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The map label for this gene is yedQ [H]

Identifier: 34496419

GI number: 34496419

Start: 996781

End: 998367

Strand: Reverse

Name: yedQ [H]

Synonym: CV_0964

Alternate gene names: 34496419

Gene position: 998367-996781 (Counterclockwise)

Preceding gene: 34496423

Following gene: 34496417

Centisome position: 21.01

GC content: 68.94

Gene sequence:

>1587_bases
ATGAGTTTCGTGTTCACCCCGCTGGCCGCCTTGTCCGGCCTGGCCGCGCTGCTGGCGGCGGCCATCAGCGTGATCGCCTG
GAGCCGCAGACGCTTCGCCGGCGTGCGCTGGCTGGCGCTGCTGATGGCCTCGGTCGCGTTCTGGGCCGCCGGCGCGATGT
GCGAACTGTCCGTCACCAGCATAGCCGCCAAGCTGTTCTGGTCCAAGGTGGAATACCTGGGCACGCTGAGCACGCCGGTG
CTGTTCTTGCTGCTGGCGCTGGACTACAACCATCTCTCGCTGCGCCGGCGCGCGCTGGCCCTGCTGTTCGCCATCCCCGC
CATCTGCCTGCTGCTGGCCGCCAGCAACGAATACCACCACCTGGTGTGGACCCGCTTCCAGCCCAGCCCTTCCGGCTACA
ACCTGCTGGTCTACGGGCACGGTCCGGCGTTCTGGCTGGGCGTGGCCGGCTATTCCTACCTGATGATGCTGCTGGGCAGC
CTGTTGCTGATCCGCGCGCTGCACTACTTTCCCGCTCATTTCCGCGGCCAGTCGCTGACGCTGATGCTCAGCGCGATCGC
GCCGTGGTTCGGCAACATCCTCTATCTGACCGGCGCTTTCCCACTGCAAGGGCTGGACCCGACGCCGCACTCCTTCGCCT
TCACCGGACTGATCTTCGCCATCGATCTGCTATACCTGCGCCAGCTGCACCTGGTGCCGGTGGCGCGCGCGCGGGCGTTC
GAGGCCATGGGAGACGGCGTGGTGGTGGTCGACCACCAGTTGCGCATCCTGGACATCAACCCGTCCGGCGCCGGGATGCT
GGGCGGCGCGCCGGCGGACTGGCCCGGCCAGCCCCTGCCCGCGCCATGGCTGGAGGCCAGCATGCTGGCTCCCGGCGCGC
ATCTTGAACTGATGCCGCCAGACGGCGGCCGCATCCTGGATGTCCGCATCTACGACATCGAGCCCTTCCACAAGCCGGCG
CGCACCCGCATGCTGGTGATGCGCGACATCACGCTGCGCCGCCAGGCCGAAGACGCGTTGCGCGAGGCGAATCTGCAATT
GACCGACAGGCTGGCCCAGATCGAGGCGCTGCAGGCGGCGCTGCGCGAACAGACGCTGCGCGATCCGCTGACCCATCTGT
TCAACCGCCGCTACCTGGACGAAACCTTCGAGCGCGAGCGCGAACGGGCCGAGCGCGAGGGCAAGCCGATCGCGGTGGCG
ATGCTGGACCTGGACGACTTCAAGCGCATCAACGACCGGCACGGCCACCAGATCGGCGATCGCGTGCTGCAGGCGCTGGC
CGGCCTGCTGCGGGAGCGGAGCCGGGCCGCCGACATCGTCTGCCGGCTGGGAGGCGAGGAATTCATGGTGGTGCTGCCCG
GCAGCGACGCCGAACAGGCGCAGCACAGGGTCGAGGAATGGCGGCGCGCCTTCCACCAGATGGAGCATGCCGGCGAGCAT
CCGTTCCGCGCCAGCTTCTCCTGCGGCATCGCCGCCCTGCCCGGCAACGGCCGCGTGCTGGACGAGCTGTACCGCCGCGC
CGACCAGGCGCTGTATCAGGCCAAGGCCGCCGGCAAGAACTGCAGCGTGCGCGCCGGACGCGGATAA

