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The map label for this gene is bkdR [H]

Identifier: 34496423

GI number: 34496423

Start: 1001637

End: 1002122

Strand: Reverse

Name: bkdR [H]

Synonym: CV_0968

Alternate gene names: 34496423

Gene position: 1002122-1001637 (Counterclockwise)

Preceding gene: 34496428

Following gene: 34496419

Centisome position: 21.09

GC content: 61.52

Gene sequence:

>486_bases
ATGCCAAGTCTCACATTAGATAAGACAGACTTGCGTATTCTGGCCGAGCTTCAGCTTGACGGCCGGTTGACCAACGTCGA
ACTGGCCGAGCGCGTGGCGCTGTCGCCGTCGCCCTGCCTGCGCCGGCTGAAACAGCTGGAAGAGTCCGGCGTGATCCGCC
AGTACGTCGCGCTGCTCGATCCCGCTCACATCGGTTTGGGCCTGCAGGCCTGGGTGCGCGTCACGCTGGAGAAGCGCGGC
AACATGCACCTGCAGAGCTTCATCGAAGCGGTGCAGAACTGGCCGGAGGTGATCAACTGCTTCGCGATGACCGGCGAGAT
GGATTACCTGCTGCAGGTGTATTTCGAAGACATGGAGCACTTCTCGCGCTTCGTGATGGACGAGCTGCTGCAGCATCCCG
GCGTGGAGGACGTCAAATCCAGCTTCGTGCTCAAGGAGATCAAACGCACCACCGCGCTGCCGCTGGGCCAGATGCGCGGC
ATCTGA

Upstream 100 bases:

>100_bases
TATTCTATGGAAAGCGGCCGGCAATTATCTTGCTAAATGACTTTTTCCGGACGATATTGAAGAATAAAATGGCTCAACAA
TCCGATTATCAGGAGAAAAT

Downstream 100 bases:

>100_bases
CCAGTCCCGCGCGGAAAAGCGAAACGGCCCTCACGGGCCGTTTCGCATTGGGGCGCGCTCAATGGCGCTGATGGTGGGCG
GTGGTGCCGGCCAGCAACTT

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPSLTLDKTDLRILAELQLDGRLTNVELAERVALSPSPCLRRLKQLEESGVIRQYVALLDPAHIGLGLQAWVRVTLEKRG
NMHLQSFIEAVQNWPEVINCFAMTGEMDYLLQVYFEDMEHFSRFVMDELLQHPGVEDVKSSFVLKEIKRTTALPLGQMRG
I

Sequences:

>Translated_161_residues
MPSLTLDKTDLRILAELQLDGRLTNVELAERVALSPSPCLRRLKQLEESGVIRQYVALLDPAHIGLGLQAWVRVTLEKRG
NMHLQSFIEAVQNWPEVINCFAMTGEMDYLLQVYFEDMEHFSRFVMDELLQHPGVEDVKSSFVLKEIKRTTALPLGQMRG
I
>Mature_160_residues
PSLTLDKTDLRILAELQLDGRLTNVELAERVALSPSPCLRRLKQLEESGVIRQYVALLDPAHIGLGLQAWVRVTLEKRGN
MHLQSFIEAVQNWPEVINCFAMTGEMDYLLQVYFEDMEHFSRFVMDELLQHPGVEDVKSSFVLKEIKRTTALPLGQMRGI

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=152, Percent_Identity=40.1315789473684, Blast_Score=126, Evalue=6e-31,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=42.6666666666667, Blast_Score=119, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18409; Mature: 18278

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSLTLDKTDLRILAELQLDGRLTNVELAERVALSPSPCLRRLKQLEESGVIRQYVALLD
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHC
PAHIGLGLQAWVRVTLEKRGNMHLQSFIEAVQNWPEVINCFAMTGEMDYLLQVYFEDMEH
HHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FSRFVMDELLQHPGVEDVKSSFVLKEIKRTTALPLGQMRGI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure 
PSLTLDKTDLRILAELQLDGRLTNVELAERVALSPSPCLRRLKQLEESGVIRQYVALLD
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHC
PAHIGLGLQAWVRVTLEKRGNMHLQSFIEAVQNWPEVINCFAMTGEMDYLLQVYFEDMEH
HHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
FSRFVMDELLQHPGVEDVKSSFVLKEIKRTTALPLGQMRGI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]