHHH RFLKPSELGRMARHAGLGLQTLSGMGYNPVTRIYSLNDDTAVNYLMATRRAD HHCCHHHHHHHHHHHCCCHHHHCCCCCCCHHEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782