| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is oprC [C]
Identifier: 34496350
GI number: 34496350
Start: 921515
End: 923443
Strand: Reverse
Name: oprC [C]
Synonym: CV_0895
Alternate gene names: 34496350
Gene position: 923443-921515 (Counterclockwise)
Preceding gene: 34496356
Following gene: 34496349
Centisome position: 19.44
GC content: 71.49
Gene sequence:
>1929_bases ATGACAATCCGCTATCTGCTCCCCCTGCCGCTCGCGCTGGCCGTCGCCCACGCCTGCGCGGCGGAACCGCCCGCCTTCGT CGGCGAAGAAGTGCTGGTGACCGCCACCCGCCTCGACCAGCCGCTGCAACTGTCGCTGGACCCGCGCGCGCCGCGCCAGC CGGCGCCGGCCGCCGACGGCGCCGCGCTGCTGAAGAACATTCCCGGCTTCAACGTCGCCCGCAAGGGCGGCAGCTCCGGC GATCCGCTGCTGCGCGGCCTGGGCGGCTCGCGTCTGGCCATCCTGGCCGACGGCGGCTTCGTCTTCGGCGGCTGCGGCGG CCGCATGGACCCGCCCACCGCCTACCTGTTCCCCGACGCCTACGACGTGGTGGACGTGGTCAAGGGTCCGCAGAGCGTCA AGCTGGGCCCCGGCCTGGTGGCCGGCGGCGTCAACTTCGAACGCAAGACGCCGCGCTTCGACCAGCCCGGCGTCCGCTTC AACGGCAGCCTGCTGGGCGGCAGCGGCGACCGCAACGACGCCTACGCCGACTTCGCCGCCGGCTCTCAATACGGCTACGC GCGCATCCTGGCCAGCCGCAACCACGGCGGCGACTACCGCGACGGCGACGGCCGCCCGGTGCACTCCGCCTTCGAACGCG ACAGCCAGACCGCCATCGTCGGCCTGACGCCGGGCCGCGACACCACGCTGGAAGTGTCCGCCGACCGCAGCCGCGGCCAG GCCGCCTACGCCGACCGCAGGATGGACGGCAGCCGGTTCGACCGCGACGCCTGGGGCGTCAAGCTGGAGCAGCGCCGGCT CGCCGGCTGGCTGGACGCGCTGCGCCTGCAGCTGAACCACAGCTATGTCGACCACGTGATGGACAACTTCTCGCTGCGTC CAGCGCCGGCGATGAAGATGCTGGGCAATCCCGATCGCGAGGCCGACACCGGCCGGCTGAGCGCCGACCTGGCCTTCGGC GACTGGGAAATCACCGCCGGCTTGGACTGGCTGCGCGACCGCCACAGCAGCCGGGGCGGCGTCGACTACCTGCAGCAGCC GCGCCTGCCGGACATCAGCTTCGACAACCAGGGCCTGTACGCCGAAGCGTCCACACCGCTGGGCGCGCAGGGCAGGCTGA TCGCCGGCCTGCGCCGCGATGCCACCCTGGCGGTGCTGGAGGCCGCATCCAATGGCGGCATCCGCGGCGAAAACCGCTAT CACATGGACTCCGGCTTCGTCCGCTACGAGCTCAAGACCGGCGGCTGGACACATTACGTCGGCCTGGGCCAGGCGCAGCG CGCGCCCGACTACTGGGAACTGAACCGCAACGATGGCCTCGGCAAGGAAGGCAATCTGCAGCTGGACGCCGGCCTGCTGT ACCAGGACGACAAGCTGCAAGGCTCGCTGTCCGCCTACCTGAGCCGCGTCGGCGGCTTCATCCTGGTCGACAACAATAGC CCGCAGATGGCGCGCAACGTCGACGCCCGCCGCTACGGTCTGGAGAGCGAGGCGCGCTGGCGCTTCGCGCCGCAATGGAC GCTGTCCGGCAGCGTGGCCTGGGTCTGGGCGGCCAATCTGGACGACGGCCGGCCGCTGGCGCAGACGCCGCCGCTGGAAG GCAAGCTGGCCCTCAAGTGGGACGATGGCCGCTACGGCGCCGGCGCCGCCTTGCGCGCGGTGCAGCGCCAGGACCGCGTC GCGCCCGGCCAGGGCAATATCGTGGGCCAGGACATCGGCGTCGCGCCCGGTTTCGCCACGCTATCGCTGGACGCGGGCTG GAAGATCAGCAAGCGCTTCAAGCTGCTGGCCGGCGTCGACAATGTGTTCAACCGCGCGTACGCGGAAAGCGTCAGCAAGG GCGGCGCCATGGTGGCCGGCTACACCCGGACCACCCGCGTCAACGAGCCCGGCCGCACGCTGTGGACCAAGCTGCAGCTC GAGCTGTAA
Upstream 100 bases:
>100_bases AAGCCGGCGGCGCGGCGGCTGCGACACTTTGCCGCATTGGTGGCCAGGGCGGCTTCCACTACCATCCCGGGCAATAATTC CAACACAAACCTGTTCCGTG
Downstream 100 bases:
>100_bases ATATCCGTCCGTCCTCTCGTCTCGGGGCTTCCAGTCTGCTAGGCTGGAAGCCTTTTTCACGATGGCGGCGGCATGAAGAT TCCCTATTTCAAGATCCTGG
Product: outer membrane protein OprC complement
Products: NA
Alternate protein names: NB-Dependent Receptor; NB Dependent Receptor; Outer Membrane Copper Receptor; Outer Membrane Copper Receptor OprC; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Protein OprC; Outer Membrane Protein; NB-Dependent Receptor Plug; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Outer Membrane Receptor; Outer Membrane Protein C; Outer Membrane Protein OprC Complement; Outer Membrane Heme Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; Outer Membrane Receptor Protein Mostly Fe Transport; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MTIRYLLPLPLALAVAHACAAEPPAFVGEEVLVTATRLDQPLQLSLDPRAPRQPAPAADGAALLKNIPGFNVARKGGSSG DPLLRGLGGSRLAILADGGFVFGGCGGRMDPPTAYLFPDAYDVVDVVKGPQSVKLGPGLVAGGVNFERKTPRFDQPGVRF NGSLLGGSGDRNDAYADFAAGSQYGYARILASRNHGGDYRDGDGRPVHSAFERDSQTAIVGLTPGRDTTLEVSADRSRGQ AAYADRRMDGSRFDRDAWGVKLEQRRLAGWLDALRLQLNHSYVDHVMDNFSLRPAPAMKMLGNPDREADTGRLSADLAFG DWEITAGLDWLRDRHSSRGGVDYLQQPRLPDISFDNQGLYAEASTPLGAQGRLIAGLRRDATLAVLEAASNGGIRGENRY HMDSGFVRYELKTGGWTHYVGLGQAQRAPDYWELNRNDGLGKEGNLQLDAGLLYQDDKLQGSLSAYLSRVGGFILVDNNS PQMARNVDARRYGLESEARWRFAPQWTLSGSVAWVWAANLDDGRPLAQTPPLEGKLALKWDDGRYGAGAALRAVQRQDRV APGQGNIVGQDIGVAPGFATLSLDAGWKISKRFKLLAGVDNVFNRAYAESVSKGGAMVAGYTRTTRVNEPGRTLWTKLQL EL
Sequences:
>Translated_642_residues MTIRYLLPLPLALAVAHACAAEPPAFVGEEVLVTATRLDQPLQLSLDPRAPRQPAPAADGAALLKNIPGFNVARKGGSSG DPLLRGLGGSRLAILADGGFVFGGCGGRMDPPTAYLFPDAYDVVDVVKGPQSVKLGPGLVAGGVNFERKTPRFDQPGVRF NGSLLGGSGDRNDAYADFAAGSQYGYARILASRNHGGDYRDGDGRPVHSAFERDSQTAIVGLTPGRDTTLEVSADRSRGQ AAYADRRMDGSRFDRDAWGVKLEQRRLAGWLDALRLQLNHSYVDHVMDNFSLRPAPAMKMLGNPDREADTGRLSADLAFG DWEITAGLDWLRDRHSSRGGVDYLQQPRLPDISFDNQGLYAEASTPLGAQGRLIAGLRRDATLAVLEAASNGGIRGENRY HMDSGFVRYELKTGGWTHYVGLGQAQRAPDYWELNRNDGLGKEGNLQLDAGLLYQDDKLQGSLSAYLSRVGGFILVDNNS PQMARNVDARRYGLESEARWRFAPQWTLSGSVAWVWAANLDDGRPLAQTPPLEGKLALKWDDGRYGAGAALRAVQRQDRV APGQGNIVGQDIGVAPGFATLSLDAGWKISKRFKLLAGVDNVFNRAYAESVSKGGAMVAGYTRTTRVNEPGRTLWTKLQL EL >Mature_641_residues TIRYLLPLPLALAVAHACAAEPPAFVGEEVLVTATRLDQPLQLSLDPRAPRQPAPAADGAALLKNIPGFNVARKGGSSGD PLLRGLGGSRLAILADGGFVFGGCGGRMDPPTAYLFPDAYDVVDVVKGPQSVKLGPGLVAGGVNFERKTPRFDQPGVRFN GSLLGGSGDRNDAYADFAAGSQYGYARILASRNHGGDYRDGDGRPVHSAFERDSQTAIVGLTPGRDTTLEVSADRSRGQA AYADRRMDGSRFDRDAWGVKLEQRRLAGWLDALRLQLNHSYVDHVMDNFSLRPAPAMKMLGNPDREADTGRLSADLAFGD WEITAGLDWLRDRHSSRGGVDYLQQPRLPDISFDNQGLYAEASTPLGAQGRLIAGLRRDATLAVLEAASNGGIRGENRYH MDSGFVRYELKTGGWTHYVGLGQAQRAPDYWELNRNDGLGKEGNLQLDAGLLYQDDKLQGSLSAYLSRVGGFILVDNNSP QMARNVDARRYGLESEARWRFAPQWTLSGSVAWVWAANLDDGRPLAQTPPLEGKLALKWDDGRYGAGAALRAVQRQDRVA PGQGNIVGQDIGVAPGFATLSLDAGWKISKRFKLLAGVDNVFNRAYAESVSKGGAMVAGYTRTTRVNEPGRTLWTKLQLE L
Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69391; Mature: 69259
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRYLLPLPLALAVAHACAAEPPAFVGEEVLVTATRLDQPLQLSLDPRAPRQPAPAADG CEEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCC AALLKNIPGFNVARKGGSSGDPLLRGLGGSRLAILADGGFVFGGCGGRMDPPTAYLFPDA HHHHHCCCCCCEECCCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCCCCEEEECCCH YDVVDVVKGPQSVKLGPGLVAGGVNFERKTPRFDQPGVRFNGSLLGGSGDRNDAYADFAA HHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCCCCCEECCEEECCCCCCCCCEEECCC GSQYGYARILASRNHGGDYRDGDGRPVHSAFERDSQTAIVGLTPGRDTTLEVSADRSRGQ CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCC AAYADRRMDGSRFDRDAWGVKLEQRRLAGWLDALRLQLNHSYVDHVMDNFSLRPAPAMKM HHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHH LGNPDREADTGRLSADLAFGDWEITAGLDWLRDRHSSRGGVDYLQQPRLPDISFDNQGLY CCCCCCCCCCCCEEEEEEECCEEEECCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEE AEASTPLGAQGRLIAGLRRDATLAVLEAASNGGIRGENRYHMDSGFVRYELKTGGWTHYV EECCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEEEECCCEEEEE GLGQAQRAPDYWELNRNDGLGKEGNLQLDAGLLYQDDKLQGSLSAYLSRVGGFILVDNNS ECCCCCCCCCCEEECCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHCCEEEEECCC PQMARNVDARRYGLESEARWRFAPQWTLSGSVAWVWAANLDDGRPLAQTPPLEGKLALKW CHHHHCCCHHHCCCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE DDGRYGAGAALRAVQRQDRVAPGQGNIVGQDIGVAPGFATLSLDAGWKISKRFKLLAGVD CCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH NVFNRAYAESVSKGGAMVAGYTRTTRVNEPGRTLWTKLQLEL HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEC >Mature Secondary Structure TIRYLLPLPLALAVAHACAAEPPAFVGEEVLVTATRLDQPLQLSLDPRAPRQPAPAADG EEEEECCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCC AALLKNIPGFNVARKGGSSGDPLLRGLGGSRLAILADGGFVFGGCGGRMDPPTAYLFPDA HHHHHCCCCCCEECCCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCCCCCEEEECCCH YDVVDVVKGPQSVKLGPGLVAGGVNFERKTPRFDQPGVRFNGSLLGGSGDRNDAYADFAA HHHHHHHCCCCCEECCCCEEECCCCCCCCCCCCCCCCCEECCEEECCCCCCCCCEEECCC GSQYGYARILASRNHGGDYRDGDGRPVHSAFERDSQTAIVGLTPGRDTTLEVSADRSRGQ CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCC AAYADRRMDGSRFDRDAWGVKLEQRRLAGWLDALRLQLNHSYVDHVMDNFSLRPAPAMKM HHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHH LGNPDREADTGRLSADLAFGDWEITAGLDWLRDRHSSRGGVDYLQQPRLPDISFDNQGLY CCCCCCCCCCCCEEEEEEECCEEEECCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCEE AEASTPLGAQGRLIAGLRRDATLAVLEAASNGGIRGENRYHMDSGFVRYELKTGGWTHYV EECCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEECCCEEEEEEECCCEEEEE GLGQAQRAPDYWELNRNDGLGKEGNLQLDAGLLYQDDKLQGSLSAYLSRVGGFILVDNNS ECCCCCCCCCCEEECCCCCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHCCEEEEECCC PQMARNVDARRYGLESEARWRFAPQWTLSGSVAWVWAANLDDGRPLAQTPPLEGKLALKW CHHHHCCCHHHCCCCCCCCEEECCCEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEE DDGRYGAGAALRAVQRQDRVAPGQGNIVGQDIGVAPGFATLSLDAGWKISKRFKLLAGVD CCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHH NVFNRAYAESVSKGGAMVAGYTRTTRVNEPGRTLWTKLQLEL HHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA