| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is maeB [H]
Identifier: 34496371
GI number: 34496371
Start: 947206
End: 949491
Strand: Reverse
Name: maeB [H]
Synonym: CV_0916
Alternate gene names: 34496371
Gene position: 949491-947206 (Counterclockwise)
Preceding gene: 34496372
Following gene: 34496370
Centisome position: 19.98
GC content: 65.66
Gene sequence:
>2286_bases ATGGACGAGCAATTGCGCCAAAGCGCACTGGAGTTTCACCAGTTCCCGACACCGGGCAAGATTCAGGTTGCCCCGACCAA GCCGCTGACCACCCAGCGCGATCTGGCACTGGCCTACTCCCCCGGCGTGACCGCCCCGTGCGACGCCATCGTCGAAGACC CGCTCAACGCCTACAAATACACCGCCCGCGGCAACCTGGTGGCCGTGATTTCCAACGGCACCGCTGTGCTCGGCCTGGGC AACATCGGCGCGCTGGCCAGCAAGCCGGTGATGGAAGGCAAGGGCGTATTGTTCAAGAAGTTCGCCGGCATCGACGTGTT CGACATCGAGGTCAACGAGCTCGATCCCGACAAGCTGGTCGACATCATCTGCTCGCTGGAGCCGACCTTCGGCGGCATCA ACCTGGAAGACATCAAGGCGCCGGAGTGCTTCTACATCGAGAAGAAGTGCCGCGAGCGCATGGGCATTCCGGTCTTCCAC GACGACCAGCACGGCACCGCCATCGTGGCGGCCGCGGCTGTGCTGAACGGCCTGCGCCTGGTGAAAAAGGAAATCGGCGA AGTGCGCGTGGTGGCCTCCGGCGCCGGCGCCGCCGCCATCGCCTGCCTGGACCTGTTGGTGGCCCTGGGCGTGAAGCGCG AAAACATCACCATCTGCGACTCCAAGGGCGTGGTCTTCGTCGGCCGCGACGAGAAGCTGGACGAATCCAAGCTGCGCTAC GCCATCCAGGACAACGGCTGGCGCAAGCTGGCCGACGCGATGGCCGGCGCCGACATCTTCATGGGTCTGTCCGGCCCGCG CCTGGTGAGCCAGGACATGGTGAAGAGCATGGCCCGCGATCCGCTGATCCTGGCCATGGCCAACCCGGAACCGGAAATCC TGCCGCCGCTGGTCAAGGAAGTGCGCCCGGACGCCATCATCGGCACCGGCCGCTCGGACTTCCCGAACCAGGTCAACAAC GTGCTGTGCTTCCCCTTCATCTTCCGCGGCGCGCTGGACGTGGGCGCGACCACCATCAATGAAGAGATGAAGCTGGCCAC CGTGCGCGCGATCGCCGACCTGGCGATGGCCGAGCAGAACGACGTGGTCGCCTCCGCCTACGGCGACCAGGAGCTGTCCT TCGGTCCGGAATACGTGATTCCGAAACCGTTCGACCCGCGCCTGATCGTCAAGATCGCCCCCGCCGTGGCCAAGGCCGCG ATGGATTCCGGCGTCGCCACCCGTCCGATCCAGGACTTCGACGCCTACGCCGACCAGTTGGCCCAGTTCGTCTACAAGAC CAACCTGTTCATGAAGCCGGTGTTCGCCCAGGCCAAGAAGGATCCGAAGCGCGTGGTGATGACCGAGGGCGAGGACGAGC GCGTGCTGCACGCCACCCAGGAGATCGTCACCCAGGGCCTGGCCAAGCCGATCCTGGTGGGCCGCCCCAGCGTGATCGAG AAGCGCATCGAGAAGCTGGGCCTGAAGATGCGTCCGGGCGTGGACTTCGAACTGGTCAACAATGAATCCGACCCGCGCTT CAACGACTACTGGCAGGACTACTACCAGCTGATGAAGCGCAAGGGCGTGTCGCAGGAGCAGGCCCGCCGCCGCGTGATCG GCAACACCACGCTGATCGGCGCGATGATGGTGCGCCGCGGCGACGCCGACGCGCTGATCTGCGGCACCTACGGCCCGTAC CGCCAGCACTTCGACATCCTGGAGAACGTGCTGGGCTACGCCAACAAGGACAAGGTGGCCGGCGCGATGAACGCGCTGAT CCTGCCGACCGGCAACATCTTCATCACCGACACCTACGTCAACGCCGAGCCCTCCGCCGAGCAGCTGGCCGCCATCACCA AGATGGCCGCGCAAAGCATCCAGCGCTTCGGCATCCAGCCGAAGGCCGCGCTGCTGTCCAACTCCAGCTTCGGCGCACTT AACACCGCGTCGGCGCAGAAGATGCGCGCCGCCTTCGACCAGATCCGCGCCGCCCAGCCGGAACTGGAAATCGACGGCGA GATGCAGGGCGACGCCGCGCTGGTGGAAAGCATCCGCCAGCAGGCGATGCCGGACTCCACGCTGAAGGGCTCGGCCAATC TGCTGATCATGCCGAACGTGGAAGCCGCCAACATCAGCTACAACCTGCTGCGCGTGTCGGCGTCCGACGGCGTGACCATC GGCCCGATCCTGATGGGCATGGCCAAGCCGGCGCACATCCTGACCCCGATCTCGTCGGTGCGCCGCATCGTCAACATGGT GGCGCTGGCCTCGGTCGACGCCCAGGTCGCCGCGCAACAGGGCTGA
Upstream 100 bases:
>100_bases GTCCGACACGGCATAGCCCAGGCCTGGCATAAGCCTTATAATGCGAGGCTGATTCTCCCTTACCGACATAAAAGAACATT TCTCAATCAGGAGCCTGCGA
Downstream 100 bases:
>100_bases TCCGGCGCCTCAGGCGTCTTATACTGAACGGGCAAGCGTCGCTTGCCCGTTTTTTCATTGCAGGAAACGTCGATGAGCCA AGACAACCATAACGACCCGT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MDEQLRQSALEFHQFPTPGKIQVAPTKPLTTQRDLALAYSPGVTAPCDAIVEDPLNAYKYTARGNLVAVISNGTAVLGLG NIGALASKPVMEGKGVLFKKFAGIDVFDIEVNELDPDKLVDIICSLEPTFGGINLEDIKAPECFYIEKKCRERMGIPVFH DDQHGTAIVAAAAVLNGLRLVKKEIGEVRVVASGAGAAAIACLDLLVALGVKRENITICDSKGVVFVGRDEKLDESKLRY AIQDNGWRKLADAMAGADIFMGLSGPRLVSQDMVKSMARDPLILAMANPEPEILPPLVKEVRPDAIIGTGRSDFPNQVNN VLCFPFIFRGALDVGATTINEEMKLATVRAIADLAMAEQNDVVASAYGDQELSFGPEYVIPKPFDPRLIVKIAPAVAKAA MDSGVATRPIQDFDAYADQLAQFVYKTNLFMKPVFAQAKKDPKRVVMTEGEDERVLHATQEIVTQGLAKPILVGRPSVIE KRIEKLGLKMRPGVDFELVNNESDPRFNDYWQDYYQLMKRKGVSQEQARRRVIGNTTLIGAMMVRRGDADALICGTYGPY RQHFDILENVLGYANKDKVAGAMNALILPTGNIFITDTYVNAEPSAEQLAAITKMAAQSIQRFGIQPKAALLSNSSFGAL NTASAQKMRAAFDQIRAAQPELEIDGEMQGDAALVESIRQQAMPDSTLKGSANLLIMPNVEAANISYNLLRVSASDGVTI GPILMGMAKPAHILTPISSVRRIVNMVALASVDAQVAAQQG
Sequences:
>Translated_761_residues MDEQLRQSALEFHQFPTPGKIQVAPTKPLTTQRDLALAYSPGVTAPCDAIVEDPLNAYKYTARGNLVAVISNGTAVLGLG NIGALASKPVMEGKGVLFKKFAGIDVFDIEVNELDPDKLVDIICSLEPTFGGINLEDIKAPECFYIEKKCRERMGIPVFH DDQHGTAIVAAAAVLNGLRLVKKEIGEVRVVASGAGAAAIACLDLLVALGVKRENITICDSKGVVFVGRDEKLDESKLRY AIQDNGWRKLADAMAGADIFMGLSGPRLVSQDMVKSMARDPLILAMANPEPEILPPLVKEVRPDAIIGTGRSDFPNQVNN VLCFPFIFRGALDVGATTINEEMKLATVRAIADLAMAEQNDVVASAYGDQELSFGPEYVIPKPFDPRLIVKIAPAVAKAA MDSGVATRPIQDFDAYADQLAQFVYKTNLFMKPVFAQAKKDPKRVVMTEGEDERVLHATQEIVTQGLAKPILVGRPSVIE KRIEKLGLKMRPGVDFELVNNESDPRFNDYWQDYYQLMKRKGVSQEQARRRVIGNTTLIGAMMVRRGDADALICGTYGPY RQHFDILENVLGYANKDKVAGAMNALILPTGNIFITDTYVNAEPSAEQLAAITKMAAQSIQRFGIQPKAALLSNSSFGAL NTASAQKMRAAFDQIRAAQPELEIDGEMQGDAALVESIRQQAMPDSTLKGSANLLIMPNVEAANISYNLLRVSASDGVTI GPILMGMAKPAHILTPISSVRRIVNMVALASVDAQVAAQQG >Mature_761_residues MDEQLRQSALEFHQFPTPGKIQVAPTKPLTTQRDLALAYSPGVTAPCDAIVEDPLNAYKYTARGNLVAVISNGTAVLGLG NIGALASKPVMEGKGVLFKKFAGIDVFDIEVNELDPDKLVDIICSLEPTFGGINLEDIKAPECFYIEKKCRERMGIPVFH DDQHGTAIVAAAAVLNGLRLVKKEIGEVRVVASGAGAAAIACLDLLVALGVKRENITICDSKGVVFVGRDEKLDESKLRY AIQDNGWRKLADAMAGADIFMGLSGPRLVSQDMVKSMARDPLILAMANPEPEILPPLVKEVRPDAIIGTGRSDFPNQVNN VLCFPFIFRGALDVGATTINEEMKLATVRAIADLAMAEQNDVVASAYGDQELSFGPEYVIPKPFDPRLIVKIAPAVAKAA MDSGVATRPIQDFDAYADQLAQFVYKTNLFMKPVFAQAKKDPKRVVMTEGEDERVLHATQEIVTQGLAKPILVGRPSVIE KRIEKLGLKMRPGVDFELVNNESDPRFNDYWQDYYQLMKRKGVSQEQARRRVIGNTTLIGAMMVRRGDADALICGTYGPY RQHFDILENVLGYANKDKVAGAMNALILPTGNIFITDTYVNAEPSAEQLAAITKMAAQSIQRFGIQPKAALLSNSSFGAL NTASAQKMRAAFDQIRAAQPELEIDGEMQGDAALVESIRQQAMPDSTLKGSANLLIMPNVEAANISYNLLRVSASDGVTI GPILMGMAKPAHILTPISSVRRIVNMVALASVDAQVAAQQG
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=348, Percent_Identity=26.4367816091954, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI62420882, Length=354, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI62420880, Length=354, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI239049447, Length=354, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=6e-11, Organism=Escherichia coli, GI1788806, Length=755, Percent_Identity=73.6423841059603, Blast_Score=1190, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=329, Percent_Identity=29.7872340425532, Blast_Score=136, Evalue=5e-33, Organism=Escherichia coli, GI1788800, Length=326, Percent_Identity=29.7546012269939, Blast_Score=119, Evalue=6e-28, Organism=Saccharomyces cerevisiae, GI6322823, Length=240, Percent_Identity=28.3333333333333, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356279, Length=474, Percent_Identity=24.0506329113924, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281362672, Length=474, Percent_Identity=24.0506329113924, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI281362674, Length=474, Percent_Identity=24.0506329113924, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82369; Mature: 82369
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00331 MALIC_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQLRQSALEFHQFPTPGKIQVAPTKPLTTQRDLALAYSPGVTAPCDAIVEDPLNAYKY CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHCCHHHEEE TARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAGIDVFDIEVNELDPDKLV ECCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCCEEEHCCCCEEEEEEECCCCHHHHH DIICSLEPTFGGINLEDIKAPECFYIEKKCRERMGIPVFHDDQHGTAIVAAAAVLNGLRL HHHHCCCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHH VKKEIGEVRVVASGAGAAAIACLDLLVALGVKRENITICDSKGVVFVGRDEKLDESKLRY HHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCHHHHEE AIQDNGWRKLADAMAGADIFMGLSGPRLVSQDMVKSMARDPLILAMANPEPEILPPLVKE EECCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH VRPDAIIGTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKLATVRAIADLAMAEQN CCCCCEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCC DVVASAYGDQELSFGPEYVIPKPFDPRLIVKIAPAVAKAAMDSGVATRPIQDFDAYADQL CEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH AQFVYKTNLFMKPVFAQAKKDPKRVVMTEGEDERVLHATQEIVTQGLAKPILVGRPSVIE HHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCHHHH KRIEKLGLKMRPGVDFELVNNESDPRFNDYWQDYYQLMKRKGVSQEQARRRVIGNTTLIG HHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH AMMVRRGDADALICGTYGPYRQHFDILENVLGYANKDKVAGAMNALILPTGNIFITDTYV HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHCEEEEECCCEEEEEEEE NAEPSAEQLAAITKMAAQSIQRFGIQPKAALLSNSSFGALNTASAQKMRAAFDQIRAAQP CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC ELEIDGEMQGDAALVESIRQQAMPDSTLKGSANLLIMPNVEAANISYNLLRVSASDGVTI CCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEE GPILMGMAKPAHILTPISSVRRIVNMVALASVDAQVAAQQG HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure MDEQLRQSALEFHQFPTPGKIQVAPTKPLTTQRDLALAYSPGVTAPCDAIVEDPLNAYKY CCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHCCHHHEEE TARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAGIDVFDIEVNELDPDKLV ECCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCCEEEHCCCCEEEEEEECCCCHHHHH DIICSLEPTFGGINLEDIKAPECFYIEKKCRERMGIPVFHDDQHGTAIVAAAAVLNGLRL HHHHCCCCCCCCCCHHHCCCCCEEEEHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHH VKKEIGEVRVVASGAGAAAIACLDLLVALGVKRENITICDSKGVVFVGRDEKLDESKLRY HHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCHHHHEE AIQDNGWRKLADAMAGADIFMGLSGPRLVSQDMVKSMARDPLILAMANPEPEILPPLVKE EECCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH VRPDAIIGTGRSDFPNQVNNVLCFPFIFRGALDVGATTINEEMKLATVRAIADLAMAEQN CCCCCEEECCCCCCCHHHHCEEEHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCC DVVASAYGDQELSFGPEYVIPKPFDPRLIVKIAPAVAKAAMDSGVATRPIQDFDAYADQL CEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHH AQFVYKTNLFMKPVFAQAKKDPKRVVMTEGEDERVLHATQEIVTQGLAKPILVGRPSVIE HHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCHHHH KRIEKLGLKMRPGVDFELVNNESDPRFNDYWQDYYQLMKRKGVSQEQARRRVIGNTTLIG HHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHH AMMVRRGDADALICGTYGPYRQHFDILENVLGYANKDKVAGAMNALILPTGNIFITDTYV HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHCEEEEECCCEEEEEEEE NAEPSAEQLAAITKMAAQSIQRFGIQPKAALLSNSSFGALNTASAQKMRAAFDQIRAAQP CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC ELEIDGEMQGDAALVESIRQQAMPDSTLKGSANLLIMPNVEAANISYNLLRVSASDGVTI CCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCEE GPILMGMAKPAHILTPISSVRRIVNMVALASVDAQVAAQQG HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]