Upstream 100 bases:

>100_bases
TCCTCGGGTGACCGGAACATTATACCCAGTCGAATCGGAAAAGGTAGGACTTGTCATGTCAAAGCGATAAACTAGCGGCT
TGCCTCCATTCCGGACCGCC

Downstream 100 bases:

>100_bases
TAAAAAAACCGCCAGCGCGAACTGGCGGTTTCTTCGATGCAACCGGTTATGGTTACAGCCCGGCGTCGGCGCGCAGCGCC
TCCACTTTGTCGGTGCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSFVFTPLAALSGLAALLAAAISVIAWSRRRFAGVRWLALLMASVAFWAAGAMCELSVTSIAAKLFWSKVEYLGTLSTPV
LFLLLALDYNHLSLRRRALALLFAIPAICLLLAASNEYHHLVWTRFQPSPSGYNLLVYGHGPAFWLGVAGYSYLMMLLGS
LLLIRALHYFPAHFRGQSLTLMLSAIAPWFGNILYLTGAFPLQGLDPTPHSFAFTGLIFAIDLLYLRQLHLVPVARARAF
EAMGDGVVVVDHQLRILDINPSGAGMLGGAPADWPGQPLPAPWLEASMLAPGAHLELMPPDGGRILDVRIYDIEPFHKPA
RTRMLVMRDITLRRQAEDALREANLQLTDRLAQIEALQAALREQTLRDPLTHLFNRRYLDETFERERERAEREGKPIAVA
MLDLDDFKRINDRHGHQIGDRVLQALAGLLRERSRAADIVCRLGGEEFMVVLPGSDAEQAQHRVEEWRRAFHQMEHAGEH
PFRASFSCGIAALPGNGRVLDELYRRADQALYQAKAAGKNCSVRAGRG

Sequences:

>Translated_528_residues
MSFVFTPLAALSGLAALLAAAISVIAWSRRRFAGVRWLALLMASVAFWAAGAMCELSVTSIAAKLFWSKVEYLGTLSTPV
LFLLLALDYNHLSLRRRALALLFAIPAICLLLAASNEYHHLVWTRFQPSPSGYNLLVYGHGPAFWLGVAGYSYLMMLLGS
LLLIRALHYFPAHFRGQSLTLMLSAIAPWFGNILYLTGAFPLQGLDPTPHSFAFTGLIFAIDLLYLRQLHLVPVARARAF
EAMGDGVVVVDHQLRILDINPSGAGMLGGAPADWPGQPLPAPWLEASMLAPGAHLELMPPDGGRILDVRIYDIEPFHKPA
RTRMLVMRDITLRRQAEDALREANLQLTDRLAQIEALQAALREQTLRDPLTHLFNRRYLDETFERERERAEREGKPIAVA
MLDLDDFKRINDRHGHQIGDRVLQALAGLLRERSRAADIVCRLGGEEFMVVLPGSDAEQAQHRVEEWRRAFHQMEHAGEH
PFRASFSCGIAALPGNGRVLDELYRRADQALYQAKAAGKNCSVRAGRG
>Mature_527_residues
SFVFTPLAALSGLAALLAAAISVIAWSRRRFAGVRWLALLMASVAFWAAGAMCELSVTSIAAKLFWSKVEYLGTLSTPVL
FLLLALDYNHLSLRRRALALLFAIPAICLLLAASNEYHHLVWTRFQPSPSGYNLLVYGHGPAFWLGVAGYSYLMMLLGSL
LLIRALHYFPAHFRGQSLTLMLSAIAPWFGNILYLTGAFPLQGLDPTPHSFAFTGLIFAIDLLYLRQLHLVPVARARAFE
AMGDGVVVVDHQLRILDINPSGAGMLGGAPADWPGQPLPAPWLEASMLAPGAHLELMPPDGGRILDVRIYDIEPFHKPAR
TRMLVMRDITLRRQAEDALREANLQLTDRLAQIEALQAALREQTLRDPLTHLFNRRYLDETFERERERAEREGKPIAVAM
LDLDDFKRINDRHGHQIGDRVLQALAGLLRERSRAADIVCRLGGEEFMVVLPGSDAEQAQHRVEEWRRAFHQMEHAGEHP
FRASFSCGIAALPGNGRVLDELYRRADQALYQAKAAGKNCSVRAGRG

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1787262, Length=159, Percent_Identity=35.2201257861635, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI87082007, Length=176, Percent_Identity=39.7727272727273, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI145693134, Length=182, Percent_Identity=34.6153846153846, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786584, Length=160, Percent_Identity=31.25, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI87081881, Length=170, Percent_Identity=34.7058823529412, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1788381, Length=302, Percent_Identity=26.8211920529801, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1787816, Length=230, Percent_Identity=31.7391304347826, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788085, Length=179, Percent_Identity=29.608938547486, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI87081974, Length=161, Percent_Identity=31.055900621118, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1787802, Length=180, Percent_Identity=27.2222222222222, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI87081977, Length=169, Percent_Identity=31.9526627218935, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 58703; Mature: 58572

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVFTPLAALSGLAALLAAAISVIAWSRRRFAGVRWLALLMASVAFWAAGAMCELSVTS
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IAAKLFWSKVEYLGTLSTPVLFLLLALDYNHLSLRRRALALLFAIPAICLLLAASNEYHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LVWTRFQPSPSGYNLLVYGHGPAFWLGVAGYSYLMMLLGSLLLIRALHYFPAHFRGQSLT
EEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH
LMLSAIAPWFGNILYLTGAFPLQGLDPTPHSFAFTGLIFAIDLLYLRQLHLVPVARARAF
HHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAMGDGVVVVDHQLRILDINPSGAGMLGGAPADWPGQPLPAPWLEASMLAPGAHLELMPP
HHCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECC
DGGRILDVRIYDIEPFHKPARTRMLVMRDITLRRQAEDALREANLQLTDRLAQIEALQAA
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LREQTLRDPLTHLFNRRYLDETFERERERAEREGKPIAVAMLDLDDFKRINDRHGHQIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHH
RVLQALAGLLRERSRAADIVCRLGGEEFMVVLPGSDAEQAQHRVEEWRRAFHQMEHAGEH
HHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
PFRASFSCGIAALPGNGRVLDELYRRADQALYQAKAAGKNCSVRAGRG
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC
>Mature Secondary Structure 
SFVFTPLAALSGLAALLAAAISVIAWSRRRFAGVRWLALLMASVAFWAAGAMCELSVTS
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IAAKLFWSKVEYLGTLSTPVLFLLLALDYNHLSLRRRALALLFAIPAICLLLAASNEYHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LVWTRFQPSPSGYNLLVYGHGPAFWLGVAGYSYLMMLLGSLLLIRALHYFPAHFRGQSLT
EEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHH
LMLSAIAPWFGNILYLTGAFPLQGLDPTPHSFAFTGLIFAIDLLYLRQLHLVPVARARAF
HHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAMGDGVVVVDHQLRILDINPSGAGMLGGAPADWPGQPLPAPWLEASMLAPGAHLELMPP
HHCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEECC
DGGRILDVRIYDIEPFHKPARTRMLVMRDITLRRQAEDALREANLQLTDRLAQIEALQAA
CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LREQTLRDPLTHLFNRRYLDETFERERERAEREGKPIAVAMLDLDDFKRINDRHGHQIGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCHHHHH
RVLQALAGLLRERSRAADIVCRLGGEEFMVVLPGSDAEQAQHRVEEWRRAFHQMEHAGEH
HHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
PFRASFSCGIAALPGNGRVLDELYRRADQALYQAKAAGKNCSVRAGRG
CCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA